RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 HBBP68871 147 aa0.4□□□□□ -2.35
LRCH3-211ENST00000466054 POU6F1Q14863 301 aa0.4□□□□□ -2.35
LRCH3-211ENST00000466054 MSMO1Q15800 293 aa0.4□□□□□ -2.35
LRCH3-211ENST00000466054 FOXI2Q6ZQN5 318 aa0.4□□□□□ -2.35
LRCH3-211ENST00000466054 FAM216BQ8N7L0 139 aa0.4□□□□□ -2.35
LRCH3-211ENST00000466054 OR2H1Q9GZK4 316 aa0.4□□□□□ -2.35
LRCH3-211ENST00000466054 JPT1Q9UK76 154 aa0.4□□□□□ -2.35
LRCH3-211ENST00000466054 ZNF727A8MUV8 499 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 FXYD6P3P58550 94 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 FXYD4P59646 89 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 MIR22HGQ0VDD5 57 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 FKBP1CQ5VVH2 108 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 PLEKHB2Q96CS7 222 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 CST11Q9H112 138 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 SS18L2Q9UHA2 77 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 LAMTOR3Q9UHA4 124 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 BOKQ9UMX3 212 aaPredicted RBP0.39□□□□□ -2.35
LRCH3-211ENST00000466054 FRAS1Q86XX4 4008 aa0.39□□□□□ -2.35
LRCH3-211ENST00000466054 RTL9Q8NET4 1388 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 A0A0J9YY99 117 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 MFSD11O43934 449 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 PIAS1O75925 651 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 CST7O76096 145 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 CSN2P05814 226 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 ZNF137PP52743 207 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 GNG3P63215 75 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 OCIAD2Q56VL3 154 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 Q6ZQY7 126 aa0.38□□□□□ -2.35
LRCH3-211ENST00000466054 NUPR2A6NF83 97 aa0.37□□□□□ -2.35
LRCH3-211ENST00000466054 CCL4P13236 92 aa0.37□□□□□ -2.35
LRCH3-211ENST00000466054 SPINT3P49223 89 aa0.37□□□□□ -2.35
LRCH3-211ENST00000466054 SPINK7P58062 85 aa0.37□□□□□ -2.35
LRCH3-211ENST00000466054 RTL8BQ17RB0 113 aa0.37□□□□□ -2.35
LRCH3-211ENST00000466054 NEK7Q8TDX7 302 aa0.37□□□□□ -2.35
LRCH3-211ENST00000466054 AP3S1Q92572 193 aa0.37□□□□□ -2.35
LRCH3-211ENST00000466054 MCEEQ96PE7 176 aa0.37□□□□□ -2.35
LRCH3-211ENST00000466054 USP24Q9UPU5 2620 aa0.37□□□□□ -2.35
LRCH3-211ENST00000466054 A6NN06 94 aa0.36□□□□□ -2.35
LRCH3-211ENST00000466054 TCTAP57738 103 aa0.36□□□□□ -2.35
LRCH3-211ENST00000466054 BASP1P80723 227 aaKnown RBP0.36□□□□□ -2.35
LRCH3-211ENST00000466054 DIAPH2-AS1Q14236 149 aa0.36□□□□□ -2.35
LRCH3-211ENST00000466054 CROCCP2Q86T23 111 aa0.36□□□□□ -2.35
LRCH3-211ENST00000466054 LINC00269Q8N2A0 174 aa0.36□□□□□ -2.35
LRCH3-211ENST00000466054 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
LRCH3-211ENST00000466054 KIAA1107Q9UPP5 1409 aa0.36□□□□□ -2.35
LRCH3-211ENST00000466054 APCP25054 2843 aa0.36□□□□□ -2.35
LRCH3-211ENST00000466054 H3BQV1 296 aa0.35□□□□□ -2.35
LRCH3-211ENST00000466054 PDE6GP18545 87 aa0.35□□□□□ -2.35
LRCH3-211ENST00000466054 MRPS36P82909 103 aaKnown RBP0.35□□□□□ -2.35
LRCH3-211ENST00000466054 VMA21Q3ZAQ7 101 aa0.35□□□□□ -2.35
LRCH3-211ENST00000466054 LYG2Q86SG7 212 aa0.35□□□□□ -2.35
LRCH3-211ENST00000466054 SMIM20Q8N5G0 67 aa0.35□□□□□ -2.35
LRCH3-211ENST00000466054 RMND5BQ96G75 393 aaPredicted RBP0.35□□□□□ -2.35
LRCH3-211ENST00000466054 EFCAB11Q9BUY7 163 aa0.35□□□□□ -2.35
LRCH3-211ENST00000466054 TPRKBQ9Y3C4 175 aa0.35□□□□□ -2.35
LRCH3-211ENST00000466054 KPNA4O00629 521 aaPredicted RBP0.34□□□□□ -2.36
LRCH3-211ENST00000466054 LTC4SQ16873 150 aa0.34□□□□□ -2.36
LRCH3-211ENST00000466054 C6orf52Q5T4I8 152 aa0.34□□□□□ -2.36
LRCH3-211ENST00000466054 C10orf111Q8N326 155 aa0.34□□□□□ -2.36
LRCH3-211ENST00000466054 ZDBF2Q9HCK1 2354 aa0.34□□□□□ -2.36
LRCH3-211ENST00000466054 SPTBP11277 2137 aa0.34□□□□□ -2.36
LRCH3-211ENST00000466054 ASH1LQ9NR48 2969 aaKnown RBP0.33□□□□□ -2.36
LRCH3-211ENST00000466054 NAV3Q8IVL0 2385 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 MYH3P11055 1940 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 YTHDC2Q9H6S0 1430 aaKnown RBP0.33□□□□□ -2.36
LRCH3-211ENST00000466054 KDELR1P24390 212 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 TAS2R41P59536 307 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 RPL37AP61513 92 aaKnown RBP0.33□□□□□ -2.36
LRCH3-211ENST00000466054 PRR15Q8IV56 129 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 CCL4L1Q8NHW4 92 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 GRPEL2Q8TAA5 225 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 OR4C12Q96R67 309 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 CCL19Q99731 98 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 LIMD2Q9BT23 127 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 BIN3Q9NQY0 253 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 UFC1Q9Y3C8 167 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 NUBP2Q9Y5Y2 271 aa0.33□□□□□ -2.36
LRCH3-211ENST00000466054 TRAPPC8Q9Y2L5 1435 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 MT-ND6P03923 174 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 KRTAP2-3P0C7H8 128 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 FABP4P15090 132 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 GLRXP35754 106 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 ZCCHC23Q6ZST2 131 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 Q86TA4 180 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 STX19Q8N4C7 294 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 OR4B1Q8NGF8 309 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 PLAC4Q8WY50 150 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 BORCS8Q96FH0 119 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 FAM103A1Q9BTL3 118 aaKnown RBP0.32□□□□□ -2.36
LRCH3-211ENST00000466054 KRTAP2-4Q9BYR9 128 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 KRTAP2-1Q9BYU5 128 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 BOLA2Q9H3K6 86 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 OTORQ9NRC9 128 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 IL20Q9NYY1 176 aa0.32□□□□□ -2.36
LRCH3-211ENST00000466054 IGHV3-30P01768 117 aa0.31□□□□□ -2.36
LRCH3-211ENST00000466054 IGHV3-30-5P0DP03 117 aa0.31□□□□□ -2.36
LRCH3-211ENST00000466054 FAM24BQ8N5W8 94 aa0.31□□□□□ -2.36
LRCH3-211ENST00000466054 DIRC1Q969H9 104 aa0.31□□□□□ -2.36
LRCH3-211ENST00000466054 ISOC1Q96CN7 298 aa0.31□□□□□ -2.36
LRCH3-211ENST00000466054 CARD19Q96LW7 228 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms