RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PDE6HQ13956 83 aa9.38□□□□□ -0.91
HDAC1-203ENST00000463172 BAP18Q8IXM2 172 aa9.38□□□□□ -0.91
HDAC1-203ENST00000463172 MRPL53Q96EL3 112 aaKnown RBP9.38□□□□□ -0.91
HDAC1-203ENST00000463172 AAMDCQ9H7C9 122 aa9.38□□□□□ -0.91
HDAC1-203ENST00000463172 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 TRAV5A0A0B4J249 113 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 CRXO43186 299 aaPredicted RBP9.37□□□□□ -0.91
HDAC1-203ENST00000463172 MPC2O95563 127 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 SNRPCP09234 159 aaKnown RBP9.37□□□□□ -0.91
HDAC1-203ENST00000463172 P0DMU3 169 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 FAM231AP0DMU4 169 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 FAM231CP0DMU5 169 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 LEPP41159 167 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 H2BFSP57053 126 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 TAS2R60P59551 318 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 MORN5Q5VZ52 161 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 CCDC28AQ8IWP9 274 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 RPP25LQ8N5L8 163 aaKnown RBP9.37□□□□□ -0.91
HDAC1-203ENST00000463172 SCGB1C1Q8TD33 95 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 SAT2Q96F10 170 aaPredicted RBP9.37□□□□□ -0.91
HDAC1-203ENST00000463172 ATP5SQ99766 215 aa9.37□□□□□ -0.91
HDAC1-203ENST00000463172 MRPL32Q9BYC8 188 aaKnown RBP9.37□□□□□ -0.91
HDAC1-203ENST00000463172 WDR61Q9GZS3 305 aaKnown RBP9.37□□□□□ -0.91
HDAC1-203ENST00000463172 TRBV19A0A075B6N1 114 aa9.36□□□□□ -0.91
HDAC1-203ENST00000463172 ZNF705GA8MUZ8 300 aaPredicted RBP9.36□□□□□ -0.91
HDAC1-203ENST00000463172 H3BQ15 152 aa9.36□□□□□ -0.91
HDAC1-203ENST00000463172 H3BTX0 84 aa9.36□□□□□ -0.91
HDAC1-203ENST00000463172 H7BYZ3 331 aa9.36□□□□□ -0.91
HDAC1-203ENST00000463172 SLC17A3O00476 420 aa9.36□□□□□ -0.91
HDAC1-203ENST00000463172 PTTG1O95997 202 aa9.36□□□□□ -0.91
HDAC1-203ENST00000463172 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
HDAC1-203ENST00000463172 ODF3Q96PU9 254 aa9.36□□□□□ -0.91
HDAC1-203ENST00000463172 EPPK1P58107 5090 aaKnown RBP9.35□□□□□ -0.91
HDAC1-203ENST00000463172 H0YIZ8 118 aa9.35□□□□□ -0.91
HDAC1-203ENST00000463172 HTN3P15516 51 aa9.35□□□□□ -0.91
HDAC1-203ENST00000463172 RPL12P30050 165 aaKnown RBP9.35□□□□□ -0.91
HDAC1-203ENST00000463172 ZNF493Q6ZR52 646 aa9.35□□□□□ -0.91
HDAC1-203ENST00000463172 ZNF586Q9NXT0 402 aa9.35□□□□□ -0.91
HDAC1-203ENST00000463172 HSPB11Q9Y547 144 aa9.35□□□□□ -0.91
HDAC1-203ENST00000463172 HTN1P15515 57 aa9.34□□□□□ -0.91
HDAC1-203ENST00000463172 TAS2R45P59539 299 aa9.34□□□□□ -0.91
HDAC1-203ENST00000463172 BLNKQ8WV28 456 aa9.34□□□□□ -0.91
HDAC1-203ENST00000463172 OR51M1Q9H341 326 aa9.34□□□□□ -0.91
HDAC1-203ENST00000463172 FUT9Q9Y231 359 aa9.34□□□□□ -0.91
HDAC1-203ENST00000463172 TIMM8BQ9Y5J9 83 aaPredicted RBP9.34□□□□□ -0.91
HDAC1-203ENST00000463172 BIRC6Q9NR09 4857 aa9.34□□□□□ -0.91
HDAC1-203ENST00000463172 NPIPB6E9PJ23 425 aa9.33□□□□□ -0.92
HDAC1-203ENST00000463172 NBEAP1P0C6P0 100 aa9.33□□□□□ -0.92
HDAC1-203ENST00000463172 PYYP10082 97 aa9.33□□□□□ -0.92
HDAC1-203ENST00000463172 UBE2DNLQ8IWF7 75 aa9.33□□□□□ -0.92
HDAC1-203ENST00000463172 TMEM263Q8WUH6 116 aaKnown RBP9.33□□□□□ -0.92
HDAC1-203ENST00000463172 LINC00477Q96M19 166 aa9.33□□□□□ -0.92
HDAC1-203ENST00000463172 PAXXQ9BUH6 204 aa9.33□□□□□ -0.92
HDAC1-203ENST00000463172 SLC25A2Q9BXI2 301 aa9.33□□□□□ -0.92
HDAC1-203ENST00000463172 MED28Q9H204 178 aa9.33□□□□□ -0.92
HDAC1-203ENST00000463172 MBD2Q9UBB5 411 aa9.33□□□□□ -0.92
HDAC1-203ENST00000463172 KMT2AQ03164 3969 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 PRAC2D3DTV9 90 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 OR7C2O60412 319 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 DEFB130BP0DP73 79 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 DEFB130AP0DP74 79 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 CSN1S1P47710 185 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 KHDC3LQ587J8 217 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 GCSAMLQ5JQS6 135 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 FFAR4Q5NUL3 377 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 TMEM78Q5T7P6 136 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 C15orf53Q8NAA6 179 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 ASB13Q8WXK3 278 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 PARD6GQ9BYG4 376 aaPredicted RBP9.32□□□□□ -0.92
HDAC1-203ENST00000463172 ALG5Q9Y673 324 aa9.32□□□□□ -0.92
HDAC1-203ENST00000463172 SNURFLB1AK76 121 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 SLC25A5P05141 298 aaKnown RBP9.31□□□□□ -0.92
HDAC1-203ENST00000463172 ATP5G1P05496 136 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 CT45A10P0DMU9 189 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 ATP5G3P48201 142 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 ICAM4Q14773 271 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 ACOT6Q3I5F7 207 aaPredicted RBP9.31□□□□□ -0.92
HDAC1-203ENST00000463172 GFI1BQ5VTD9 330 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 POM121L12Q8N7R1 296 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 RNF141Q8WVD5 230 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 PYGO2Q9BRQ0 406 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 SMIM3Q9BZL3 60 aa9.31□□□□□ -0.92
HDAC1-203ENST00000463172 CBY3A6NI87 242 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 J3KRW8 73 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 M0R3E3 92 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 NDUFB4O95168 129 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 NMBP08949 121 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 AZU1P20160 251 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 UBE2L3P68036 154 aaKnown RBP9.3□□□□□ -0.92
HDAC1-203ENST00000463172 ZNF266Q14584 549 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 FAM74A1Q5RGS3 127 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 LYPD1Q8N2G4 141 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 FAM167A-AS1Q96KT0 104 aa9.3□□□□□ -0.92
HDAC1-203ENST00000463172 TRAV12-3A0A0B4J271 114 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 A0A1W2PPV4 95 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 C7orf71A4D174 169 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 F5H768 121 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 OR10J4P0C629 311 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 PRB4P10163 310 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms