RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 ROBO1Q9Y6N7 1651 aa1.2□□□□□ -2.22
GAPVD1-211ENST00000467707 A2ML1A8K2U0 1454 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 ZNF518AQ6AHZ1 1483 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 BCL9LQ86UU0 1499 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 RNF17Q9BXT8 1623 aaKnown RBP1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 OR2T8A6NH00 312 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 B4DSR2 109 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 H3BRM9 83 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 NCR3O14931 201 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 IGLV1-51P01701 117 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 ARPP19P56211 112 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 VBP1P61758 197 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 RICTORQ6R327 1708 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 ARPINQ7Z6K5 226 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 GKN2Q86XP6 184 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 STX19Q8N4C7 294 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 CFAP74Q9C0B2 1584 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 YTHDC2Q9H6S0 1430 aaKnown RBP1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 XIRP1Q702N8 1843 aaKnown RBP1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 ZNF142P52746 1687 aaPredicted RBP1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 ABCC1P33527 1531 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 ARHGAP5Q13017 1502 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 CDK13Q14004 1512 aaKnown RBP1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 UGGT2Q9NYU1 1516 aa1.19□□□□□ -2.22
GAPVD1-211ENST00000467707 NHSL1Q5SYE7 1610 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 LRRC9Q6ZRR7 1453 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 UTRNP46939 3433 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 PHLPP1O60346 1717 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 FGD6Q6ZV73 1430 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 GPR31O00270 319 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 RER1O15258 196 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 CXCL1P09341 107 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 SPRNQ5BIV9 151 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 CROCCP2Q86T23 111 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 AGLP35573 1532 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 KDM5DQ9BY66 1539 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 MYO3AQ8NEV4 1616 aa1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 POLR1AO95602 1720 aaPredicted RBP1.18□□□□□ -2.22
GAPVD1-211ENST00000467707 NWD1Q149M9 1564 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 UGGT1Q9NYU2 1555 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 DIP2CQ9Y2E4 1556 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 LAMB4A4D0S4 1761 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 LYRM1O43325 122 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 SERPINB1P30740 379 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 RTL8BQ17RB0 113 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 TRIQKQ629K1 86 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 C3orf33Q6P1S2 294 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 Q8TAT8 98 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 GID8Q9NWU2 228 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 HSPB8Q9UJY1 196 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 BIVM-ERCC5R4GMW8 1640 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 RFX7Q2KHR2 1363 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 MED14O60244 1454 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 A2MP01023 1474 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 NLRP1Q9C000 1473 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 MLH3Q9UHC1 1453 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 SYNMO15061 1565 aa1.17□□□□□ -2.22
GAPVD1-211ENST00000467707 IQGAP1P46940 1657 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 CLTCQ00610 1675 aaKnown RBP1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 CLIP1P30622 1438 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 EML6Q6ZMW3 1958 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 ABCA6Q8N139 1617 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 FCGBPQ9Y6R7 5405 aaPredicted RBP1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 hDV103S1A0JD37 113 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 PPP5D1E7EU14 171 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 CST7O76096 145 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 CSN2P05814 226 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 IDO1P14902 403 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 RPL35P42766 123 aaKnown RBP1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 HBBP68871 147 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 PRB3Q04118 309 aaPredicted RBP1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 LRRC18Q8N456 261 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 GGACTQ9BVM4 153 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 OR2H1Q9GZK4 316 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 TMEM138Q9NPI0 162 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 KDM5CP41229 1560 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 ITSN2Q9NZM3 1697 aa1.16□□□□□ -2.22
GAPVD1-211ENST00000467707 PCNTO95613 3336 aa1.15□□□□□ -2.22
GAPVD1-211ENST00000467707 PRDM15P57071 1507 aaPredicted RBP1.15□□□□□ -2.22
GAPVD1-211ENST00000467707 ATP7AQ04656 1500 aa1.15□□□□□ -2.22
GAPVD1-211ENST00000467707 DEPDC5O75140 1603 aa1.15□□□□□ -2.22
GAPVD1-211ENST00000467707 H3BQV1 296 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 FKBP1CQ5VVH2 108 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 NEK7Q8TDX7 302 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 HOPXQ9BPY8 73 aaPredicted RBP1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 TMEM2Q9UHN6 1383 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 PZPP20742 1482 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 NCOA2Q15596 1464 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 RALGAPBQ86X10 1494 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 NRKQ7Z2Y5 1582 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 MROH2AA6NES4 1674 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 MYOM1P52179 1685 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 TRPM1Q7Z4N2 1603 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 ABCC3O15438 1527 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 MAP3K1Q13233 1512 aa1.15□□□□□ -2.23
GAPVD1-211ENST00000467707 GOLGB1Q14789 3259 aaKnown RBP1.14□□□□□ -2.23
GAPVD1-211ENST00000467707 SHPRHQ149N8 1683 aa1.14□□□□□ -2.23
GAPVD1-211ENST00000467707 TIAM1Q13009 1591 aa1.14□□□□□ -2.23
GAPVD1-211ENST00000467707 DIP2AQ14689 1571 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms