RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 HIGD1AQ9Y241 93 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 U3KQ87 197 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 NCOA6Q14686 2063 aaPredicted RBP1.07□□□□□ -2.24
CLK1-208ENST00000464454 ADGRB2O60241 1585 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 PEG3Q9GZU2 1588 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 SCN8AQ9UQD0 1980 aa1.07□□□□□ -2.24
CLK1-208ENST00000464454 UBR2Q8IWV8 1755 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 LOC107984640A0A0U1RRK4 108 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 A0A1B0GW64 132 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 ZNF727A8MUV8 499 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 GABARAPH6UMI1 98 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 INE1O15225 51 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 BANF1O75531 89 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 CST7O76096 145 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 CCL4P13236 92 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 RAB5CP51148 216 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 TMBIM6P55061 237 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 ROMO1P60602 79 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 HBBP68871 147 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 MYL5Q02045 173 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 GDF5OSQ5U4N7 250 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 KRTAP26-1Q6PEX3 210 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 Q8IYB0 196 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 C1orf54Q8WWF1 131 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 PSMF1Q92530 271 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 CGREF1Q99674 301 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 LXNQ9BS40 222 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 TMEM138Q9NPI0 162 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 CDC42SE1Q9NRR8 79 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 CBLN4Q9NTU7 201 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 HSPB8Q9UJY1 196 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 OVOS2A0A0G2JMS6 1433 aa1.06□□□□□ -2.24
CLK1-208ENST00000464454 A2MP01023 1474 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 FRMPD1Q5SYB0 1578 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 MCM3APO60318 1980 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 HIST1H2BKO60814 126 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 OR2H2O95918 312 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 IGLV1-51P01701 117 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 HIST1H2BJP06899 126 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 KDELR1P24390 212 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 RPL35P42766 123 aaKnown RBP1.05□□□□□ -2.24
CLK1-208ENST00000464454 ARPP19P56211 112 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 DNAJB13P59910 316 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 MSMO1Q15800 293 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 MPV17LQ2QL34 196 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 GLYATL3Q5SZD4 288 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 OR4S1Q8NGB4 309 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 OR2T35Q8NGX2 323 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 ZC2HC1AQ96GY0 325 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 MCEEQ96PE7 176 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 NPCDR1Q9BY65 106 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 SOGA1O94964 1423 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 TNS3Q68CZ2 1445 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 CEP164Q9UPV0 1460 aa1.05□□□□□ -2.24
CLK1-208ENST00000464454 BICRAQ9NZM4 1560 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 H3BMG7 143 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 SULT1C4O75897 302 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 DPM2O94777 84 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 NCR2O95944 276 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 CXCL1P09341 107 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 CRYGSP22914 178 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 SDC2P34741 201 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 ASB16-AS1Q495Z4 193 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 FAM74A1Q5RGS3 127 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 LINC00305Q7Z4B0 112 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 TCTE3Q8IZS6 198 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 OR8I2Q8N0Y5 310 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 MORN4Q8NDC4 146 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 OR5A2Q8NGI9 324 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 OR4K15Q8NH41 348 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 CACYBPQ9HB71 228 aaKnown RBP1.04□□□□□ -2.24
CLK1-208ENST00000464454 TRAPPC2LQ9UL33 140 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 RFX7Q2KHR2 1363 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 OVOS2A0A0J9YW53 1432 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 KDM6AO15550 1401 aaPredicted RBP1.04□□□□□ -2.24
CLK1-208ENST00000464454 OVOS2Q6IE36 1432 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 PRG4Q92954 1404 aaPredicted RBP1.04□□□□□ -2.24
CLK1-208ENST00000464454 BCL9LQ86UU0 1499 aa1.04□□□□□ -2.24
CLK1-208ENST00000464454 TRAV13-1A0A0B4J241 112 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 TCRBV4S1A1TA0A5B7 111 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 IFNA4P05014 189 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 FOXA3P55318 350 aaPredicted RBP1.03□□□□□ -2.24
CLK1-208ENST00000464454 NDUFA6P56556 154 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 SELENOWP63302 87 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 HIST1H1AQ02539 215 aaPredicted RBP1.03□□□□□ -2.24
CLK1-208ENST00000464454 VMA21Q3ZAQ7 101 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 EIF5AL1Q6IS14 154 aaKnown RBP1.03□□□□□ -2.24
CLK1-208ENST00000464454 C2orf82Q6UX34 121 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 OR51A4Q8NGJ6 313 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 OR5D16Q8NGK9 328 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 PATE1Q8WXA2 126 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 C2orf88Q9BSF0 95 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 COPZ2Q9P299 210 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 CHCHD2Q9Y6H1 151 aaPredicted RBP1.03□□□□□ -2.24
CLK1-208ENST00000464454 LY96Q9Y6Y9 160 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 KIAA1107Q9UPP5 1409 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 WDR7Q9Y4E6 1490 aa1.03□□□□□ -2.24
CLK1-208ENST00000464454 XIRP1Q702N8 1843 aaKnown RBP1.03□□□□□ -2.25
CLK1-208ENST00000464454 DOCK4Q8N1I0 1966 aa1.03□□□□□ -2.25
CLK1-208ENST00000464454 ODAMA1E959 279 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms