RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 Q8TAT8 98 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 FOXC2Q99958 501 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 CNOT1A5YKK6 2376 aaKnown RBP10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 GVINP1Q7Z2Y8 2422 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 ZGRF1Q86YA3 2104 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 NPIPB5A8MRT5 1133 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 PAX8Q06710 450 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 SIGLEC15Q6ZMC9 328 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 PHLDA1Q8WV24 401 aaPredicted RBP10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 PLSCR4Q9NRQ2 329 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 TRAV26-1A0A087WT03 109 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 IGKV2-40A0A087WW87 121 aaPredicted RBP10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 K7EQM0 130 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 SH2D1AO60880 128 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 IGKV2D-40P01614 121 aaPredicted RBP10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 LYPD2Q6UXB3 125 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 ZNF493Q6ZR52 646 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 ZNF479Q96JC4 524 aa10.98□□□□□ -0.65
TGFBR3-204ENST00000465892 MAPKAPK5-AS1Q8N8E1 139 aa10.97□□□□□ -0.65
TGFBR3-204ENST00000465892 IGFBPL1Q8WX77 278 aa10.97□□□□□ -0.65
TGFBR3-204ENST00000465892 CCL17Q92583 94 aa10.97□□□□□ -0.65
TGFBR3-204ENST00000465892 LINC00574Q9H8X3 128 aa10.97□□□□□ -0.65
TGFBR3-204ENST00000465892 IGLL5B9A064 214 aa10.97□□□□□ -0.65
TGFBR3-204ENST00000465892 ODF1Q14990 250 aa10.97□□□□□ -0.65
TGFBR3-204ENST00000465892 FAM169BQ8N8A8 192 aa10.97□□□□□ -0.65
TGFBR3-204ENST00000465892 CACNA1BQ00975 2339 aa10.96□□□□□ -0.65
TGFBR3-204ENST00000465892 TRAV40A0A0B4J280 105 aa10.96□□□□□ -0.65
TGFBR3-204ENST00000465892 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.65
TGFBR3-204ENST00000465892 IL4P05112 153 aa10.96□□□□□ -0.65
TGFBR3-204ENST00000465892 HOXB4P17483 251 aaPredicted RBP10.96□□□□□ -0.65
TGFBR3-204ENST00000465892 KLF17Q5JT82 389 aaPredicted RBP10.96□□□□□ -0.65
TGFBR3-204ENST00000465892 DKK4Q9UBT3 224 aa10.96□□□□□ -0.65
TGFBR3-204ENST00000465892 ASH1LQ9NR48 2969 aaKnown RBP10.96□□□□□ -0.65
TGFBR3-204ENST00000465892 TMEM8BA6NDV4 472 aa10.96□□□□□ -0.66
TGFBR3-204ENST00000465892 PRR33A8MZF0 331 aa10.96□□□□□ -0.66
TGFBR3-204ENST00000465892 IGKV1-17P01599 117 aa10.96□□□□□ -0.66
TGFBR3-204ENST00000465892 EGR2P11161 476 aaPredicted RBP10.96□□□□□ -0.66
TGFBR3-204ENST00000465892 FOXI2Q6ZQN5 318 aa10.96□□□□□ -0.66
TGFBR3-204ENST00000465892 CEND1Q8N111 149 aa10.96□□□□□ -0.66
TGFBR3-204ENST00000465892 FDCSPQ8NFU4 85 aa10.96□□□□□ -0.66
TGFBR3-204ENST00000465892 FBXL15Q9H469 300 aa10.96□□□□□ -0.66
TGFBR3-204ENST00000465892 ZNF474Q6S9Z5 364 aaPredicted RBP10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 C20orf78Q9BR46 151 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 U3KQK5 164 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 IGHV3OR16-8A0A075B7F1 116 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 A0A1B0GW15 77 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 PRRG2O14669 202 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 IGKCP01834 107 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 SMPXQ9UHP9 88 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 GATA4P43694 442 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 GATD1Q8NB37 220 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 SCNM1Q9BWG6 230 aa10.95□□□□□ -0.66
TGFBR3-204ENST00000465892 TECTAO75443 2155 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 J3QR89 54 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 LAMTOR5O43504 91 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 ZNF80P51504 273 aaPredicted RBP10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 DCHS2Q6V1P9 2916 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 IGLV3-9A0A075B6K5 115 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 E9PLD3 99 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 F8W1H4 67 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 PLGLAQ15195 96 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 Q6AWC8 147 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 SEM1Q6ZVN7 128 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 TMEM158Q8WZ71 300 aa10.94□□□□□ -0.66
TGFBR3-204ENST00000465892 A0A1B0GWB2 263 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 ORM1P02763 201 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 CRYBA4P53673 196 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 FAM27E3Q08E93 113 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 TMEM14CQ9P0S9 112 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 NDUFA3O95167 84 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 IGHG3P01860 377 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 C12orf74Q32Q52 190 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 ARRDC1-AS1Q9H2J1 176 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 SIGLEC9Q9Y336 463 aa10.93□□□□□ -0.66
TGFBR3-204ENST00000465892 HLA-DMBP28068 263 aa10.92□□□□□ -0.66
TGFBR3-204ENST00000465892 SCGB2A2Q13296 93 aa10.92□□□□□ -0.66
TGFBR3-204ENST00000465892 SHANK2-AS3Q9BTD1 123 aa10.92□□□□□ -0.66
TGFBR3-204ENST00000465892 MAP1LC3AQ9H492 121 aa10.92□□□□□ -0.66
TGFBR3-204ENST00000465892 MRPL35Q9NZE8 188 aaKnown RBP10.92□□□□□ -0.66
TGFBR3-204ENST00000465892 SCGB1A1P11684 91 aa10.92□□□□□ -0.66
TGFBR3-204ENST00000465892 PPP1R27Q86WC6 154 aa10.92□□□□□ -0.66
TGFBR3-204ENST00000465892 PRSS33Q8NF86 280 aa10.92□□□□□ -0.66
TGFBR3-204ENST00000465892 COL27A1Q8IZC6 1860 aaPredicted RBP10.92□□□□□ -0.66
TGFBR3-204ENST00000465892 TEX22C9J3V5 150 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 NDUFS8O00217 210 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 CNIH1O95406 144 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 SVIPQ8NHG7 77 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 IGHV3-35A0A0C4DH35 117 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 I3L2K1 104 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 TNFRSF6BO95407 300 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 IGHV3-23P01764 117 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 ZNF491Q8N8L2 437 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 RNF125Q96EQ8 232 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 AAMDCQ9H7C9 122 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 TM2D2Q9BX73 214 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 HIGD1BQ9P298 99 aa10.91□□□□□ -0.66
TGFBR3-204ENST00000465892 PIEZO2Q9H5I5 2752 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms