RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 IGHV3-49A0A0A0MS15 119 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 P01737 135 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 NEGR1Q7Z3B1 354 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 LINC00311Q8N616 119 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 PGLYRP4Q96LB8 373 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 TSSC4Q9Y5U2 329 aaPredicted RBP12.25□□□□□ -0.45
LMNB1-203ENST00000460265 SMIM27A0A1W2PRY6 76 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 CFAP161Q6P656 301 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 C11orf52Q96A22 123 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 Q9H3A6 140 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 CSN3P07498 182 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 SCGB1A1P11684 91 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 FABP2P12104 132 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 KIR3DS1Q14943 382 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 LINC00527Q9UJ94 153 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 NAV2Q8IVL1 2488 aa12.25□□□□□ -0.45
LMNB1-203ENST00000460265 CGB1A6NKQ9 187 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 J3QR89 54 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 EPDR1Q9UM22 224 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 F11RQ9Y624 299 aaKnown RBP12.24□□□□□ -0.45
LMNB1-203ENST00000460265 IGHV3-66A0A0C4DH42 116 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 H3BRM9 83 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 K7EQM0 130 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 GNLYP22749 145 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 ZNF48Q96MX3 618 aaPredicted RBP12.24□□□□□ -0.45
LMNB1-203ENST00000460265 CHEK1O14757 476 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 OR5A1Q8NGJ0 315 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 MS4A6AQ9H2W1 248 aa12.24□□□□□ -0.45
LMNB1-203ENST00000460265 HIGD1CA8MV81 97 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 VMO1Q7Z5L0 202 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 NUP35Q8NFH5 326 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 GAGE12HA6NDE8 117 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 IGLV1-47P01700 117 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 SMIM17P0DL12 118 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 FNDC10F2Z333 226 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 DLX6P56179 175 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 TMEM116Q8NCL8 245 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 SMPXQ9UHP9 88 aa12.23□□□□□ -0.45
LMNB1-203ENST00000460265 IGHV1-24A0A0C4DH33 117 aa12.22□□□□□ -0.45
LMNB1-203ENST00000460265 SERTM2A0A1B0GWG4 89 aa12.22□□□□□ -0.45
LMNB1-203ENST00000460265 GDF5OSQ5U4N7 250 aa12.22□□□□□ -0.45
LMNB1-203ENST00000460265 FAM167A-AS1Q96KT0 104 aa12.22□□□□□ -0.45
LMNB1-203ENST00000460265 ZNF138P52744 262 aa12.22□□□□□ -0.45
LMNB1-203ENST00000460265 FOXE3Q13461 319 aa12.22□□□□□ -0.45
LMNB1-203ENST00000460265 CT45A10P0DMU9 189 aa12.21□□□□□ -0.45
LMNB1-203ENST00000460265 KLF5Q13887 457 aaPredicted RBP12.21□□□□□ -0.45
LMNB1-203ENST00000460265 IGFL4Q6B9Z1 124 aa12.21□□□□□ -0.45
LMNB1-203ENST00000460265 ZNF329Q86UD4 541 aa12.21□□□□□ -0.45
LMNB1-203ENST00000460265 NEU4Q8WWR8 484 aaPredicted RBP12.21□□□□□ -0.45
LMNB1-203ENST00000460265 IGKV3-7A0A075B6H7 116 aa12.21□□□□□ -0.45
LMNB1-203ENST00000460265 M0R3E3 92 aa12.21□□□□□ -0.45
LMNB1-203ENST00000460265 COX8AP10176 69 aa12.21□□□□□ -0.45
LMNB1-203ENST00000460265 CSN1S1P47710 185 aa12.21□□□□□ -0.45
LMNB1-203ENST00000460265 CD300EQ496F6 205 aaPredicted RBP12.21□□□□□ -0.45
LMNB1-203ENST00000460265 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.45
LMNB1-203ENST00000460265 CIARTQ8N365 385 aaPredicted RBP12.21□□□□□ -0.45
LMNB1-203ENST00000460265 SLC25A39Q9BZJ4 359 aaPredicted RBP12.21□□□□□ -0.45
LMNB1-203ENST00000460265 AAMDCQ9H7C9 122 aa12.21□□□□□ -0.45
LMNB1-203ENST00000460265 ZNF785A8K8V0 405 aa12.21□□□□□ -0.46
LMNB1-203ENST00000460265 C8orf46Q8TAG6 207 aa12.21□□□□□ -0.46
LMNB1-203ENST00000460265 BPESC1Q9GZL8 116 aa12.21□□□□□ -0.46
LMNB1-203ENST00000460265 IGKV1D-37A0A075B6S9 117 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 RPL11P62913 178 aaKnown RBP12.2□□□□□ -0.46
LMNB1-203ENST00000460265 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 C17orf77Q96MU5 243 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 FXYD5Q96DB9 178 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 HSPB8Q9UJY1 196 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 ZNF462Q96JM2 2506 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 MFAP4P55083 255 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 GPR82Q96P67 336 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 RABAC1Q9UI14 185 aa12.2□□□□□ -0.46
LMNB1-203ENST00000460265 A0A1W2PPM0 123 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
LMNB1-203ENST00000460265 OR5AL1P0C617 328 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 TMEM219Q86XT9 240 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 TRGV9Q99603 122 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 PSMB11A5LHX3 300 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 SCGB2A1O75556 95 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 LY6EQ16553 131 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 C2orf91Q6ZV80 131 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 RNF125Q96EQ8 232 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 C5orf64Q2M2E5 130 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 RASL11AQ6T310 242 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
LMNB1-203ENST00000460265 GEMIN7Q9H840 131 aaKnown RBP12.19□□□□□ -0.46
LMNB1-203ENST00000460265 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
LMNB1-203ENST00000460265 PRTN3P24158 256 aa12.18□□□□□ -0.46
LMNB1-203ENST00000460265 C21orf62Q9NYP8 219 aa12.18□□□□□ -0.46
LMNB1-203ENST00000460265 A8MWL6 223 aa12.18□□□□□ -0.46
LMNB1-203ENST00000460265 ADAMTSL5Q6ZMM2 481 aa12.18□□□□□ -0.46
LMNB1-203ENST00000460265 URB1-AS1Q96HZ7 61 aa12.18□□□□□ -0.46
LMNB1-203ENST00000460265 A1L4Q6 167 aa12.17□□□□□ -0.46
LMNB1-203ENST00000460265 TNFRSF13BO14836 293 aaPredicted RBP12.17□□□□□ -0.46
LMNB1-203ENST00000460265 SAMD5Q5TGI4 173 aa12.17□□□□□ -0.46
LMNB1-203ENST00000460265 GRAMD2BQ96HH9 432 aa12.17□□□□□ -0.46
LMNB1-203ENST00000460265 J3KRW8 73 aa12.17□□□□□ -0.46
LMNB1-203ENST00000460265 BRD3OSQ6XYD6 125 aa12.17□□□□□ -0.46
LMNB1-203ENST00000460265 CHCHD1Q96BP2 118 aaKnown RBP12.17□□□□□ -0.46
LMNB1-203ENST00000460265 C1RLQ9NZP8 487 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 359.2 ms