RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PRSS22Q9GZN4 317 aa16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 RPP21Q9H633 154 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-216ENST00000464275 A0A1B0GXF2 115 aa16.83■□□□□ 0.28
PDLIM2-216ENST00000464275 NUTF2P61970 127 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-216ENST00000464275 PSG9Q00887 426 aa16.83■□□□□ 0.28
PDLIM2-216ENST00000464275 RELQ04864 619 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-216ENST00000464275 DEFB112Q30KQ8 113 aa16.83■□□□□ 0.28
PDLIM2-216ENST00000464275 GOLT1AQ6ZVE7 132 aa16.83■□□□□ 0.28
PDLIM2-216ENST00000464275 C18orf32Q8TCD1 76 aa16.83■□□□□ 0.28
PDLIM2-216ENST00000464275 AAMDCQ9H7C9 122 aa16.83■□□□□ 0.28
PDLIM2-216ENST00000464275 IGHV3-35A0A0C4DH35 117 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 HIGD1CA8MV81 97 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 K7EQM0 130 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 PPIFP30405 207 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 SLAQ13239 276 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 Q86TA4 180 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 SNHG12Q9BXW3 62 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 PRRC2AP48634 2157 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 DIRC3C9JPN6 131 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 EREGO14944 169 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 BLCAPP62952 87 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 PRR27Q6MZM9 219 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 TMEM75Q8N9X5 138 aa16.82■□□□□ 0.28
PDLIM2-216ENST00000464275 C19orf71A6NCJ1 209 aa16.81■□□□□ 0.28
PDLIM2-216ENST00000464275 KRTDAPP60985 99 aa16.81■□□□□ 0.28
PDLIM2-216ENST00000464275 RCHY1Q96PM5 261 aa16.81■□□□□ 0.28
PDLIM2-216ENST00000464275 IGLV2-11P01706 119 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 PRSS57Q6UWY2 283 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 FBN2P35556 2912 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 FSHBP01225 129 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 P01737 135 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 PMCHP20382 165 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 HBBP68871 147 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 CYB5R2Q6BCY4 276 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 ARL6IP6Q8N6S5 226 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 BORCS7Q96B45 105 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 USMG5Q96IX5 58 aa16.8■□□□□ 0.28
PDLIM2-216ENST00000464275 PRNTQ86SH4 94 aa16.79■□□□□ 0.28
PDLIM2-216ENST00000464275 Q8N976 141 aa16.79■□□□□ 0.28
PDLIM2-216ENST00000464275 DAZAP1Q96EP5 407 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-216ENST00000464275 CSMD1Q96PZ7 3565 aa16.79■□□□□ 0.28
PDLIM2-216ENST00000464275 ZNF580Q9UK33 172 aa16.79■□□□□ 0.28
PDLIM2-216ENST00000464275 SMAD5-AS1Q9Y6J3 95 aa16.79■□□□□ 0.28
PDLIM2-216ENST00000464275 IGHV3OR16-8A0A075B7F1 116 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 TRAV8-1A0A0A6YYK1 113 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 CD33P20138 364 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 DMRTA1Q5VZB9 504 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 NIT1Q86X76 327 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 Q96MF0 132 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 ALKBH7Q9BT30 221 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 SERTM2A0A1B0GWG4 89 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 CLPSL1A2RUU4 121 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 NPIPB6E9PJ23 425 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 BUB3O43684 328 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 IGHV4-59P01825 116 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 PLA2G2AP14555 144 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 CSN1S1P47710 185 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 PSG3Q16557 428 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 Q6ZS46 218 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 ZFP30Q9Y2G7 519 aa16.78■□□□□ 0.28
PDLIM2-216ENST00000464275 CSPG4Q6UVK1 2322 aa16.77■□□□□ 0.28
PDLIM2-216ENST00000464275 ZNF705AQ6ZN79 300 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-216ENST00000464275 C9orf139Q6ZV77 190 aa16.77■□□□□ 0.28
PDLIM2-216ENST00000464275 METTL26Q96S19 204 aa16.77■□□□□ 0.28
PDLIM2-216ENST00000464275 PAM16Q9Y3D7 125 aa16.77■□□□□ 0.28
PDLIM2-216ENST00000464275 A0A087X0K7 114 aa16.77■□□□□ 0.27
PDLIM2-216ENST00000464275 HSBP1O75506 76 aa16.77■□□□□ 0.27
PDLIM2-216ENST00000464275 PMCHL1Q16048 86 aa16.77■□□□□ 0.27
PDLIM2-216ENST00000464275 GDF5OSQ5U4N7 250 aa16.77■□□□□ 0.27
PDLIM2-216ENST00000464275 RBPMS2Q6ZRY4 209 aaKnown RBP16.77■□□□□ 0.27
PDLIM2-216ENST00000464275 PSG8Q9UQ74 426 aa16.77■□□□□ 0.27
PDLIM2-216ENST00000464275 J3QKU1 62 aa16.76■□□□□ 0.27
PDLIM2-216ENST00000464275 M0R3E3 92 aa16.76■□□□□ 0.27
PDLIM2-216ENST00000464275 ARL3P36405 182 aa16.76■□□□□ 0.27
PDLIM2-216ENST00000464275 SVEP1Q4LDE5 3571 aa16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 IGLV1-40P01703 118 aa16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 PF4V1P10720 104 aa16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 LINC00322Q6ZN03 302 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 KRTAP1-3Q8IUG1 177 aa16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 ZNF785A8K8V0 405 aa16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 C3orf79P0CE67 100 aa16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 CTRLP40313 264 aa16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 KLHDC1Q8N7A1 406 aa16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 U3KQE9 123 aa16.75■□□□□ 0.27
PDLIM2-216ENST00000464275 CELSR2Q9HCU4 2923 aa16.74■□□□□ 0.27
PDLIM2-216ENST00000464275 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-216ENST00000464275 TCAPO15273 167 aa16.74■□□□□ 0.27
PDLIM2-216ENST00000464275 CFHR3Q02985 330 aa16.74■□□□□ 0.27
PDLIM2-216ENST00000464275 TDRG1Q3Y452 100 aa16.74■□□□□ 0.27
PDLIM2-216ENST00000464275 CIARTQ8N365 385 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-216ENST00000464275 RNF114Q9Y508 228 aa16.74■□□□□ 0.27
PDLIM2-216ENST00000464275 USP9YO00507 2555 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-216ENST00000464275 C20orf202A1L168 122 aa16.73■□□□□ 0.27
PDLIM2-216ENST00000464275 C16orf54Q6UWD8 224 aa16.73■□□□□ 0.27
PDLIM2-216ENST00000464275 PTPN13Q12923 2485 aa16.73■□□□□ 0.27
PDLIM2-216ENST00000464275 A0A0G2JLM5 398 aa16.73■□□□□ 0.27
PDLIM2-216ENST00000464275 CAMPP49913 170 aa16.73■□□□□ 0.27
PDLIM2-216ENST00000464275 FOXA3P55318 350 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-216ENST00000464275 FBLL1A6NHQ2 334 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-216ENST00000464275 Q6YL49 198 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms