RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 CHAC2Q8WUX2 184 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 PFDN5Q99471 154 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 SEC22CQ9BRL7 303 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 CCDC32Q9BV29 185 aa10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 LYRM2Q9NU23 88 aaPredicted RBP10.09□□□□□ -0.79
SNRNP40-203ENST00000463988 FAM24AA6NFZ4 105 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 PRAC2D3DTV9 90 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 H3BQ15 152 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 ZNF253O75346 499 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 SNRPCP09234 159 aaKnown RBP10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 HTN1P15515 57 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 SULT1A1P50225 295 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 IL15RAQ13261 267 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 C1orf134Q5TEV5 83 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 MIC13Q5XKP0 118 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 LINC00299Q6ZSB3 139 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 ODF3Q96PU9 254 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 ATG101Q9BSB4 218 aa10.08□□□□□ -0.8
SNRNP40-203ENST00000463988 H2AFB2P0C5Z0 115 aa10.07□□□□□ -0.8
SNRNP40-203ENST00000463988 HBG1P69891 147 aa10.07□□□□□ -0.8
SNRNP40-203ENST00000463988 HBG2P69892 147 aa10.07□□□□□ -0.8
SNRNP40-203ENST00000463988 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
SNRNP40-203ENST00000463988 STX12Q86Y82 276 aa10.07□□□□□ -0.8
SNRNP40-203ENST00000463988 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
SNRNP40-203ENST00000463988 NOP10Q9NPE3 64 aaKnown RBP10.07□□□□□ -0.8
SNRNP40-203ENST00000463988 SLC39A9Q9NUM3 307 aa10.07□□□□□ -0.8
SNRNP40-203ENST00000463988 DYNC1H1Q14204 4646 aaKnown RBP10.07□□□□□ -0.8
SNRNP40-203ENST00000463988 TRAV5A0A0B4J249 113 aa10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 NPIPB6E9PJ23 425 aa10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 H3BTX0 84 aa10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 PRB4P10163 310 aaPredicted RBP10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 LEPP41159 167 aa10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 KIR3DS1Q14943 382 aa10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 ATP6V1FQ16864 119 aa10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 CCDC28AQ8IWP9 274 aa10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 TMEM252Q8N6L7 170 aa10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 MRPL53Q96EL3 112 aaKnown RBP10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 PCLOQ9Y6V0 5065 aa10.06□□□□□ -0.8
SNRNP40-203ENST00000463988 FAM240BA0A1B0GVZ2 78 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 IGSF23A1L1A6 192 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 MPDU1O75352 247 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 NUDT3O95989 172 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 CT45A10P0DMU9 189 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 CCL18P55774 89 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 S100A10P60903 97 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 RAB32Q13637 225 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 MZT2BQ6NZ67 158 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 ZNRF2Q8NHG8 242 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 ZNF586Q9NXT0 402 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 TMEM14CQ9P0S9 112 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
SNRNP40-203ENST00000463988 TRBV19A0A075B6N1 114 aa10.04□□□□□ -0.8
SNRNP40-203ENST00000463988 NBDYA0A0U1RRE5 68 aa10.04□□□□□ -0.8
SNRNP40-203ENST00000463988 UBE2L5PA0A1B0GUS4 154 aa10.04□□□□□ -0.8
SNRNP40-203ENST00000463988 BAXQ07812 192 aa10.04□□□□□ -0.8
SNRNP40-203ENST00000463988 PDE6HQ13956 83 aa10.04□□□□□ -0.8
SNRNP40-203ENST00000463988 RNF141Q8WVD5 230 aa10.04□□□□□ -0.8
SNRNP40-203ENST00000463988 ZNF503Q96F45 646 aa10.04□□□□□ -0.8
SNRNP40-203ENST00000463988 PARD6GQ9BYG4 376 aaPredicted RBP10.04□□□□□ -0.8
SNRNP40-203ENST00000463988 HIST1H1EP10412 219 aaKnown RBP10.03□□□□□ -0.8
SNRNP40-203ENST00000463988 ASAH1Q13510 395 aa10.03□□□□□ -0.8
SNRNP40-203ENST00000463988 PYGO2Q9BRQ0 406 aa10.03□□□□□ -0.8
SNRNP40-203ENST00000463988 PRELID1Q9Y255 219 aa10.03□□□□□ -0.8
SNRNP40-203ENST00000463988 LINC00588Q9Y4M8 146 aa10.03□□□□□ -0.8
SNRNP40-203ENST00000463988 SNURFLB1AK76 121 aa10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 RLN2P04090 185 aa10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 SLC25A5P05141 298 aaKnown RBP10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 M6PRP20645 277 aa10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 FGF7P21781 194 aa10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 DAZ2Q13117 558 aaKnown RBP10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 CLINT1Q14677 625 aa10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 S100ZQ8WXG8 99 aa10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 NPCDR1Q9BY65 106 aa10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 GPN1Q9HCN4 374 aaPredicted RBP10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 MUC4Q99102 2169 aa10.02□□□□□ -0.81
SNRNP40-203ENST00000463988 TRAV12-3A0A0B4J271 114 aa10.01□□□□□ -0.81
SNRNP40-203ENST00000463988 H3BNG1 76 aa10.01□□□□□ -0.81
SNRNP40-203ENST00000463988 NDUFB4O95168 129 aa10.01□□□□□ -0.81
SNRNP40-203ENST00000463988 OR5I1Q13606 314 aa10.01□□□□□ -0.81
SNRNP40-203ENST00000463988 RXFP4Q8TDU9 374 aa10.01□□□□□ -0.81
SNRNP40-203ENST00000463988 GNPNAT1Q96EK6 184 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-203ENST00000463988 LINC00477Q96M19 166 aa10.01□□□□□ -0.81
SNRNP40-203ENST00000463988 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
SNRNP40-203ENST00000463988 TIMM9Q9Y5J7 89 aa10.01□□□□□ -0.81
SNRNP40-203ENST00000463988 TRAV26-1A0A087WT03 109 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 GAGE12BA1L429 117 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 C7orf71A4D174 169 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 KLLNB2CW77 178 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 J3KRW8 73 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 M0R3E3 92 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 GAGE7O76087 117 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 GAGE12FP0CL80 117 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 GAGE12GP0CL81 117 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 GAGE12IP0CL82 117 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 SSX7Q7RTT5 188 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 C6orf223Q8N319 242 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 ZNF680Q8NEM1 530 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 FAM19A4Q96LR4 140 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 SLC25A31Q9H0C2 315 aa10□□□□□ -0.81
SNRNP40-203ENST00000463988 E5RGE8 158 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms