RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 FAM210AQ96ND0 272 aa6.68□□□□□ -1.34
NUDCD3-204ENST00000464812 SPAG8Q99932 426 aaPredicted RBP6.68□□□□□ -1.34
NUDCD3-204ENST00000464812 RARRES2Q99969 163 aa6.68□□□□□ -1.34
NUDCD3-204ENST00000464812 MCRIP2Q9BUT9 160 aaKnown RBP6.68□□□□□ -1.34
NUDCD3-204ENST00000464812 MAP6D1Q9H9H5 199 aa6.68□□□□□ -1.34
NUDCD3-204ENST00000464812 OTORQ9NRC9 128 aa6.68□□□□□ -1.34
NUDCD3-204ENST00000464812 DNAH7Q8WXX0 4024 aa6.68□□□□□ -1.34
NUDCD3-204ENST00000464812 TRAV2A0A0B4J234 112 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 SCO2A0A1W2PP80 73 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 A0A1W2PRE2 83 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 C9JQL5 133 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 F6UB75 175 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 ISLRO14498 428 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 CD5P06127 495 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 CD7P09564 240 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 INSL3P51460 131 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 CD81P60033 236 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 RAB14P61106 215 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 PMS2P11Q13670 270 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 ZNF506Q5JVG8 444 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 GDF5OSQ5U4N7 250 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 SLC50A1Q9BRV3 221 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 MANBALQ9NQG1 85 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 C19orf73Q9NVV2 129 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 RPH3ALQ9UNE2 315 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 ARL2-SNX15V9GYD0 113 aa6.67□□□□□ -1.34
NUDCD3-204ENST00000464812 IGKV2-40A0A087WW87 121 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 LINC00862A6NCI5 91 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 PGPA6NDG6 321 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 OR4C46A6NHA9 309 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 C11orf94C9JXX5 98 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 DNASE2O00115 360 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 IFNA1P01562 189 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 IGKV2D-40P01614 121 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 ZNF705DP0CH99 300 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 ZNF705BP0CI00 300 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 SUMO1P63165 101 aaKnown RBP6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 PSG9Q00887 426 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 EGFEM1PQ0D2K5 195 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 PSG3Q16557 428 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 PSMG4Q5JS54 123 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 CST9LP1Q5W188 147 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 RXFP4Q8TDU9 374 aa6.66□□□□□ -1.34
NUDCD3-204ENST00000464812 TENM3Q9P273 2699 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 EREGO14944 169 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 SLC25A5P05141 298 aaKnown RBP6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 PPT1P50897 306 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 DEFB131AP59861 70 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 PAFAH1B2P68402 229 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 MEF2BQ02080 365 aaPredicted RBP6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 COMMD7Q86VX2 200 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 APRG1Q8IVJ8 170 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 LYPD1Q8N2G4 141 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 C5orf17Q8NAS9 161 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 ZNF738Q8NE65 137 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 RPUSD4Q96CM3 377 aaKnown RBP6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 MRPL53Q96EL3 112 aaKnown RBP6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 LINC00052Q96N35 136 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 PRR25Q96S07 402 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 ASCL2Q99929 193 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 DERL1Q9BUN8 251 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 AAMDCQ9H7C9 122 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 MED9Q9NWA0 146 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 VAX2Q9UIW0 290 aa6.65□□□□□ -1.34
NUDCD3-204ENST00000464812 RBMY1BA6NDE4 496 aaKnown RBP6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 RBMY1EA6NEQ0 496 aaKnown RBP6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 KNCNA6PVL3 124 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 DIRC3C9JPN6 131 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 K7EIL1 84 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 PEX7O00628 323 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 TCRAP04437 139 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 RBMY1DP0C7P1 496 aaKnown RBP6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 SAMD13Q5VXD3 122 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 GOLT1AQ6ZVE7 132 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 Q8N1Y9 231 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 C2CD4CQ8TF44 421 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 C11orf52Q96A22 123 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 LINC00479Q96M42 142 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 AURKAIP1Q9NWT8 199 aaPredicted RBP6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 EPDR1Q9UM22 224 aa6.64□□□□□ -1.35
NUDCD3-204ENST00000464812 TRAV8-1A0A0A6YYK1 113 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 TRAV34A0A0B4J273 112 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 IGLV2-11P01706 119 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 SRP19P09132 144 aaKnown RBP6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 ID1P41134 155 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 SNRPD3P62318 126 aaKnown RBP6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 ERCC8Q13216 396 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 Q8TAT8 98 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 SGK494Q96LW2 274 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 VGLL1Q99990 258 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 GPR61Q9BZJ8 451 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 EIF5A2Q9GZV4 153 aaKnown RBP6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 SAV1Q9H4B6 383 aaPredicted RBP6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 PRELID1Q9Y255 219 aa6.63□□□□□ -1.35
NUDCD3-204ENST00000464812 DYNC2H1Q8NCM8 4307 aaKnown RBP6.62□□□□□ -1.35
NUDCD3-204ENST00000464812 TRBV20OR9-2A0A075B6H5 130 aa6.62□□□□□ -1.35
NUDCD3-204ENST00000464812 A0A0J9YX75 114 aa6.62□□□□□ -1.35
NUDCD3-204ENST00000464812 RAB19A4D1S5 217 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms