RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 OR10J6PQ8NGY7 276 aa16.14■□□□□ 0.17
TRAF4-207ENST00000461195 SCGB1C1Q8TD33 95 aa16.14■□□□□ 0.17
TRAF4-207ENST00000461195 TRAV10A0A0B4J240 114 aa16.13■□□□□ 0.17
TRAF4-207ENST00000461195 SPART-AS1P0CW21 52 aa16.13■□□□□ 0.17
TRAF4-207ENST00000461195 PYYP10082 97 aa16.13■□□□□ 0.17
TRAF4-207ENST00000461195 SLC25A2Q9BXI2 301 aa16.13■□□□□ 0.17
TRAF4-207ENST00000461195 MRPL32Q9BYC8 188 aaKnown RBP16.13■□□□□ 0.17
TRAF4-207ENST00000461195 TRAV12-2A0A075B6T6 113 aa16.12■□□□□ 0.17
TRAF4-207ENST00000461195 LOC102723971A0A1B0GUV8 181 aa16.12■□□□□ 0.17
TRAF4-207ENST00000461195 PRAC2D3DTV9 90 aa16.12■□□□□ 0.17
TRAF4-207ENST00000461195 PDE6HQ13956 83 aa16.12■□□□□ 0.17
TRAF4-207ENST00000461195 ZNF767PQ75MW2 155 aa16.12■□□□□ 0.17
TRAF4-207ENST00000461195 MIR17HGQ75NE6 70 aa16.12■□□□□ 0.17
TRAF4-207ENST00000461195 TIMM9Q9Y5J7 89 aa16.12■□□□□ 0.17
TRAF4-207ENST00000461195 TCTAP57738 103 aa16.11■□□□□ 0.17
TRAF4-207ENST00000461195 FAM167A-AS1Q96KT0 104 aa16.11■□□□□ 0.17
TRAF4-207ENST00000461195 PARD6GQ9BYG4 376 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-207ENST00000461195 TEX48A0A1B0GUV7 120 aa16.1■□□□□ 0.17
TRAF4-207ENST00000461195 IGLL5B9A064 214 aa16.1■□□□□ 0.17
TRAF4-207ENST00000461195 CDKN1BP46527 198 aa16.1■□□□□ 0.17
TRAF4-207ENST00000461195 RGS21Q2M5E4 152 aa16.1■□□□□ 0.17
TRAF4-207ENST00000461195 FFAR4Q5NUL3 377 aa16.1■□□□□ 0.17
TRAF4-207ENST00000461195 BLNKQ8WV28 456 aa16.1■□□□□ 0.17
TRAF4-207ENST00000461195 MRPL53Q96EL3 112 aaKnown RBP16.1■□□□□ 0.17
TRAF4-207ENST00000461195 DKK2Q9UBU2 259 aa16.1■□□□□ 0.17
TRAF4-207ENST00000461195 FUT9Q9Y231 359 aa16.1■□□□□ 0.17
TRAF4-207ENST00000461195 PRELID1Q9Y255 219 aa16.1■□□□□ 0.17
TRAF4-207ENST00000461195 NDUFB4O95168 129 aa16.09■□□□□ 0.17
TRAF4-207ENST00000461195 FAM222AQ5U5X8 452 aa16.09■□□□□ 0.17
TRAF4-207ENST00000461195 TMEM256Q8N2U0 113 aa16.09■□□□□ 0.17
TRAF4-207ENST00000461195 RPP25LQ8N5L8 163 aaKnown RBP16.09■□□□□ 0.17
TRAF4-207ENST00000461195 OR51M1Q9H341 326 aa16.09■□□□□ 0.17
TRAF4-207ENST00000461195 WFDC1Q9HC57 220 aa16.09■□□□□ 0.17
TRAF4-207ENST00000461195 YTHDF2Q9Y5A9 579 aaKnown RBP16.09■□□□□ 0.17
TRAF4-207ENST00000461195 DEFB131BA0A096LNP1 70 aa16.08■□□□□ 0.16
TRAF4-207ENST00000461195 ZNF705GA8MUZ8 300 aaPredicted RBP16.08■□□□□ 0.16
TRAF4-207ENST00000461195 TSPOP30536 169 aa16.08■□□□□ 0.16
TRAF4-207ENST00000461195 ASB13Q8WXK3 278 aa16.08■□□□□ 0.16
TRAF4-207ENST00000461195 PAXXQ9BUH6 204 aa16.08■□□□□ 0.16
TRAF4-207ENST00000461195 M0R3E3 92 aa16.07■□□□□ 0.16
TRAF4-207ENST00000461195 GIPP09681 153 aaPredicted RBP16.07■□□□□ 0.16
TRAF4-207ENST00000461195 NBEAP1P0C6P0 100 aa16.07■□□□□ 0.16
TRAF4-207ENST00000461195 LGALS9CQ6DKI2 356 aa16.07■□□□□ 0.16
TRAF4-207ENST00000461195 LINC01587Q99440 93 aa16.07■□□□□ 0.16
TRAF4-207ENST00000461195 NIPSNAP3BQ9BS92 247 aa16.07■□□□□ 0.16
TRAF4-207ENST00000461195 AAMDCQ9H7C9 122 aa16.07■□□□□ 0.16
TRAF4-207ENST00000461195 NPIPB6E9PJ23 425 aa16.06■□□□□ 0.16
TRAF4-207ENST00000461195 PRM2P04554 102 aa16.06■□□□□ 0.16
TRAF4-207ENST00000461195 EXOC3-AS1Q8N2X6 119 aa16.06■□□□□ 0.16
TRAF4-207ENST00000461195 ODF3Q96PU9 254 aa16.06■□□□□ 0.16
TRAF4-207ENST00000461195 APLNQ9ULZ1 77 aa16.06■□□□□ 0.16
TRAF4-207ENST00000461195 OR7C2O60412 319 aa16.05■□□□□ 0.16
TRAF4-207ENST00000461195 OR10J4P0C629 311 aa16.05■□□□□ 0.16
TRAF4-207ENST00000461195 RNF141Q8WVD5 230 aa16.05■□□□□ 0.16
TRAF4-207ENST00000461195 FXYD5Q96DB9 178 aa16.05■□□□□ 0.16
TRAF4-207ENST00000461195 AQP10Q96PS8 301 aa16.05■□□□□ 0.16
TRAF4-207ENST00000461195 C20orf144Q9BQM9 153 aa16.05■□□□□ 0.16
TRAF4-207ENST00000461195 IGHV4-4A0A075B6R2 117 aa16.04■□□□□ 0.16
TRAF4-207ENST00000461195 CT45A10P0DMU9 189 aa16.04■□□□□ 0.16
TRAF4-207ENST00000461195 LEPP41159 167 aa16.04■□□□□ 0.16
TRAF4-207ENST00000461195 TAS2R60P59551 318 aa16.04■□□□□ 0.16
TRAF4-207ENST00000461195 ICAM4Q14773 271 aa16.04■□□□□ 0.16
TRAF4-207ENST00000461195 OXA1LQ15070 435 aa16.04■□□□□ 0.16
TRAF4-207ENST00000461195 TAS2R45P59539 299 aa16.03■□□□□ 0.16
TRAF4-207ENST00000461195 ZNF266Q14584 549 aa16.03■□□□□ 0.16
TRAF4-207ENST00000461195 KIR3DS1Q14943 382 aa16.03■□□□□ 0.16
TRAF4-207ENST00000461195 ACOT6Q3I5F7 207 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-207ENST00000461195 KHDC3LQ587J8 217 aa16.03■□□□□ 0.16
TRAF4-207ENST00000461195 PLA2G2EQ9NZK7 142 aa16.03■□□□□ 0.16
TRAF4-207ENST00000461195 H7BYZ3 331 aa16.02■□□□□ 0.16
TRAF4-207ENST00000461195 HTN1P15515 57 aa16.02■□□□□ 0.16
TRAF4-207ENST00000461195 AZU1P20160 251 aa16.02■□□□□ 0.16
TRAF4-207ENST00000461195 Q5BKY6 102 aa16.02■□□□□ 0.16
TRAF4-207ENST00000461195 GFI1BQ5VTD9 330 aa16.02■□□□□ 0.16
TRAF4-207ENST00000461195 FAM122CQ6P4D5 195 aa16.02■□□□□ 0.16
TRAF4-207ENST00000461195 LYRM9A8MSI8 78 aa16.01■□□□□ 0.15
TRAF4-207ENST00000461195 M6PRP20645 277 aa16.01■□□□□ 0.15
TRAF4-207ENST00000461195 DAD1P61803 113 aa16.01■□□□□ 0.15
TRAF4-207ENST00000461195 UBE2L3P68036 154 aaKnown RBP16.01■□□□□ 0.15
TRAF4-207ENST00000461195 ERCC8Q13216 396 aa16.01■□□□□ 0.15
TRAF4-207ENST00000461195 ZNF503Q96F45 646 aa16.01■□□□□ 0.15
TRAF4-207ENST00000461195 PHYHIPLQ96FC7 376 aa16.01■□□□□ 0.15
TRAF4-207ENST00000461195 LINC00477Q96M19 166 aa16.01■□□□□ 0.15
TRAF4-207ENST00000461195 J3KRW8 73 aa16■□□□□ 0.15
TRAF4-207ENST00000461195 C16orf74Q96GX8 76 aa16■□□□□ 0.15
TRAF4-207ENST00000461195 A0A1W2PPV4 95 aa15.99■□□□□ 0.15
TRAF4-207ENST00000461195 PLAC8L1A1L4L8 177 aa15.99■□□□□ 0.15
TRAF4-207ENST00000461195 ZNF493Q6ZR52 646 aa15.99■□□□□ 0.15
TRAF4-207ENST00000461195 C9orf47Q6ZRZ4 202 aa15.99■□□□□ 0.15
TRAF4-207ENST00000461195 LYPD1Q8N2G4 141 aa15.99■□□□□ 0.15
TRAF4-207ENST00000461195 INO80EQ8NBZ0 244 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-207ENST00000461195 NDUFAF3Q9BU61 184 aa15.99■□□□□ 0.15
TRAF4-207ENST00000461195 AGPAT4-IT1Q9H0P7 198 aa15.99■□□□□ 0.15
TRAF4-207ENST00000461195 IGKV2-40A0A087WW87 121 aaPredicted RBP15.98■□□□□ 0.15
TRAF4-207ENST00000461195 IGKV2D-40P01614 121 aaPredicted RBP15.98■□□□□ 0.15
TRAF4-207ENST00000461195 RANP62826 216 aaKnown RBP15.98■□□□□ 0.15
TRAF4-207ENST00000461195 HSD17B11Q8NBQ5 300 aa15.98■□□□□ 0.15
TRAF4-207ENST00000461195 OR2T35Q8NGX2 323 aa15.98■□□□□ 0.15
TRAF4-207ENST00000461195 FXYD6-FXYD2A0A087WZ82 144 aa15.97■□□□□ 0.15
TRAF4-207ENST00000461195 TRAV12-3A0A0B4J271 114 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms