RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 HTN3P15516 51 aa12.88□□□□□ -0.35
LINC00960-201ENST00000463183 RPP25LQ8N5L8 163 aaKnown RBP12.88□□□□□ -0.35
LINC00960-201ENST00000463183 SMIM3Q9BZL3 60 aa12.88□□□□□ -0.35
LINC00960-201ENST00000463183 J3KRW8 73 aa12.87□□□□□ -0.35
LINC00960-201ENST00000463183 MPC2O95563 127 aa12.87□□□□□ -0.35
LINC00960-201ENST00000463183 GIPP09681 153 aaPredicted RBP12.87□□□□□ -0.35
LINC00960-201ENST00000463183 PYYP10082 97 aa12.87□□□□□ -0.35
LINC00960-201ENST00000463183 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
LINC00960-201ENST00000463183 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
LINC00960-201ENST00000463183 BLNKQ8WV28 456 aa12.87□□□□□ -0.35
LINC00960-201ENST00000463183 LINC01587Q99440 93 aa12.87□□□□□ -0.35
LINC00960-201ENST00000463183 ZNF586Q9NXT0 402 aa12.87□□□□□ -0.35
LINC00960-201ENST00000463183 APLNQ9ULZ1 77 aa12.87□□□□□ -0.35
LINC00960-201ENST00000463183 A0A1B0GVG6 124 aa12.86□□□□□ -0.35
LINC00960-201ENST00000463183 PET100P0DJ07 73 aa12.86□□□□□ -0.35
LINC00960-201ENST00000463183 RNF126Q9BV68 326 aa12.86□□□□□ -0.35
LINC00960-201ENST00000463183 WDR61Q9GZS3 305 aaKnown RBP12.86□□□□□ -0.35
LINC00960-201ENST00000463183 MBD2Q9UBB5 411 aa12.86□□□□□ -0.35
LINC00960-201ENST00000463183 DKK2Q9UBU2 259 aa12.86□□□□□ -0.35
LINC00960-201ENST00000463183 VPS13DQ5THJ4 4388 aa12.86□□□□□ -0.35
LINC00960-201ENST00000463183 GUK1Q16774 197 aa12.85□□□□□ -0.35
LINC00960-201ENST00000463183 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
LINC00960-201ENST00000463183 SAT2Q96F10 170 aaPredicted RBP12.85□□□□□ -0.35
LINC00960-201ENST00000463183 NIPSNAP3BQ9BS92 247 aa12.85□□□□□ -0.35
LINC00960-201ENST00000463183 TIMM9Q9Y5J7 89 aa12.85□□□□□ -0.35
LINC00960-201ENST00000463183 TCTAP57738 103 aa12.84□□□□□ -0.35
LINC00960-201ENST00000463183 ATP5SQ99766 215 aa12.84□□□□□ -0.35
LINC00960-201ENST00000463183 HSPB11Q9Y547 144 aa12.84□□□□□ -0.35
LINC00960-201ENST00000463183 C17orf112F2Z3M2 114 aa12.83□□□□□ -0.36
LINC00960-201ENST00000463183 M0R3E3 92 aa12.83□□□□□ -0.36
LINC00960-201ENST00000463183 RPL12P30050 165 aaKnown RBP12.83□□□□□ -0.36
LINC00960-201ENST00000463183 CDKN1BP46527 198 aa12.83□□□□□ -0.36
LINC00960-201ENST00000463183 KIR3DS1Q14943 382 aa12.83□□□□□ -0.36
LINC00960-201ENST00000463183 SLC25A2Q9BXI2 301 aa12.83□□□□□ -0.36
LINC00960-201ENST00000463183 KCNIP2Q9NS61 270 aa12.83□□□□□ -0.36
LINC00960-201ENST00000463183 TRBV19A0A075B6N1 114 aa12.82□□□□□ -0.36
LINC00960-201ENST00000463183 TEX48A0A1B0GUV7 120 aa12.82□□□□□ -0.36
LINC00960-201ENST00000463183 IFNA5P01569 189 aa12.82□□□□□ -0.36
LINC00960-201ENST00000463183 HIST1H1EP10412 219 aaKnown RBP12.82□□□□□ -0.36
LINC00960-201ENST00000463183 AZU1P20160 251 aa12.82□□□□□ -0.36
LINC00960-201ENST00000463183 DAD1P61803 113 aa12.82□□□□□ -0.36
LINC00960-201ENST00000463183 EXOC3-AS1Q8N2X6 119 aa12.82□□□□□ -0.36
LINC00960-201ENST00000463183 SCGB1C1Q8TD33 95 aa12.82□□□□□ -0.36
LINC00960-201ENST00000463183 TMEM14CQ9P0S9 112 aa12.82□□□□□ -0.36
LINC00960-201ENST00000463183 BIRC6Q9NR09 4857 aa12.82□□□□□ -0.36
LINC00960-201ENST00000463183 OR10J4P0C629 311 aa12.81□□□□□ -0.36
LINC00960-201ENST00000463183 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
LINC00960-201ENST00000463183 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
LINC00960-201ENST00000463183 Q5BKY6 102 aa12.81□□□□□ -0.36
LINC00960-201ENST00000463183 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
LINC00960-201ENST00000463183 hCG_2014768A0A024R1R8 64 aa12.8□□□□□ -0.36
LINC00960-201ENST00000463183 G3V3Q6 166 aa12.8□□□□□ -0.36
LINC00960-201ENST00000463183 EIF3GO75821 320 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC00960-201ENST00000463183 TSPOP30536 169 aa12.8□□□□□ -0.36
LINC00960-201ENST00000463183 ERCC8Q13216 396 aa12.8□□□□□ -0.36
LINC00960-201ENST00000463183 FFAR4Q5NUL3 377 aa12.8□□□□□ -0.36
LINC00960-201ENST00000463183 GFI1BQ5VTD9 330 aa12.8□□□□□ -0.36
LINC00960-201ENST00000463183 ST6GAL2Q96JF0 529 aa12.8□□□□□ -0.36
LINC00960-201ENST00000463183 OR51M1Q9H341 326 aa12.8□□□□□ -0.36
LINC00960-201ENST00000463183 OR7C2O60412 319 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 NDUFB4O95168 129 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 ICAM4Q14773 271 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 FAM122CQ6P4D5 195 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 TMEM256Q8N2U0 113 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 OR2T35Q8NGX2 323 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 FAM167A-AS1Q96KT0 104 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 PAXXQ9BUH6 204 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 AAMDCQ9H7C9 122 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 FUT9Q9Y231 359 aa12.79□□□□□ -0.36
LINC00960-201ENST00000463183 ZNF253O75346 499 aa12.78□□□□□ -0.36
LINC00960-201ENST00000463183 LEPP41159 167 aa12.78□□□□□ -0.36
LINC00960-201ENST00000463183 TAS2R60P59551 318 aa12.78□□□□□ -0.36
LINC00960-201ENST00000463183 MRPL32Q9BYC8 188 aaKnown RBP12.78□□□□□ -0.36
LINC00960-201ENST00000463183 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
LINC00960-201ENST00000463183 DNAH10Q8IVF4 4471 aa12.77□□□□□ -0.37
LINC00960-201ENST00000463183 TRAV12-3A0A0B4J271 114 aa12.77□□□□□ -0.37
LINC00960-201ENST00000463183 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.37
LINC00960-201ENST00000463183 NBEAP1P0C6P0 100 aa12.77□□□□□ -0.37
LINC00960-201ENST00000463183 IGKV2-40A0A087WW87 121 aaPredicted RBP12.76□□□□□ -0.37
LINC00960-201ENST00000463183 H7BYZ3 331 aa12.76□□□□□ -0.37
LINC00960-201ENST00000463183 IGKV2D-40P01614 121 aaPredicted RBP12.76□□□□□ -0.37
LINC00960-201ENST00000463183 PDE6HQ13956 83 aa12.76□□□□□ -0.37
LINC00960-201ENST00000463183 TCTE3Q8IZS6 198 aa12.76□□□□□ -0.37
LINC00960-201ENST00000463183 RNF141Q8WVD5 230 aa12.76□□□□□ -0.37
LINC00960-201ENST00000463183 MRPL53Q96EL3 112 aaKnown RBP12.76□□□□□ -0.37
LINC00960-201ENST00000463183 C16orf74Q96GX8 76 aa12.76□□□□□ -0.37
LINC00960-201ENST00000463183 LYRM9A8MSI8 78 aa12.75□□□□□ -0.37
LINC00960-201ENST00000463183 UBE2L3P68036 154 aaKnown RBP12.75□□□□□ -0.37
LINC00960-201ENST00000463183 CCDC28AQ8IWP9 274 aa12.75□□□□□ -0.37
LINC00960-201ENST00000463183 FXYD5Q96DB9 178 aa12.75□□□□□ -0.37
LINC00960-201ENST00000463183 PHYHIPLQ96FC7 376 aa12.75□□□□□ -0.37
LINC00960-201ENST00000463183 NOP10Q9NPE3 64 aaKnown RBP12.75□□□□□ -0.37
LINC00960-201ENST00000463183 PRELID1Q9Y255 219 aa12.75□□□□□ -0.37
LINC00960-201ENST00000463183 FRAS1Q86XX4 4008 aa12.74□□□□□ -0.37
LINC00960-201ENST00000463183 PLAC8L1A1L4L8 177 aa12.74□□□□□ -0.37
LINC00960-201ENST00000463183 TMEM88Q6PEY1 159 aa12.74□□□□□ -0.37
LINC00960-201ENST00000463183 UBE2DNLQ8IWF7 75 aa12.74□□□□□ -0.37
LINC00960-201ENST00000463183 DNAH6Q9C0G6 4158 aa12.74□□□□□ -0.37
LINC00960-201ENST00000463183 F5H768 121 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms