RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	HIST1H2BN	Q99877	126 aa		9.26	□□□□□ -0.93
RBM39-223	ENST00000463004	HIST1H2BM	Q99879	126 aa		9.26	□□□□□ -0.93
RBM39-223	ENST00000463004	PROP1	O75360	226 aa		9.26	□□□□□ -0.93
RBM39-223	ENST00000463004	ADM	P35318	185 aa		9.26	□□□□□ -0.93
RBM39-223	ENST00000463004	C19orf54	Q5BKX5	351 aa		9.26	□□□□□ -0.93
RBM39-223	ENST00000463004	DPH3P1	Q9H4G8	78 aa		9.26	□□□□□ -0.93
RBM39-223	ENST00000463004	TSSC4	Q9Y5U2	329 aa	Predicted RBP	9.26	□□□□□ -0.93
RBM39-223	ENST00000463004	UBE2C	O00762	179 aa		9.26	□□□□□ -0.93
RBM39-223	ENST00000463004	LINC00614	P0C842	121 aa		9.26	□□□□□ -0.93
RBM39-223	ENST00000463004	CHD3	Q12873	2000 aa	Known RBP	9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	TMEM238L	A0A1B0GVL6	79 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004		A6NJY4	79 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	IGKV1-17	P01599	117 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	PFN1	P07737	140 aa	Known RBP	9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	SRSF2	Q01130	221 aa	Known RBP	9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	C12orf54	Q6X4T0	127 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	MAPK1IP1L	Q8NDC0	245 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	NUP35	Q8NFH5	326 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	UBE2E2	Q96LR5	201 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	DMRT1	Q9Y5R6	373 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004		M0R3E3	92 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	HBD	P02042	147 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	TMEM101	Q96IK0	257 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004		C9JQL5	133 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	LY6L	H3BQJ8	138 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	MUC21	Q5SSG8	566 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	LINC00518	Q8N0U6	118 aa		9.25	□□□□□ -0.93
RBM39-223	ENST00000463004	CPAMD8	Q8IZJ3	1885 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	ZNF324	O75467	553 aa	Predicted RBP	9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	FBLN7	Q53RD9	439 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	IL17REL	Q6ZVW7	336 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	PRR25	Q96S07	402 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	PAM16	Q9Y3D7	125 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	CACNA1A	O00555	2505 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	FCN3	O75636	299 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	GLMP	Q8WWB7	406 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	PRO1933	Q9H354	126 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	RHOD	O00212	210 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	CXCL1	P09341	107 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	LYZL1	Q6UWQ5	148 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	TRGV2	A0A075B6R0	118 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	WI2-2373I1.2	A0A1W2PRP0	233 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	FAM181B	A6NEQ2	426 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	PRSS46	E5RG02	174 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	9.24	□□□□□ -0.93
RBM39-223	ENST00000463004		J3QR89	54 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	SLC25A34	Q6PIV7	304 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	C2orf88	Q9BSF0	95 aa		9.24	□□□□□ -0.93
RBM39-223	ENST00000463004	TCTEX1D4	Q5JR98	221 aa		9.23	□□□□□ -0.93
RBM39-223	ENST00000463004	SCGB3A1	Q96QR1	104 aa		9.23	□□□□□ -0.93
RBM39-223	ENST00000463004	SERF1A	O75920	110 aa		9.23	□□□□□ -0.93
RBM39-223	ENST00000463004	CFHR4	Q92496	578 aa		9.23	□□□□□ -0.93
RBM39-223	ENST00000463004	PRDM13	Q9H4Q3	707 aa		9.23	□□□□□ -0.93
RBM39-223	ENST00000463004		H3BVH4	76 aa		9.23	□□□□□ -0.93
RBM39-223	ENST00000463004	SPATA45	Q537H7	98 aa		9.23	□□□□□ -0.93
RBM39-223	ENST00000463004	CYSLTR1	Q9Y271	337 aa		9.23	□□□□□ -0.93
RBM39-223	ENST00000463004	TRBV6-1	A0A0K0K1D8	114 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	CRYGB	P07316	175 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	CTSG	P08311	255 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	DMRTA1	Q5VZB9	504 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	GPHB5	Q86YW7	130 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	NCOR2	Q9Y618	2525 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	DOCK11	Q5JSL3	2073 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	OR11H1	Q8NG94	326 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	MRAP2	Q96G30	205 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	TRAV8-1	A0A0A6YYK1	113 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	CD33	P20138	364 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	BRWD1-AS2	P59051	145 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	VAMP3	Q15836	100 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	DNLZ	Q5SXM8	178 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	GEMIN7	Q9H840	131 aa	Known RBP	9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	IGF1	P05019	195 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004		Q0VG73	95 aa		9.22	□□□□□ -0.93
RBM39-223	ENST00000463004	SRSF9	Q13242	221 aa	Known RBP eCLIP	9.22	□□□□□ -0.93	5e-10	■■■■□ 22.3
RBM39-223	ENST00000463004	KMT2E	Q8IZD2	1858 aa		9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	C5orf52	A6NGY3	159 aa		9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	LTA	P01374	205 aa		9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	GP9	P14770	177 aa		9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	RCHY1	Q96PM5	261 aa		9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	DEFB131A	P59861	70 aa		9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	CIRBP	Q14011	172 aa	Known RBP	9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	FOXI2	Q6ZQN5	318 aa		9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	RNF152	Q8N8N0	203 aa		9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	ALKBH7	Q9BT30	221 aa	Predicted RBP	9.21	□□□□□ -0.93
RBM39-223	ENST00000463004	TRAV25	A0A0B4J276	109 aa		9.21	□□□□□ -0.94
RBM39-223	ENST00000463004	C11orf44	Q8N8P7	122 aa		9.21	□□□□□ -0.94
RBM39-223	ENST00000463004		Q8TAT8	98 aa		9.21	□□□□□ -0.94
RBM39-223	ENST00000463004	RITA1	Q96K30	269 aa		9.21	□□□□□ -0.94
RBM39-223	ENST00000463004	SMIM27	A0A1W2PRY6	76 aa		9.21	□□□□□ -0.94
RBM39-223	ENST00000463004	C7orf71	A4D174	169 aa		9.21	□□□□□ -0.94
RBM39-223	ENST00000463004		H3BRM9	83 aa		9.21	□□□□□ -0.94
RBM39-223	ENST00000463004	CA1	P00915	261 aa	Predicted RBP	9.2	□□□□□ -0.94
RBM39-223	ENST00000463004	C16orf54	Q6UWD8	224 aa		9.2	□□□□□ -0.94
RBM39-223	ENST00000463004	OR11H2	Q8NH07	326 aa		9.2	□□□□□ -0.94
RBM39-223	ENST00000463004	SPAG8	Q99932	426 aa	Predicted RBP	9.2	□□□□□ -0.94
RBM39-223	ENST00000463004	VCY	O14598	125 aa		9.2	□□□□□ -0.94
RBM39-223	ENST00000463004	IFI27	P40305	119 aa	Predicted RBP	9.2	□□□□□ -0.94
RBM39-223	ENST00000463004		Q1RN00	199 aa		9.2	□□□□□ -0.94
RBM39-223	ENST00000463004	C3orf56	Q8N813	242 aa		9.2	□□□□□ -0.94

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