RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 FMC1Q96HJ9 113 aa10.57□□□□□ -0.72
HDAC6-215ENST00000465457 MS4A10Q96PG2 267 aa10.57□□□□□ -0.72
HDAC6-215ENST00000465457 PRR25Q96S07 402 aa10.57□□□□□ -0.72
HDAC6-215ENST00000465457 Q9H3A6 140 aa10.57□□□□□ -0.72
HDAC6-215ENST00000465457 ZFAND3Q9H8U3 227 aa10.57□□□□□ -0.72
HDAC6-215ENST00000465457 BIN3Q9NQY0 253 aa10.57□□□□□ -0.72
HDAC6-215ENST00000465457 MLXQ9UH92 298 aa10.57□□□□□ -0.72
HDAC6-215ENST00000465457 TRBV24-1A0A075B6N3 115 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.56□□□□□ -0.72
HDAC6-215ENST00000465457 SERTM2A0A1B0GWG4 89 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 PGPA6NDG6 321 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 C1orf196B1AJZ1 125 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 K7EQM0 130 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 RAB5BP61020 215 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 UBE2G1P62253 170 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 SLC35B1P78383 322 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 PSG9Q00887 426 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-215ENST00000465457 ELOBQ15370 118 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 TMEM183BQ1AE95 376 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 LEMD1Q68G75 181 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 TOMM20LQ6UXN7 152 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 CLEC19AQ6UXS0 136 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 DPF1Q92782 380 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 GNB4Q9HAV0 340 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 ZNF586Q9NXT0 402 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 KLF12Q9Y4X4 402 aa10.56□□□□□ -0.72
HDAC6-215ENST00000465457 TSSC4Q9Y5U2 329 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-215ENST00000465457 TRAV9-1A0A075B6T8 112 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 TRBV6-1A0A0K0K1D8 114 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 FBLL1A6NHQ2 334 aaKnown RBP10.55□□□□□ -0.72
HDAC6-215ENST00000465457 MRPS12O15235 138 aaKnown RBP10.55□□□□□ -0.72
HDAC6-215ENST00000465457 IGHG4P01861 327 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 ARL3P36405 182 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 GALR1P47211 349 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 ZFAND6Q6FIF0 208 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 TEX38Q6PEX7 206 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 ADAMTSL5Q6ZMM2 481 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 C18orf65Q6ZTR6 163 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 OR10G8Q8NGN5 311 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 OCC1Q8TAD7 63 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 IGF2BP2-AS1Q96M15 143 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 METTL26Q96S19 204 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 AAMDCQ9H7C9 122 aa10.55□□□□□ -0.72
HDAC6-215ENST00000465457 PLECQ15149 4684 aaKnown RBP10.54□□□□□ -0.72
HDAC6-215ENST00000465457 A0A087X0K7 114 aa10.54□□□□□ -0.72
HDAC6-215ENST00000465457 NDUFA4O00483 81 aa10.54□□□□□ -0.72
HDAC6-215ENST00000465457 ISLRO14498 428 aa10.54□□□□□ -0.72
HDAC6-215ENST00000465457 TCRAP04437 139 aa10.54□□□□□ -0.72
HDAC6-215ENST00000465457 OR8I2Q8N0Y5 310 aa10.54□□□□□ -0.72
HDAC6-215ENST00000465457 FRAS1Q86XX4 4008 aa10.54□□□□□ -0.72
HDAC6-215ENST00000465457 GCGP01275 180 aa10.53□□□□□ -0.72
HDAC6-215ENST00000465457 PFN1P07737 140 aaKnown RBP10.53□□□□□ -0.72
HDAC6-215ENST00000465457 RPL19P84098 196 aaKnown RBP10.53□□□□□ -0.72
HDAC6-215ENST00000465457 SIGLEC15Q6ZMC9 328 aa10.53□□□□□ -0.72
HDAC6-215ENST00000465457 ZNF414Q96IQ9 312 aa10.53□□□□□ -0.72
HDAC6-215ENST00000465457 FAM210BQ96KR6 192 aa10.53□□□□□ -0.72
HDAC6-215ENST00000465457 NOL4LQ96MY1 436 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-215ENST00000465457 PYGO2Q9BRQ0 406 aa10.53□□□□□ -0.72
HDAC6-215ENST00000465457 OSTCQ9NRP0 149 aa10.53□□□□□ -0.72
HDAC6-215ENST00000465457 LINC00527Q9UJ94 153 aa10.53□□□□□ -0.72
HDAC6-215ENST00000465457 GGCTO75223 188 aaKnown RBP10.52□□□□□ -0.73
HDAC6-215ENST00000465457 ELANEP08246 267 aa10.52□□□□□ -0.73
HDAC6-215ENST00000465457 CSN1S1P47710 185 aa10.52□□□□□ -0.73
HDAC6-215ENST00000465457 FOXE3Q13461 319 aa10.52□□□□□ -0.73
HDAC6-215ENST00000465457 FAM231DQ6ZW35 169 aa10.52□□□□□ -0.73
HDAC6-215ENST00000465457 BAGE2Q86Y30 109 aa10.52□□□□□ -0.73
HDAC6-215ENST00000465457 TMEM75Q8N9X5 138 aa10.52□□□□□ -0.73
HDAC6-215ENST00000465457 GRAMD2BQ96HH9 432 aa10.52□□□□□ -0.73
HDAC6-215ENST00000465457 CLEC5AQ9NY25 188 aa10.52□□□□□ -0.73
HDAC6-215ENST00000465457 URGCP-MRPS24S4R325 110 aa10.52□□□□□ -0.73
HDAC6-215ENST00000465457 PGPEP1LA6NFU8 196 aa10.51□□□□□ -0.73
HDAC6-215ENST00000465457 K7EN84 100 aa10.51□□□□□ -0.73
HDAC6-215ENST00000465457 BUB3O43684 328 aa10.51□□□□□ -0.73
HDAC6-215ENST00000465457 PSMB8P28062 276 aa10.51□□□□□ -0.73
HDAC6-215ENST00000465457 ERVFC1-1P60608 527 aa10.51□□□□□ -0.73
HDAC6-215ENST00000465457 RCHY1Q96PM5 261 aa10.51□□□□□ -0.73
HDAC6-215ENST00000465457 DUX3Q96PT4 197 aa10.51□□□□□ -0.73
HDAC6-215ENST00000465457 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
HDAC6-215ENST00000465457 TGIF2-C20orf24A0A0A6YYL0 155 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 A0A1W2PS18 150 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 PPP5D1E7EU14 171 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 LTAP01374 205 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 IGLV2-8P01709 118 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 TYMSP04818 313 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 RPS10P46783 165 aaKnown RBP10.5□□□□□ -0.73
HDAC6-215ENST00000465457 FAM3BP58499 235 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-215ENST00000465457 GNG5P63218 68 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 C8orf86Q6ZUL3 223 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 OR4X2Q8NGF9 303 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 GPR61Q9BZJ8 451 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 IL36BQ9NZH7 164 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 U3KQE9 123 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 ALMS1Q8TCU4 4167 aa10.5□□□□□ -0.73
HDAC6-215ENST00000465457 CXCL1P09341 107 aa10.49□□□□□ -0.73
HDAC6-215ENST00000465457 MGST1P10620 155 aaKnown RBP10.49□□□□□ -0.73
HDAC6-215ENST00000465457 BMI1P35226 326 aa10.49□□□□□ -0.73
HDAC6-215ENST00000465457 RPEL1Q2QD12 228 aa10.49□□□□□ -0.73
HDAC6-215ENST00000465457 IBA57Q5T440 356 aaKnown RBP10.49□□□□□ -0.73
HDAC6-215ENST00000465457 Q86TA4 180 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms