RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ODF3Q96PU9 254 aa14.48□□□□□ -0.09
PDLIM4-205ENST00000463615 SLC39A9Q9NUM3 307 aa14.48□□□□□ -0.09
PDLIM4-205ENST00000463615 RTL8CO15255 209 aa14.47□□□□□ -0.09
PDLIM4-205ENST00000463615 UBE2DNLQ8IWF7 75 aa14.47□□□□□ -0.09
PDLIM4-205ENST00000463615 OR10J6PQ8NGY7 276 aa14.47□□□□□ -0.09
PDLIM4-205ENST00000463615 RNASE8Q8TDE3 154 aaKnown RBP14.47□□□□□ -0.09
PDLIM4-205ENST00000463615 CBY3A6NI87 242 aa14.46□□□□□ -0.09
PDLIM4-205ENST00000463615 PRAC2D3DTV9 90 aa14.46□□□□□ -0.09
PDLIM4-205ENST00000463615 MPDU1O75352 247 aa14.46□□□□□ -0.09
PDLIM4-205ENST00000463615 S100A10P60903 97 aa14.46□□□□□ -0.09
PDLIM4-205ENST00000463615 TMEM263Q8WUH6 116 aaKnown RBP14.46□□□□□ -0.09
PDLIM4-205ENST00000463615 TMEM14CQ9P0S9 112 aa14.46□□□□□ -0.09
PDLIM4-205ENST00000463615 TIMM8BQ9Y5J9 83 aaPredicted RBP14.46□□□□□ -0.09
PDLIM4-205ENST00000463615 TRAV5A0A0B4J249 113 aa14.45□□□□□ -0.1
PDLIM4-205ENST00000463615 SNRPCP09234 159 aaKnown RBP14.45□□□□□ -0.1
PDLIM4-205ENST00000463615 DEFB130BP0DP73 79 aa14.45□□□□□ -0.1
PDLIM4-205ENST00000463615 DEFB130AP0DP74 79 aa14.45□□□□□ -0.1
PDLIM4-205ENST00000463615 MRPL53Q96EL3 112 aaKnown RBP14.45□□□□□ -0.1
PDLIM4-205ENST00000463615 UBE2L5PA0A1B0GUS4 154 aa14.44□□□□□ -0.1
PDLIM4-205ENST00000463615 NPIPB6E9PJ23 425 aa14.44□□□□□ -0.1
PDLIM4-205ENST00000463615 H3BTX0 84 aa14.44□□□□□ -0.1
PDLIM4-205ENST00000463615 ATP5G1P05496 136 aa14.44□□□□□ -0.1
PDLIM4-205ENST00000463615 ATP5G3P48201 142 aa14.44□□□□□ -0.1
PDLIM4-205ENST00000463615 BAXQ07812 192 aa14.44□□□□□ -0.1
PDLIM4-205ENST00000463615 LINC00612Q8N6U2 182 aa14.44□□□□□ -0.1
PDLIM4-205ENST00000463615 ZNF586Q9NXT0 402 aa14.44□□□□□ -0.1
PDLIM4-205ENST00000463615 NACAE9PAV3 2078 aa14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 KIAA1109Q2LD37 5005 aa14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 DNAH11Q96DT5 4516 aa14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 TRBV19A0A075B6N1 114 aa14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 M0R2N4 97 aa14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 PDE6HQ13956 83 aa14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 KIR3DS1Q14943 382 aa14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 FCN2Q15485 313 aa14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 GFI1BQ5VTD9 330 aa14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 GPN1Q9HCN4 374 aaPredicted RBP14.43□□□□□ -0.1
PDLIM4-205ENST00000463615 PRSS29PA6NIE9 313 aa14.42□□□□□ -0.1
PDLIM4-205ENST00000463615 UPK1BO75841 260 aa14.42□□□□□ -0.1
PDLIM4-205ENST00000463615 CT45A10P0DMU9 189 aa14.42□□□□□ -0.1
PDLIM4-205ENST00000463615 PRB4P10163 310 aaPredicted RBP14.42□□□□□ -0.1
PDLIM4-205ENST00000463615 NPCDR1Q9BY65 106 aa14.42□□□□□ -0.1
PDLIM4-205ENST00000463615 NMES1Q9C002 83 aa14.42□□□□□ -0.1
PDLIM4-205ENST00000463615 HIST1H1EP10412 219 aaKnown RBP14.41□□□□□ -0.1
PDLIM4-205ENST00000463615 FGF7P21781 194 aa14.41□□□□□ -0.1
PDLIM4-205ENST00000463615 LEPP41159 167 aa14.41□□□□□ -0.1
PDLIM4-205ENST00000463615 PARD6GQ9BYG4 376 aaPredicted RBP14.41□□□□□ -0.1
PDLIM4-205ENST00000463615 PRELID1Q9Y255 219 aa14.41□□□□□ -0.1
PDLIM4-205ENST00000463615 E5RGE8 158 aa14.4□□□□□ -0.1
PDLIM4-205ENST00000463615 F5H768 121 aa14.4□□□□□ -0.1
PDLIM4-205ENST00000463615 PRAF2O60831 178 aa14.4□□□□□ -0.1
PDLIM4-205ENST00000463615 NDUFB4O95168 129 aa14.4□□□□□ -0.1
PDLIM4-205ENST00000463615 HTN1P15515 57 aa14.4□□□□□ -0.1
PDLIM4-205ENST00000463615 ENKURQ8TC29 256 aa14.4□□□□□ -0.1
PDLIM4-205ENST00000463615 NOP10Q9NPE3 64 aaKnown RBP14.4□□□□□ -0.1
PDLIM4-205ENST00000463615 DYNC1H1Q14204 4646 aaKnown RBP14.39□□□□□ -0.11
PDLIM4-205ENST00000463615 IGLV2-18A0A075B6J9 118 aa14.39□□□□□ -0.11
PDLIM4-205ENST00000463615 A6NHS1 94 aa14.39□□□□□ -0.11
PDLIM4-205ENST00000463615 RLN2P04090 185 aa14.39□□□□□ -0.11
PDLIM4-205ENST00000463615 CCDC28AQ8IWP9 274 aa14.39□□□□□ -0.11
PDLIM4-205ENST00000463615 SLC25A31Q9H0C2 315 aa14.39□□□□□ -0.11
PDLIM4-205ENST00000463615 PKHD1P08F94 4074 aa14.39□□□□□ -0.11
PDLIM4-205ENST00000463615 PKD1P98161 4303 aa14.38□□□□□ -0.11
PDLIM4-205ENST00000463615 CYCSP99999 105 aaKnown RBP14.38□□□□□ -0.11
PDLIM4-205ENST00000463615 IFITM3Q01628 133 aa14.38□□□□□ -0.11
PDLIM4-205ENST00000463615 NHLH2Q02577 135 aa14.38□□□□□ -0.11
PDLIM4-205ENST00000463615 OR5C1Q8NGR4 320 aa14.38□□□□□ -0.11
PDLIM4-205ENST00000463615 FAM19A4Q96LR4 140 aa14.38□□□□□ -0.11
PDLIM4-205ENST00000463615 PYGO2Q9BRQ0 406 aa14.38□□□□□ -0.11
PDLIM4-205ENST00000463615 M0R3E3 92 aa14.37□□□□□ -0.11
PDLIM4-205ENST00000463615 SLC25A5P05141 298 aaKnown RBP14.37□□□□□ -0.11
PDLIM4-205ENST00000463615 SOHLH1Q5JUK2 328 aa14.37□□□□□ -0.11
PDLIM4-205ENST00000463615 ZNF503Q96F45 646 aa14.37□□□□□ -0.11
PDLIM4-205ENST00000463615 FAM167A-AS1Q96KT0 104 aa14.37□□□□□ -0.11
PDLIM4-205ENST00000463615 LINC00477Q96M19 166 aa14.37□□□□□ -0.11
PDLIM4-205ENST00000463615 LINC00467Q9BRT7 94 aa14.37□□□□□ -0.11
PDLIM4-205ENST00000463615 KLLNB2CW77 178 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 H0YIZ8 118 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 SIX6O95475 246 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 DAZ2Q13117 558 aaKnown RBP14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 GCSAMLQ5JQS6 135 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 ZNRF2Q8NHG8 242 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 RNF141Q8WVD5 230 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 ATG101Q9BSB4 218 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 SLC25A2Q9BXI2 301 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 KCNIP2Q9NS61 270 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 PTTG2Q9NZH5 202 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 OR5AC2Q9NZP5 309 aa14.36□□□□□ -0.11
PDLIM4-205ENST00000463615 TRAV12-3A0A0B4J271 114 aa14.35□□□□□ -0.11
PDLIM4-205ENST00000463615 INMT-MINDY4F8WBC2 141 aa14.35□□□□□ -0.11
PDLIM4-205ENST00000463615 NMBP08949 121 aa14.35□□□□□ -0.11
PDLIM4-205ENST00000463615 PYYP10082 97 aa14.35□□□□□ -0.11
PDLIM4-205ENST00000463615 CRISP2P16562 243 aa14.35□□□□□ -0.11
PDLIM4-205ENST00000463615 C1orf134Q5TEV5 83 aa14.35□□□□□ -0.11
PDLIM4-205ENST00000463615 C9orf47Q6ZRZ4 202 aa14.35□□□□□ -0.11
PDLIM4-205ENST00000463615 MARVELD1Q9BSK0 173 aa14.35□□□□□ -0.11
PDLIM4-205ENST00000463615 TIMM9Q9Y5J7 89 aa14.35□□□□□ -0.11
PDLIM4-205ENST00000463615 SNURFLB1AK76 121 aa14.34□□□□□ -0.11
PDLIM4-205ENST00000463615 ZNF324O75467 553 aaPredicted RBP14.34□□□□□ -0.11
PDLIM4-205ENST00000463615 NUDT3O95989 172 aa14.34□□□□□ -0.11
PDLIM4-205ENST00000463615 CCL18P55774 89 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms