RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 PLGLAQ15195 96 aa9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 TMEM75Q8N9X5 138 aa9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 IFI27L1Q96BM0 104 aa9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 SH3BGRL2Q9UJC5 107 aa9.9□□□□□ -0.82
CLCNKA-204ENST00000464764 NDUFS7O75251 213 aa9.9□□□□□ -0.83
CLCNKA-204ENST00000464764 LGALS9BQ3B8N2 356 aa9.9□□□□□ -0.83
CLCNKA-204ENST00000464764 TMEM155Q4W5P6 130 aa9.9□□□□□ -0.83
CLCNKA-204ENST00000464764 LGALS9CQ6DKI2 356 aa9.9□□□□□ -0.83
CLCNKA-204ENST00000464764 ORMDL3Q8N138 153 aa9.9□□□□□ -0.83
CLCNKA-204ENST00000464764 Q8TAT8 98 aa9.9□□□□□ -0.83
CLCNKA-204ENST00000464764 SHANK2-AS3Q9BTD1 123 aa9.9□□□□□ -0.83
CLCNKA-204ENST00000464764 IGHV1-3A0A0C4DH29 117 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 SPAARA0A1B0GVQ0 90 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 TMEM189A5PLL7 270 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 SH2D1AO60880 128 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 HSD52Q0P140 79 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 MTURNQ8N3F0 131 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 ZNF491Q8N8L2 437 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 SCNM1Q9BWG6 230 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 IGHV3OR16-8A0A075B7F1 116 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 A0A1W2PPM0 123 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 K7EIM0 57 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 TNFRSF13BO14836 293 aaPredicted RBP9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 CNIH1O95406 144 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 GCSHP23434 173 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 CKS2P33552 79 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 FXYD2P54710 66 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 PAX8Q06710 450 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 ZNF493Q6ZR52 646 aa9.89□□□□□ -0.83
CLCNKA-204ENST00000464764 NPIPB5A8MRT5 1133 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 HBDP02042 147 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 CT45A10P0DMU9 189 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 RBPJQ06330 500 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 TWIST1Q15672 202 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 C1orf185Q5T7R7 199 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 JKAMPQ9P055 326 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 EGR2P11161 476 aaPredicted RBP9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 ZNF80P51504 273 aaPredicted RBP9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 CLEC2AQ6UVW9 174 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 TMEM108Q6UXF1 575 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 NEGR1Q7Z3B1 354 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 GATD1Q8NB37 220 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 NPFFR1Q9GZQ6 430 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 PTPRZ1P23471 2315 aaPredicted RBP9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 H3BRN7 92 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 K7EQM0 130 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 M0R296 226 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 IGHV3-23P01764 117 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 GATA1P15976 413 aaPredicted RBP9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 TMEM11P17152 192 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 HLA-DMBP28068 263 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 RNF125Q96EQ8 232 aa9.88□□□□□ -0.83
CLCNKA-204ENST00000464764 WI2-2373I1.2A0A1W2PRP0 233 aa9.87□□□□□ -0.83
CLCNKA-204ENST00000464764 MRPS12O15235 138 aaKnown RBP9.87□□□□□ -0.83
CLCNKA-204ENST00000464764 EVI2AP22794 236 aa9.87□□□□□ -0.83
CLCNKA-204ENST00000464764 PPIFP30405 207 aaKnown RBP9.87□□□□□ -0.83
CLCNKA-204ENST00000464764 GTSF1LQ9H1H1 148 aa9.87□□□□□ -0.83
CLCNKA-204ENST00000464764 COLQQ9Y215 455 aaPredicted RBP9.87□□□□□ -0.83
CLCNKA-204ENST00000464764 U3KQK5 164 aa9.87□□□□□ -0.83
CLCNKA-204ENST00000464764 Q5PR19 223 aa9.87□□□□□ -0.83
CLCNKA-204ENST00000464764 NUP37Q8NFH4 326 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 IGHV3-35A0A0C4DH35 117 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 SAMD5Q5TGI4 173 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 ZNF575Q86XF7 245 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 DEFB124Q8NES8 71 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 OR9G4Q8NGQ1 327 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 VGLL1Q99990 258 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 TRBV6-1A0A0K0K1D8 114 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 BUB1B-PAK6H3BSN5 160 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 IGLV1-47P01700 117 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 THBDP07204 575 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 SMAGPQ0VAQ4 97 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 C3orf36Q3SXR2 165 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 C8orf31Q8N9H6 132 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 DPF1Q92782 380 aa9.86□□□□□ -0.83
CLCNKA-204ENST00000464764 TEX48A0A1B0GUV7 120 aa9.85□□□□□ -0.83
CLCNKA-204ENST00000464764 A0A1B0GW15 77 aa9.85□□□□□ -0.83
CLCNKA-204ENST00000464764 GTSCR1Q86UQ5 136 aa9.85□□□□□ -0.83
CLCNKA-204ENST00000464764 OR4X2Q8NGF9 303 aa9.85□□□□□ -0.83
CLCNKA-204ENST00000464764 FABP2P12104 132 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 LEPP41159 167 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 RPEQ96AT9 228 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 OTOGLQ3ZCN5 2332 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 ZFHX3Q15911 3703 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 PRSS1P07477 247 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 Q6AWC8 147 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 RNASE6Q93091 150 aaKnown RBP9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 HHLA3Q9XRX5 114 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 CUL9Q8IWT3 2517 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 C16orf97H3BN30 126 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 SMIM13P0DJ93 91 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 GFRALQ6UXV0 394 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 ZNF562Q6V9R5 426 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 AAMDCQ9H7C9 122 aa9.84□□□□□ -0.83
CLCNKA-204ENST00000464764 A0A0G2JNJ9 132 aa9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 LCNL1Q6ZST4 164 aa9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 PRR25Q96S07 402 aa9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 COL25A1Q9BXS0 654 aaPredicted RBP9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 DYNLRB1Q9NP97 96 aa9.83□□□□□ -0.84
CLCNKA-204ENST00000464764 Q9UFV3 132 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms