RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 SCN8AQ9UQD0 1980 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 MRPS14O60783 128 aaKnown RBP1.56□□□□□ -2.16
GPNMB-205ENST00000463011 SCTP09683 121 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 CXCL8P10145 99 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 CNBPP62633 177 aaKnown RBP1.56□□□□□ -2.16
GPNMB-205ENST00000463011 GKN2Q86XP6 184 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 CCL4L1Q8NHW4 92 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 NAT14Q8WUY8 206 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 C4orf3Q8WVX3 66 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 FAM107BQ9H098 131 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 CDC42SE1Q9NRR8 79 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 CALML5Q9NZT1 146 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 HSPB8Q9UJY1 196 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 MED23Q9ULK4 1368 aa1.56□□□□□ -2.16
GPNMB-205ENST00000463011 MYO5AQ9Y4I1 1855 aaKnown RBP1.56□□□□□ -2.16
GPNMB-205ENST00000463011 KDM6AO15550 1401 aaPredicted RBP1.56□□□□□ -2.16
GPNMB-205ENST00000463011 ZCCHC6Q5VYS8 1495 aaKnown RBP1.56□□□□□ -2.16
GPNMB-205ENST00000463011 ICE1Q9Y2F5 2266 aa1.55□□□□□ -2.16
GPNMB-205ENST00000463011 CEP152O94986 1710 aa1.55□□□□□ -2.16
GPNMB-205ENST00000463011 ANKRD31Q8N7Z5 1873 aa1.55□□□□□ -2.16
GPNMB-205ENST00000463011 NUP210Q8TEM1 1887 aaPredicted RBP1.55□□□□□ -2.16
GPNMB-205ENST00000463011 HCRTO43612 131 aa1.55□□□□□ -2.16
GPNMB-205ENST00000463011 MORN2Q502X0 79 aa1.55□□□□□ -2.16
GPNMB-205ENST00000463011 TMEM244Q5VVB8 128 aa1.55□□□□□ -2.16
GPNMB-205ENST00000463011 OR5AS1Q8N127 324 aa1.55□□□□□ -2.16
GPNMB-205ENST00000463011 PATE1Q8WXA2 126 aa1.55□□□□□ -2.16
GPNMB-205ENST00000463011 CACNA1GO43497 2377 aa1.55□□□□□ -2.16
GPNMB-205ENST00000463011 ANAPC1Q9H1A4 1944 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.54□□□□□ -2.16
GPNMB-205ENST00000463011 J3QKU1 62 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 CCL16O15467 120 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 TRACP01848 142 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 TCRAP04437 139 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 PSPHP78330 225 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 SMIM21Q3B7S5 101 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 HSD17B12Q53GQ0 312 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 FAM74A1Q5RGS3 127 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 OR5AK2Q8NH90 309 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 BANF2Q9H503 90 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 MED9Q9NWA0 146 aa1.54□□□□□ -2.16
GPNMB-205ENST00000463011 LOC107986453A0A1B0GWG9 222 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 HBDP02042 147 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 HMGN1P05114 100 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 SLC25A5P05141 298 aaKnown RBP1.53□□□□□ -2.16
GPNMB-205ENST00000463011 SAA1P0DJI8 122 aaPredicted RBP1.53□□□□□ -2.16
GPNMB-205ENST00000463011 DIAPH2-AS1Q14236 149 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 MDC1Q14676 2089 aaKnown RBP1.53□□□□□ -2.16
GPNMB-205ENST00000463011 KRTAP26-1Q6PEX3 210 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 ZNF431Q8TF32 576 aaPredicted RBP1.53□□□□□ -2.16
GPNMB-205ENST00000463011 PSMF1Q92530 271 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 LINC00052Q96N35 136 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 CST11Q9H112 138 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 ORMDL1Q9P0S3 153 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 COPZ2Q9P299 210 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
GPNMB-205ENST00000463011 MGAMO43451 1857 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 IGKV3D-7A0A0C4DH55 119 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 IGKV3OR2-268A0A0C4DH90 116 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 C3orf85A0A1B0GTC6 90 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 TRBV6-4A0A1B0GX49 114 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 F8W1H4 67 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 UQCRQO14949 82 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 SLC25A4P12235 298 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 BLCAPP62952 87 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 HIST1H1AQ02539 215 aaPredicted RBP1.52□□□□□ -2.17
GPNMB-205ENST00000463011 HAGHLQ6PII5 290 aaPredicted RBP1.52□□□□□ -2.17
GPNMB-205ENST00000463011 UNQ6190/PRO20217Q6UXQ8 127 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 TEN1Q86WV5 123 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 LINC00269Q8N2A0 174 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 FAM19A2Q8N3H0 131 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 NABP2Q9BQ15 211 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 SMIM3Q9BZL3 60 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 EML6Q6ZMW3 1958 aa1.52□□□□□ -2.17
GPNMB-205ENST00000463011 HIVEP2P31629 2446 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 RFX7Q2KHR2 1363 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 MICAL3Q7RTP6 2002 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 BAHCC1Q9P281 2608 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 A0A096LPI6 279 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 COX4I1P13073 169 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 LSM3P62310 102 aaKnown RBP1.51□□□□□ -2.17
GPNMB-205ENST00000463011 MIR22HGQ0VDD5 57 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 CASC2Q6XLA1 102 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 ZCCHC23Q6ZST2 131 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 COL11A1P12107 1806 aaPredicted RBP1.51□□□□□ -2.17
GPNMB-205ENST00000463011 FN1P02751 2386 aaKnown RBP1.51□□□□□ -2.17
GPNMB-205ENST00000463011 LAMB4A4D0S4 1761 aa1.51□□□□□ -2.17
GPNMB-205ENST00000463011 BRWD1Q9NSI6 2320 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 XIRP1Q702N8 1843 aaKnown RBP1.5□□□□□ -2.17
GPNMB-205ENST00000463011 COL24A1Q17RW2 1714 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 LOC107984156A0A0G2JMH3 177 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 H3BRM9 83 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 DNAL4O96015 105 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 MPC1LP0DKB6 136 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 COX7CP15954 63 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 SNRPD3P62318 126 aaKnown RBP1.5□□□□□ -2.17
GPNMB-205ENST00000463011 MPV17LQ2QL34 196 aa1.5□□□□□ -2.17
GPNMB-205ENST00000463011 SPRNQ5BIV9 151 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms