RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ZNF705FA8MVS1 300 aaPredicted RBP8.26□□□□□ -1.09
VCP-204ENST00000466100 OR11H12B2RN74 326 aa8.26□□□□□ -1.09
VCP-204ENST00000466100 PRAC2D3DTV9 90 aa8.26□□□□□ -1.09
VCP-204ENST00000466100 PAGE4O60829 102 aa8.26□□□□□ -1.09
VCP-204ENST00000466100 DEFB131AP59861 70 aa8.26□□□□□ -1.09
VCP-204ENST00000466100 DEFB1P60022 68 aa8.26□□□□□ -1.09
VCP-204ENST00000466100 ZNF124Q15973 351 aa8.26□□□□□ -1.09
VCP-204ENST00000466100 CLLU1Q5K131 121 aa8.26□□□□□ -1.09
VCP-204ENST00000466100 LINC00052Q96N35 136 aa8.26□□□□□ -1.09
VCP-204ENST00000466100 GNG13Q9P2W3 67 aa8.26□□□□□ -1.09
VCP-204ENST00000466100 FBN3Q75N90 2809 aa8.25□□□□□ -1.09
VCP-204ENST00000466100 BCL2P10415 239 aa8.25□□□□□ -1.09
VCP-204ENST00000466100 ATP5G3P48201 142 aa8.25□□□□□ -1.09
VCP-204ENST00000466100 CMC4P56277 68 aaPredicted RBP8.25□□□□□ -1.09
VCP-204ENST00000466100 GDF5OSQ5U4N7 250 aa8.25□□□□□ -1.09
VCP-204ENST00000466100 GTSCR1Q86UQ5 136 aa8.25□□□□□ -1.09
VCP-204ENST00000466100 APRG1Q8IVJ8 170 aa8.25□□□□□ -1.09
VCP-204ENST00000466100 ARL6IP6Q8N6S5 226 aa8.25□□□□□ -1.09
VCP-204ENST00000466100 RPUSD4Q96CM3 377 aaKnown RBP8.25□□□□□ -1.09
VCP-204ENST00000466100 CITED4Q96RK1 184 aa8.25□□□□□ -1.09
VCP-204ENST00000466100 AAMDCQ9H7C9 122 aa8.25□□□□□ -1.09
VCP-204ENST00000466100 A0A0J9YX75 114 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 LOC102723971A0A1B0GUV8 181 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 PGPA6NDG6 321 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 A8MTW9 85 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 F6UB75 175 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 PRB4P10163 310 aaPredicted RBP8.24□□□□□ -1.09
VCP-204ENST00000466100 HLA-DRB4P13762 266 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 SUMO1P63165 101 aaKnown RBP8.24□□□□□ -1.09
VCP-204ENST00000466100 GNG5P63218 68 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 FOXI2Q6ZQN5 318 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 DEFB125Q8N687 156 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 C5orf17Q8NAS9 161 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 ZNF738Q8NE65 137 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 NKX6-2Q9C056 277 aaPredicted RBP8.24□□□□□ -1.09
VCP-204ENST00000466100 SAV1Q9H4B6 383 aaPredicted RBP8.24□□□□□ -1.09
VCP-204ENST00000466100 AURKAIP1Q9NWT8 199 aaPredicted RBP8.24□□□□□ -1.09
VCP-204ENST00000466100 HLA-DRB4X5D2U9 266 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 HUWE1Q7Z6Z7 4374 aaKnown RBP8.24□□□□□ -1.09
VCP-204ENST00000466100 TENM3Q9P273 2699 aa8.24□□□□□ -1.09
VCP-204ENST00000466100 KNCNA6PVL3 124 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 DIRC3C9JPN6 131 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 C11orf94C9JXX5 98 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 IFNA1P01562 189 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 SLC25A5P05141 298 aaKnown RBP8.23□□□□□ -1.09
VCP-204ENST00000466100 RAB14P61106 215 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 MEF2BQ02080 365 aaPredicted RBP8.23□□□□□ -1.09
VCP-204ENST00000466100 HAGHQ16775 308 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 ZNF506Q5JVG8 444 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 CST9LP1Q5W188 147 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 OR8A1Q8NGG7 326 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 FAM210AQ96ND0 272 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 TXNDC17Q9BRA2 123 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 TCEAL7Q9BRU2 100 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 EPDR1Q9UM22 224 aa8.23□□□□□ -1.09
VCP-204ENST00000466100 IGKV2-40A0A087WW87 121 aaPredicted RBP8.22□□□□□ -1.09
VCP-204ENST00000466100 RBMY1BA6NDE4 496 aaKnown RBP8.22□□□□□ -1.09
VCP-204ENST00000466100 RBMY1EA6NEQ0 496 aaKnown RBP8.22□□□□□ -1.09
VCP-204ENST00000466100 RBFOX3A6NFN3 312 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 H3BMM0 161 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 IGKV2D-40P01614 121 aaPredicted RBP8.22□□□□□ -1.09
VCP-204ENST00000466100 TCRAP04437 139 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 RBMY1DP0C7P1 496 aaKnown RBP8.22□□□□□ -1.09
VCP-204ENST00000466100 TAGLN2P37802 199 aaKnown RBP8.22□□□□□ -1.09
VCP-204ENST00000466100 TOR2AQ5JU69 321 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 ACTL10Q5JWF8 245 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 TRPT1Q86TN4 253 aaKnown RBP8.22□□□□□ -1.09
VCP-204ENST00000466100 RXFP4Q8TDU9 374 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 C11orf52Q96A22 123 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 CLUHP3Q96NS8 147 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 RARRES2Q99969 163 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 VAX2Q9UIW0 290 aa8.22□□□□□ -1.09
VCP-204ENST00000466100 SCO2A0A1W2PP80 73 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 RBAKDNA6NC62 111 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 A8MZ25 164 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 K7EIL1 84 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 PEX7O00628 323 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 NDUFS6O75380 124 aaKnown RBP8.21□□□□□ -1.1
VCP-204ENST00000466100 IGLV2-11P01706 119 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 PRB2P02812 416 aaPredicted RBP8.21□□□□□ -1.1
VCP-204ENST00000466100 ZNF705DP0CH99 300 aaPredicted RBP8.21□□□□□ -1.1
VCP-204ENST00000466100 ZNF705BP0CI00 300 aaPredicted RBP8.21□□□□□ -1.1
VCP-204ENST00000466100 IGHV4-30-4P0DP06 118 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 CSN1S1P47710 185 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 CNN1P51911 297 aaKnown RBP8.21□□□□□ -1.1
VCP-204ENST00000466100 AMTNQ6UX39 209 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 C9orf47Q6ZRZ4 202 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 GOLT1AQ6ZVE7 132 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 CYB561D1Q8N8Q1 229 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 CMTM2Q8TAZ6 248 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 C2CD4CQ8TF44 421 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 HIST1H2BAQ96A08 127 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 VGLL1Q99990 258 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 ATG101Q9BSB4 218 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 SRD5A3Q9H8P0 318 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 MED9Q9NWA0 146 aa8.21□□□□□ -1.1
VCP-204ENST00000466100 SERTM2A0A1B0GWG4 89 aa8.2□□□□□ -1.1
VCP-204ENST00000466100 DUSP14O95147 198 aaKnown RBP8.2□□□□□ -1.1
VCP-204ENST00000466100 HIST1H1AQ02539 215 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms