RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 WI2-2373I1.2A0A1W2PRP0 233 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 PLP1P60201 277 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 OCC1Q8TAD7 63 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 A0A1W2PRE2 83 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 HELTA6NFD8 242 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 LINC00587B1AMM8 73 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 GCGP01275 180 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 C8orf88P0DMB2 117 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 CD33P20138 364 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 GATA2P23769 480 aaPredicted RBP11.24□□□□□ -0.61
DDX56-208ENST00000467318 COX19Q49B96 90 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 GFI1BQ5VTD9 330 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 SPATA31B1PQ5VZV4 182 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 MIR17HGQ75NE6 70 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 HIST1H2BLQ99880 126 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 TRAPPC1Q9Y5R8 145 aa11.24□□□□□ -0.61
DDX56-208ENST00000467318 DNHD1Q96M86 4753 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 ANK2Q01484 3957 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 S100A7P31151 101 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 CNN1P51911 297 aaKnown RBP11.23□□□□□ -0.61
DDX56-208ENST00000467318 S100A7AQ86SG5 101 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 TMEM37Q8WXS4 190 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 TMEM18Q96B42 140 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 METTL26Q96S19 204 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
DDX56-208ENST00000467318 DNAJC4Q9NNZ3 241 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 SIGLEC8Q9NYZ4 499 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
DDX56-208ENST00000467318 MRPL27Q9P0M9 148 aaKnown RBP11.23□□□□□ -0.61
DDX56-208ENST00000467318 IGHV3OR16-8A0A075B7F1 116 aa11.22□□□□□ -0.61
DDX56-208ENST00000467318 TMEM213A2RRL7 107 aa11.22□□□□□ -0.61
DDX56-208ENST00000467318 LYZP61626 148 aa11.22□□□□□ -0.61
DDX56-208ENST00000467318 USF2Q15853 346 aaPredicted RBP11.22□□□□□ -0.61
DDX56-208ENST00000467318 TM4SF20Q53R12 229 aa11.22□□□□□ -0.61
DDX56-208ENST00000467318 RABAC1Q9UI14 185 aa11.22□□□□□ -0.61
DDX56-208ENST00000467318 C2orf70A6NJV1 201 aa11.21□□□□□ -0.61
DDX56-208ENST00000467318 HYPMO75409 117 aa11.21□□□□□ -0.61
DDX56-208ENST00000467318 OR10J4P0C629 311 aa11.21□□□□□ -0.61
DDX56-208ENST00000467318 ORM2P19652 201 aa11.21□□□□□ -0.61
DDX56-208ENST00000467318 CBLN1P23435 193 aa11.21□□□□□ -0.61
DDX56-208ENST00000467318 CRYBB3P26998 211 aa11.21□□□□□ -0.61
DDX56-208ENST00000467318 BMI1P35226 326 aa11.21□□□□□ -0.61
DDX56-208ENST00000467318 JOSD1Q15040 202 aaPredicted RBP11.21□□□□□ -0.61
DDX56-208ENST00000467318 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.61
DDX56-208ENST00000467318 PRR31Q5SQ13 230 aa11.21□□□□□ -0.61
DDX56-208ENST00000467318 A0A1W2PS18 150 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 OR7C2O60412 319 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 GNG4P50150 75 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 INSL3P51460 131 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 OR1B1Q8NGR6 318 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 TRBV20OR9-2A0A075B6H5 130 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 IGHV7-4-1A0A0J9YVY3 117 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 ZNF207O43670 478 aaKnown RBP11.2□□□□□ -0.62
DDX56-208ENST00000467318 GATCO43716 136 aaKnown RBP11.2□□□□□ -0.62
DDX56-208ENST00000467318 CSN3P07498 182 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 TAS2R60P59551 318 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 PKIAP61925 76 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 STXBP6Q8NFX7 210 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 OSTCQ9NRP0 149 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 RNF24Q9Y225 148 aa11.2□□□□□ -0.62
DDX56-208ENST00000467318 COX7A2P2O60397 106 aa11.19□□□□□ -0.62
DDX56-208ENST00000467318 AMBPP02760 352 aa11.19□□□□□ -0.62
DDX56-208ENST00000467318 HIGD1AQ9Y241 93 aa11.19□□□□□ -0.62
DDX56-208ENST00000467318 U3KQE9 123 aa11.19□□□□□ -0.62
DDX56-208ENST00000467318 TSTD3H0UI37 97 aa11.18□□□□□ -0.62
DDX56-208ENST00000467318 C9orf66Q5T8R8 295 aa11.18□□□□□ -0.62
DDX56-208ENST00000467318 C10orf113Q5VZT2 155 aa11.18□□□□□ -0.62
DDX56-208ENST00000467318 GRAMD2BQ96HH9 432 aa11.18□□□□□ -0.62
DDX56-208ENST00000467318 RHPN1-AS1Q9BWJ2 59 aa11.18□□□□□ -0.62
DDX56-208ENST00000467318 AURKAIP1Q9NWT8 199 aaPredicted RBP11.18□□□□□ -0.62
DDX56-208ENST00000467318 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 BUB3O43684 328 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 SAP30O75446 220 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 ERVFC1-1P60608 527 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 WDR73Q6P4I2 378 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 ADAMTSL5Q6ZMM2 481 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
DDX56-208ENST00000467318 PKD1L1Q8TDX9 2849 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 ISLRO14498 428 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 CHEK1O14757 476 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 CENPWQ5EE01 88 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 C1orf194Q5T5A4 169 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 LINC00305Q7Z4B0 112 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 DYNLRB2Q8TF09 96 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 ZNF503Q96F45 646 aa11.17□□□□□ -0.62
DDX56-208ENST00000467318 K7EN84 100 aa11.16□□□□□ -0.62
DDX56-208ENST00000467318 APOHP02749 345 aaPredicted RBP11.16□□□□□ -0.62
DDX56-208ENST00000467318 MT-ND6P03923 174 aa11.16□□□□□ -0.62
DDX56-208ENST00000467318 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
DDX56-208ENST00000467318 DEFA6Q01524 100 aa11.16□□□□□ -0.62
DDX56-208ENST00000467318 GBGT1Q8N5D6 347 aa11.16□□□□□ -0.62
DDX56-208ENST00000467318 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
DDX56-208ENST00000467318 PAXXQ9BUH6 204 aa11.16□□□□□ -0.62
DDX56-208ENST00000467318 GNB1LQ9BYB4 327 aa11.16□□□□□ -0.62
DDX56-208ENST00000467318 IGHV3-49A0A0A0MS15 119 aa11.15□□□□□ -0.62
DDX56-208ENST00000467318 H3BRN7 92 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms