RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 OR4C45A6NMZ5 311 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 BHLHE40O14503 412 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 COX7A2LO14548 114 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 CHP2O43745 196 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 OR2T1O43869 369 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 OR5F1O95221 314 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 FAM107AO95990 144 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 IFNA5P01569 189 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 IFNA14P01570 189 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 REG1AP05451 166 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 CRHP06850 196 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 P0DMU3 169 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 FAM231AP0DMU4 169 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 FAM231CP0DMU5 169 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 CD79AP11912 226 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 IFI30P13284 250 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 ALOX5APP20292 161 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 NKX2-5P52952 324 aaPredicted RBP1.6□□□□□ -2.15
CLK1-206ENST00000461326 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 SELENOWP63302 87 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 H3F3AP84243 136 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 ZNF90Q03938 601 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 RGS21Q2M5E4 152 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 LRRC75BQ2VPJ9 315 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 OR10K2Q6IF99 312 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 AAED1Q7RTV5 226 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 SLC35B4Q969S0 331 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 MED29Q9NX70 200 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 RSL24D1Q9UHA3 163 aaKnown RBP1.6□□□□□ -2.15
CLK1-206ENST00000461326 MED31Q9Y3C7 131 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 SAMHD1Q9Y3Z3 626 aaKnown RBP1.6□□□□□ -2.15
CLK1-206ENST00000461326 FAM32AQ9Y421 112 aaKnown RBP1.6□□□□□ -2.15
CLK1-206ENST00000461326 ANKRD17O75179 2603 aaKnown RBP1.6□□□□□ -2.15
CLK1-206ENST00000461326 UNC79Q9P2D8 2635 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 PTPN13Q12923 2485 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 DOPEY1Q5JWR5 2465 aa1.6□□□□□ -2.15
CLK1-206ENST00000461326 PCNX1Q96RV3 2341 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 IGLV3-9A0A075B6K5 115 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 DEFB108AA8MXU0 73 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 H3BRN7 92 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 H7C1C5 153 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 GNGT2O14610 69 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 CDC42EP2O14613 210 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 GADD45GO95257 159 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 ASAH2BP0C7U1 165 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 CRYGSP22914 178 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 HINT1P49773 126 aaPredicted RBP1.59□□□□□ -2.15
CLK1-206ENST00000461326 EMP1P54849 157 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 LCN6P62502 163 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 RPL18Q07020 188 aaKnown RBP1.59□□□□□ -2.15
CLK1-206ENST00000461326 Q6ZTI0 123 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 DHFR2Q86XF0 187 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 LRRC18Q8N456 261 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 OR4X2Q8NGF9 303 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 ASB17Q8WXJ9 295 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 SLC7A6Q92536 515 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 MUCL1Q96DR8 90 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 TSPAN32Q96QS1 320 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 CCL19Q99731 98 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 NMNAT1Q9HAN9 279 aaPredicted RBP1.59□□□□□ -2.15
CLK1-206ENST00000461326 PRO2289Q9P1D8 64 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 ANAPC10Q9UM13 185 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 PRELID1Q9Y255 219 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 PXMP4Q9Y6I8 212 aa1.59□□□□□ -2.15
CLK1-206ENST00000461326 ZNF469Q96JG9 3925 aaPredicted RBP1.59□□□□□ -2.16
CLK1-206ENST00000461326 FLNBO75369 2602 aaKnown RBP1.59□□□□□ -2.16
CLK1-206ENST00000461326 POLEQ07864 2286 aa1.59□□□□□ -2.16
CLK1-206ENST00000461326 ARHGAP32A7KAX9 2087 aa1.59□□□□□ -2.16
CLK1-206ENST00000461326 FREM1Q5H8C1 2179 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 SPTAN1Q13813 2472 aaKnown RBP1.58□□□□□ -2.16
CLK1-206ENST00000461326 IGHV3-64A0A075B6Q5 118 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 IGKV1D-43A0A0B4J1Z2 117 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 TRAV41A0A0B4J266 112 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 IGHV1-18A0A0C4DH31 117 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 DPRXA6NFQ7 191 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 ATP6V1G2-DDX39BF2Z307 99 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 E2F6O75461 281 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 ATP5HO75947 161 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 UBL3O95164 117 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 IGF2P01344 180 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 OR5G3P0C626 314 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 HIST1H1EP10412 219 aaKnown RBP1.58□□□□□ -2.16
CLK1-206ENST00000461326 PSMB8P28062 276 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 GUCA1AP43080 201 aaPredicted RBP1.58□□□□□ -2.16
CLK1-206ENST00000461326 OMPP47874 163 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 IDH3GP51553 393 aaPredicted RBP1.58□□□□□ -2.16
CLK1-206ENST00000461326 TCL1AP56279 114 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 SMIM11AP58511 58 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 FXYD6P3P58550 94 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 TNFAIP6P98066 277 aaPredicted RBP1.58□□□□□ -2.16
CLK1-206ENST00000461326 PRDX4Q13162 271 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 KRR1Q13601 381 aaKnown RBP1.58□□□□□ -2.16
CLK1-206ENST00000461326 NCMAPQ5T1S8 102 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 LYZL1Q6UWQ5 148 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 SLC35E3Q7Z769 313 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 C20orf196Q8IYI0 205 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 DEFB125Q8N687 156 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 CLDN22Q8N7P3 220 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 OR52L1Q8NGH7 329 aa1.58□□□□□ -2.16
CLK1-206ENST00000461326 GNPDA2Q8TDQ7 276 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms