RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 FAM106AQ4KMX7 169 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 ZNF562Q6V9R5 426 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 ADAMTSL5Q6ZMM2 481 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 TTC9CQ8N5M4 171 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 Q8N8P6 123 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 LY6G5BQ8NDX9 201 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 OR11H6Q8NGC7 330 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 Q8TAT8 98 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 PIFOQ8TCI5 191 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 RAX2Q96IS3 184 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 PRR25Q96S07 402 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 CITED2Q99967 270 aaPredicted RBP2.75□□□□□ -1.97
COL8A1-204ENST00000462604 SLC50A1Q9BRV3 221 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 CHAC1Q9BUX1 264 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 CNFNQ9BYD5 112 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 CSTL1Q9H114 145 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 MEGF9Q9H1U4 602 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 HIGD1BQ9P298 99 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 SDK2Q58EX2 2172 aa2.75□□□□□ -1.97
COL8A1-204ENST00000462604 CABIN1Q9Y6J0 2220 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 CEP192Q8TEP8 1941 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 CEP290O15078 2479 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.74□□□□□ -1.97
COL8A1-204ENST00000462604 A0A1W2PRD5 423 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 A0A1W2PRF3 423 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 A0A1W2PRM7 423 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 NCBP2LA6PVI3 153 aaKnown RBP2.74□□□□□ -1.97
COL8A1-204ENST00000462604 ODF3BA8MYP8 253 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 LYNX1G3V0Z9 82 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 G3V4G9 280 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 J3QR89 54 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 SAP30O75446 220 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 IGHV3-23P01764 117 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 LYNX1P0DP58 116 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 PRB4P10163 310 aaPredicted RBP2.74□□□□□ -1.97
COL8A1-204ENST00000462604 EVI2AP22794 236 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 PLNP26678 52 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 RIPPLY3P57055 190 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 FXYD7P58549 80 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 TNP2Q05952 138 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 PAX8Q06710 450 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 SRSF1Q07955 248 aaKnown RBP eCLIP2.74□□□□□ -1.97
COL8A1-204ENST00000462604 KLRD1Q13241 179 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 TAL2Q16559 108 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 KLF17Q5JT82 389 aaPredicted RBP2.74□□□□□ -1.97
COL8A1-204ENST00000462604 TMEM78Q5T7P6 136 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 MINOS1Q5TGZ0 78 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 NEGR1Q7Z3B1 354 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 WFDC3Q8IUB2 231 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 PCP2Q8IVA1 136 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 BCL6BQ8N143 479 aaPredicted RBP2.74□□□□□ -1.97
COL8A1-204ENST00000462604 MYOZ3Q8TDC0 251 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 RAB37Q96AX2 223 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 MRPL53Q96EL3 112 aaKnown RBP2.74□□□□□ -1.97
COL8A1-204ENST00000462604 RNF185Q96GF1 192 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 C18orf15Q96N68 181 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 FANCD2OSQ96PS1 177 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 FOXC2Q99958 501 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 VGLL1Q99990 258 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 NAA38Q9BRA0 125 aaKnown RBP2.74□□□□□ -1.97
COL8A1-204ENST00000462604 SPXQ9BT56 116 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 ZFAND3Q9H8U3 227 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 HIF1ANQ9NWT6 349 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 DKK2Q9UBU2 259 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 MINOS1-NBL1R4GNA1 71 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 S4R3C0 116 aa2.74□□□□□ -1.97
COL8A1-204ENST00000462604 CHD3Q12873 2000 aaKnown RBP2.74□□□□□ -1.97
COL8A1-204ENST00000462604 FAM90A27PA6NNH2 459 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 RNF223E7ERA6 249 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 F8W735 103 aaPredicted RBP2.73□□□□□ -1.97
COL8A1-204ENST00000462604 ZNF207O43670 478 aaKnown RBP2.73□□□□□ -1.97
COL8A1-204ENST00000462604 PRTN3P24158 256 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 HLA-DMBP28068 263 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 ZNF80P51504 273 aaPredicted RBP2.73□□□□□ -1.97
COL8A1-204ENST00000462604 FXYD2P54710 66 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 RPL24P83731 157 aaKnown RBP2.73□□□□□ -1.97
COL8A1-204ENST00000462604 NDPQ00604 133 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 ERCC8Q13216 396 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 FOXE3Q13461 319 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 LAGE3Q14657 143 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 PRSS57Q6UWY2 283 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 IL17RELQ6ZVW7 336 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 VMO1Q7Z5L0 202 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 GTSCR1Q86UQ5 136 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 DTX2Q86UW9 622 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 CEND1Q8N111 149 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 DYNAPQ8N1N2 210 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 Q8N6K4 173 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 Q8NA96 180 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 FAM110DQ8TAY7 271 aaPredicted RBP2.73□□□□□ -1.97
COL8A1-204ENST00000462604 TMEM158Q8WZ71 300 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 EEF1AKMT3Q96AZ1 226 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 MRAP2Q96G30 205 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 METTL26Q96S19 204 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 VKORC1Q9BQB6 163 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 UFC1Q9Y3C8 167 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 SMAD5-AS1Q9Y6J3 95 aa2.73□□□□□ -1.97
COL8A1-204ENST00000462604 LAMA1P25391 3075 aa2.72□□□□□ -1.97
COL8A1-204ENST00000462604 MYO7BQ6PIF6 2116 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 582.3 ms