RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 GRAMD2BQ96HH9 432 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 UBE2E2Q96LR5 201 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 YAE1D1Q9NRH1 226 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 SERTAD4Q9NUC0 356 aa7.3□□□□□ -1.24
APOBEC1-202ENST00000467171 A0A1W2PPQ1 181 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 ZNF320A2RRD8 509 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 RBAKDNA6NC62 111 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 C19orf71A6NCJ1 209 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 PHOX2AO14813 284 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 APOHP02749 345 aaPredicted RBP7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 LGALS1P09382 135 aaKnown RBP7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 RPL19P84098 196 aaKnown RBP7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 FAM106AQ4KMX7 169 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 NUDT10Q8NFP7 164 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 NUDT11Q96G61 164 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 RNASE7Q9H1E1 156 aaKnown RBP7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 RPH3ALQ9UNE2 315 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 PSG8Q9UQ74 426 aa7.29□□□□□ -1.24
APOBEC1-202ENST00000467171 ITPR3Q14573 2671 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 IGHV3OR16-8A0A075B7F1 116 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 ZNF705GA8MUZ8 300 aaPredicted RBP7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 NPIPB6E9PJ23 425 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 M0R3E3 92 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 CHEK1O14757 476 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 GATCO43716 136 aaKnown RBP7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 TRGC2P03986 189 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 BMI1P35226 326 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 RPEL1Q2QD12 228 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 COX19Q49B96 90 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 SAPCD1Q5SSQ6 148 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 LCN12Q6JVE5 192 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 LCNL1Q6ZST4 164 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 IL17RELQ6ZVW7 336 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 REC114Q7Z4M0 266 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 OR4B1Q8NGF8 309 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 DAZ1Q9NQZ3 744 aaKnown RBP7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 UFC1Q9Y3C8 167 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 PDZD2O15018 2839 aa7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 MAP1AP78559 2803 aaPredicted RBP7.28□□□□□ -1.24
APOBEC1-202ENST00000467171 ZANQ9Y493 2812 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 TRAV8-1A0A0A6YYK1 113 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 TRAV8-2A0A0B4J237 113 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 FAM231BA6NCW3 169 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 C5orf52A6NGY3 159 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 DNAJC9-AS1A6NH13 148 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 LGALS9O00182 355 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 ZNF207O43670 478 aaKnown RBP7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 ACTL10Q5JWF8 245 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 SAMD13Q5VXD3 122 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 C10orf99Q6UWK7 81 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 PRNTQ86SH4 94 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 ZFP82Q8N141 532 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 NHLRC2Q8NBF2 726 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 TSKUQ8WUA8 353 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 SGK494Q96LW2 274 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 GFRA4Q9GZZ7 299 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 SMPXQ9UHP9 88 aa7.27□□□□□ -1.25
APOBEC1-202ENST00000467171 IGHV3OR16-13A0A075B7E8 117 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 IGHV3-74A0A0B4J1X5 117 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 IGHV3-66A0A0C4DH42 116 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 IZUMO1RA6ND01 250 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 A8MWP6 167 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 SOCS3O14543 225 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 S100A6P06703 90 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 RNASE1P07998 156 aaKnown RBP7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 RASL11AQ6T310 242 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 LINC00322Q6ZN03 302 aaPredicted RBP7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 Q6ZSV7 163 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 GBGT1Q8N5D6 347 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 WIPF2Q8TF74 440 aaPredicted RBP7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 DAZAP1Q96EP5 407 aaKnown RBP7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 RHPN1-AS1Q9BWJ2 59 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 RPP21Q9H633 154 aaKnown RBP7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 PPP1R14DQ9NXH3 145 aa7.26□□□□□ -1.25
APOBEC1-202ENST00000467171 FASNP49327 2511 aaKnown RBP7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 CSMD1Q96PZ7 3565 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 IGHV3-49A0A0A0MS15 119 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 A8MWL6 223 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST1H2BKO60814 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 P01737 135 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST1H2BJP06899 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST1H2BOP23527 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST1H2BBP33778 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 CDX1P47902 265 aaPredicted RBP7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST1H2BDP58876 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST1H2BCP62807 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST2H2BEQ16778 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 PRR27Q6MZM9 219 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 KLHDC1Q8N7A1 406 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 FRZBQ92765 325 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST1H2BHQ93079 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 DUX5Q96PT3 197 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 PRR25Q96S07 402 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST1H2BNQ99877 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 HIST1H2BMQ99879 126 aa7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 SAV1Q9H4B6 383 aaPredicted RBP7.25□□□□□ -1.25
APOBEC1-202ENST00000467171 C16orf95Q9H693 158 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms