RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 ACTL10Q5JWF8 245 aa10.17□□□□□ -0.78
CHRD-209ENST00000461120 FOXI2Q6ZQN5 318 aa10.17□□□□□ -0.78
CHRD-209ENST00000461120 ZNF738Q8NE65 137 aa10.17□□□□□ -0.78
CHRD-209ENST00000461120 MAP1LC3BQ9GZQ8 125 aa10.17□□□□□ -0.78
CHRD-209ENST00000461120 LOC102724200A0A096LPH7 203 aaPredicted RBP10.16□□□□□ -0.78
CHRD-209ENST00000461120 F6UB75 175 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 RPL35AP18077 110 aaKnown RBP10.16□□□□□ -0.78
CHRD-209ENST00000461120 SULT1A2P50226 295 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 RAB5CP51148 216 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 STHQ8IWL8 128 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 EXOC3-AS1Q8N2X6 119 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 SUN5Q8TC36 379 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 MBD3L1Q8WWY6 194 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 RPUSD4Q96CM3 377 aaKnown RBP10.16□□□□□ -0.78
CHRD-209ENST00000461120 B9D2Q9BPU9 175 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 SAV1Q9H4B6 383 aaPredicted RBP10.16□□□□□ -0.78
CHRD-209ENST00000461120 TMEM167BQ9NRX6 74 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 U3KQK5 164 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 CSMD3Q7Z407 3707 aa10.16□□□□□ -0.78
CHRD-209ENST00000461120 A0A0J9YX75 114 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 ZNF705FA8MVS1 300 aaPredicted RBP10.15□□□□□ -0.78
CHRD-209ENST00000461120 H3BMM0 161 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 HLA-DRB4P13762 266 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 FGF8P55075 233 aaPredicted RBP10.15□□□□□ -0.78
CHRD-209ENST00000461120 RANP62826 216 aaKnown RBP10.15□□□□□ -0.78
CHRD-209ENST00000461120 ICAM4Q14773 271 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 FAM74A1Q5RGS3 127 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 GDF5OSQ5U4N7 250 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 EBLN2Q6P2I7 272 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 TRPT1Q86TN4 253 aaKnown RBP10.15□□□□□ -0.78
CHRD-209ENST00000461120 IQCF2Q8IXL9 164 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 LYPD1Q8N2G4 141 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 MRPL53Q96EL3 112 aaKnown RBP10.15□□□□□ -0.78
CHRD-209ENST00000461120 AAMDCQ9H7C9 122 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 PRELID1Q9Y255 219 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 HLA-DRB4X5D2U9 266 aa10.15□□□□□ -0.78
CHRD-209ENST00000461120 AGRNO00468 2067 aa10.14□□□□□ -0.79
CHRD-209ENST00000461120 PRAC2D3DTV9 90 aa10.14□□□□□ -0.79
CHRD-209ENST00000461120 M0R3E3 92 aa10.14□□□□□ -0.79
CHRD-209ENST00000461120 H2AFB1P0C5Y9 115 aa10.14□□□□□ -0.79
CHRD-209ENST00000461120 NHLRC4P0CG21 123 aaPredicted RBP10.14□□□□□ -0.79
CHRD-209ENST00000461120 PRB4P10163 310 aaPredicted RBP10.14□□□□□ -0.79
CHRD-209ENST00000461120 ALKAL2Q6UX46 152 aa10.14□□□□□ -0.79
CHRD-209ENST00000461120 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
CHRD-209ENST00000461120 Q9H3A6 140 aa10.14□□□□□ -0.79
CHRD-209ENST00000461120 TMPRSS5Q9H3S3 457 aa10.14□□□□□ -0.79
CHRD-209ENST00000461120 ZNF705DP0CH99 300 aaPredicted RBP10.13□□□□□ -0.79
CHRD-209ENST00000461120 ZNF705BP0CI00 300 aaPredicted RBP10.13□□□□□ -0.79
CHRD-209ENST00000461120 HAGHQ16775 308 aa10.13□□□□□ -0.79
CHRD-209ENST00000461120 OR8A1Q8NGG7 326 aa10.13□□□□□ -0.79
CHRD-209ENST00000461120 OTORQ9NRC9 128 aa10.13□□□□□ -0.79
CHRD-209ENST00000461120 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 PGPA6NDG6 321 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 DUSP14O95147 198 aaKnown RBP10.12□□□□□ -0.79
CHRD-209ENST00000461120 CNN1P51911 297 aaKnown RBP10.12□□□□□ -0.79
CHRD-209ENST00000461120 APOC4P55056 127 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 HIST1H1AQ02539 215 aaPredicted RBP10.12□□□□□ -0.79
CHRD-209ENST00000461120 SBSPONQ8IVN8 264 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 OR4B1Q8NGF8 309 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 KIR2DL5BQ8NHK3 375 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 MUC7Q8TAX7 377 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 CLUHP3Q96NS8 147 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 ASCL2Q99929 193 aa10.12□□□□□ -0.79
CHRD-209ENST00000461120 A0A1B0GV50 99 aa10.11□□□□□ -0.79
CHRD-209ENST00000461120 A8MTW9 85 aa10.11□□□□□ -0.79
CHRD-209ENST00000461120 IGKV3-20P01619 116 aa10.11□□□□□ -0.79
CHRD-209ENST00000461120 MORN3Q6PF18 240 aaPredicted RBP10.11□□□□□ -0.79
CHRD-209ENST00000461120 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
CHRD-209ENST00000461120 TRAV1-1A0A0B4J248 108 aa10.1□□□□□ -0.79
CHRD-209ENST00000461120 A0A1W2PRE2 83 aa10.1□□□□□ -0.79
CHRD-209ENST00000461120 ZNF705EA8MWA4 302 aaPredicted RBP10.1□□□□□ -0.79
CHRD-209ENST00000461120 CSN1S1P47710 185 aa10.1□□□□□ -0.79
CHRD-209ENST00000461120 UBE2G2P60604 165 aa10.1□□□□□ -0.79
CHRD-209ENST00000461120 AMTNQ6UX39 209 aa10.1□□□□□ -0.79
CHRD-209ENST00000461120 OR10J6PQ8NGY7 276 aa10.1□□□□□ -0.79
CHRD-209ENST00000461120 RXFP4Q8TDU9 374 aa10.1□□□□□ -0.79
CHRD-209ENST00000461120 YTHDF2Q9Y5A9 579 aaKnown RBP10.1□□□□□ -0.79
CHRD-209ENST00000461120 DNAH7Q8WXX0 4024 aa10.1□□□□□ -0.79
CHRD-209ENST00000461120 IGKV2-40A0A087WW87 121 aaPredicted RBP10.09□□□□□ -0.79
CHRD-209ENST00000461120 FAM74A7A6NL05 159 aa10.09□□□□□ -0.79
CHRD-209ENST00000461120 GGTLC3B5MD39 225 aa10.09□□□□□ -0.79
CHRD-209ENST00000461120 NPIPB6E9PJ23 425 aa10.09□□□□□ -0.79
CHRD-209ENST00000461120 UBE2CO00762 179 aa10.09□□□□□ -0.79
CHRD-209ENST00000461120 CA1P00915 261 aaPredicted RBP10.09□□□□□ -0.79
CHRD-209ENST00000461120 IGKV2D-40P01614 121 aaPredicted RBP10.09□□□□□ -0.79
CHRD-209ENST00000461120 HBE1P02100 147 aa10.09□□□□□ -0.79
CHRD-209ENST00000461120 GIG44P09565 113 aaPredicted RBP10.09□□□□□ -0.79
CHRD-209ENST00000461120 CCL20P78556 96 aa10.09□□□□□ -0.79
CHRD-209ENST00000461120 DIRC3C9JPN6 131 aa10.08□□□□□ -0.8
CHRD-209ENST00000461120 TEX46H3BTG2 121 aa10.08□□□□□ -0.8
CHRD-209ENST00000461120 SLC25A5P05141 298 aaKnown RBP10.08□□□□□ -0.8
CHRD-209ENST00000461120 NUTF2P61970 127 aaKnown RBP10.08□□□□□ -0.8
CHRD-209ENST00000461120 SUMO1P63165 101 aaKnown RBP10.08□□□□□ -0.8
CHRD-209ENST00000461120 BLOC1S1P78537 153 aa10.08□□□□□ -0.8
CHRD-209ENST00000461120 ERCC8Q13216 396 aa10.08□□□□□ -0.8
CHRD-209ENST00000461120 TEX261Q6UWH6 196 aa10.08□□□□□ -0.8
CHRD-209ENST00000461120 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
CHRD-209ENST00000461120 C5orf17Q8NAS9 161 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 288.2 ms