RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RANP62826 216 aaKnown RBP12.89□□□□□ -0.35
EXOSC3-203ENST00000465229 BPIFA4PQ86YQ2 179 aa12.89□□□□□ -0.35
EXOSC3-203ENST00000465229 C5orf17Q8NAS9 161 aa12.89□□□□□ -0.35
EXOSC3-203ENST00000465229 SMIM12Q96EX1 92 aa12.89□□□□□ -0.35
EXOSC3-203ENST00000465229 OSTCQ9NRP0 149 aa12.89□□□□□ -0.35
EXOSC3-203ENST00000465229 KLF12Q9Y4X4 402 aa12.89□□□□□ -0.35
EXOSC3-203ENST00000465229 PHOX2AO14813 284 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 IGLV2-8P01709 118 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 TRGC2P03986 189 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 IL4P05112 153 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 S100A7P31151 101 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 SNRPEP62304 92 aaKnown RBP12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 SMUG1Q53HV7 270 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 OTORQ9NRC9 128 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 PGPA6NDG6 321 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 LGALS9O00182 355 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 ISLRO14498 428 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 PF4P02776 101 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 USF2Q15853 346 aaPredicted RBP12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 REC114Q7Z4M0 266 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 LYPD1Q8N2G4 141 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 BLNKQ8WV28 456 aa12.88□□□□□ -0.35
EXOSC3-203ENST00000465229 A0A1W2PPQ1 181 aa12.87□□□□□ -0.35
EXOSC3-203ENST00000465229 M0QZ24 198 aa12.87□□□□□ -0.35
EXOSC3-203ENST00000465229 SLC25A5P05141 298 aaKnown RBP12.87□□□□□ -0.35
EXOSC3-203ENST00000465229 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
EXOSC3-203ENST00000465229 LEMD1Q68G75 181 aa12.87□□□□□ -0.35
EXOSC3-203ENST00000465229 LINC00482Q8N8I6 264 aa12.87□□□□□ -0.35
EXOSC3-203ENST00000465229 ATG101Q9BSB4 218 aa12.87□□□□□ -0.35
EXOSC3-203ENST00000465229 IL36BQ9NZH7 164 aa12.87□□□□□ -0.35
EXOSC3-203ENST00000465229 ZNF98A6NK75 572 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 ZNF207O43670 478 aaKnown RBP12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST1H2BKO60814 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST1H2BJP06899 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST1H2BOP23527 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST1H2BBP33778 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST1H2BDP58876 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST1H2BCP62807 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST2H2BEQ16778 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST1H2BHQ93079 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST1H2BNQ99877 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 HIST1H2BMQ99879 126 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 Q9H3A6 140 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 ZNF586Q9NXT0 402 aa12.86□□□□□ -0.35
EXOSC3-203ENST00000465229 K7EMT4 169 aa12.85□□□□□ -0.35
EXOSC3-203ENST00000465229 MRPS12O15235 138 aaKnown RBP12.85□□□□□ -0.35
EXOSC3-203ENST00000465229 IGLC2P0DOY2 106 aa12.85□□□□□ -0.35
EXOSC3-203ENST00000465229 ERVFC1-1P60608 527 aa12.85□□□□□ -0.35
EXOSC3-203ENST00000465229 OR9G4Q8NGQ1 327 aa12.85□□□□□ -0.35
EXOSC3-203ENST00000465229 DAZ1Q9NQZ3 744 aaKnown RBP12.85□□□□□ -0.35
EXOSC3-203ENST00000465229 UFC1Q9Y3C8 167 aa12.85□□□□□ -0.35
EXOSC3-203ENST00000465229 V9GYV3 84 aa12.85□□□□□ -0.35
EXOSC3-203ENST00000465229 TRBV19A0A075B6N1 114 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 A8MWP6 167 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 OVOL1O14753 267 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 PDE6HQ13956 83 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 BAGE2Q86Y30 109 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 SPATA3Q8NHX4 192 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 FMC1Q96HJ9 113 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 PKD1L1Q8TDX9 2849 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 EDN2P20800 178 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 UBE2G1P62253 170 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 FABP9Q0Z7S8 132 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 OR5I1Q13606 314 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 FRZBQ92765 325 aa12.84□□□□□ -0.35
EXOSC3-203ENST00000465229 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 C2orf70A6NJV1 201 aa12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 APOHP02749 345 aaPredicted RBP12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 TCRAP04437 139 aa12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 HOXA5P20719 270 aa12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 LINC00479Q96M42 142 aa12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 METTL26Q96S19 204 aa12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 PEMTQ9UBM1 199 aa12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 RABAC1Q9UI14 185 aa12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 U3KQE9 123 aa12.83□□□□□ -0.36
EXOSC3-203ENST00000465229 IGHV3-49A0A0A0MS15 119 aa12.82□□□□□ -0.36
EXOSC3-203ENST00000465229 CSN3P07498 182 aa12.82□□□□□ -0.36
EXOSC3-203ENST00000465229 TRGC1P0CF51 173 aa12.82□□□□□ -0.36
EXOSC3-203ENST00000465229 ACTL10Q5JWF8 245 aa12.82□□□□□ -0.36
EXOSC3-203ENST00000465229 IBA57Q5T440 356 aaKnown RBP12.82□□□□□ -0.36
EXOSC3-203ENST00000465229 ADAMTSL5Q6ZMM2 481 aa12.82□□□□□ -0.36
EXOSC3-203ENST00000465229 ARL6IP6Q8N6S5 226 aa12.82□□□□□ -0.36
EXOSC3-203ENST00000465229 GPR82Q96P67 336 aa12.82□□□□□ -0.36
EXOSC3-203ENST00000465229 IGHV3OR16-13A0A075B7E8 117 aa12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 IGHV3-74A0A0B4J1X5 117 aa12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 S100A8P05109 93 aa12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 MGST1P10620 155 aaKnown RBP12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 RPL7P18124 248 aaKnown RBP12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 CBLN1P23435 193 aa12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 GNG5P63218 68 aa12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 RPL19P84098 196 aaKnown RBP12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 WFDC9Q8NEX5 89 aa12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 MLST8Q9BVC4 326 aa12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 SMPXQ9UHP9 88 aa12.81□□□□□ -0.36
EXOSC3-203ENST00000465229 TRAV34A0A0B4J273 112 aa12.8□□□□□ -0.36
EXOSC3-203ENST00000465229 IGHV7-4-1A0A0J9YVY3 117 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms