RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 KIR2DL5BQ8NHK3 375 aa9.44□□□□□ -0.9
MECP2-206ENST00000460227 CLUHP3Q96NS8 147 aa9.44□□□□□ -0.9
MECP2-206ENST00000460227 CSTL1Q9H114 145 aa9.44□□□□□ -0.9
MECP2-206ENST00000460227 HLA-DRB4X5D2U9 266 aa9.44□□□□□ -0.9
MECP2-206ENST00000460227 CTXND1A0A1B0GTU2 59 aa9.43□□□□□ -0.9
MECP2-206ENST00000460227 ZNF705FA8MVS1 300 aaPredicted RBP9.43□□□□□ -0.9
MECP2-206ENST00000460227 F6UB75 175 aa9.43□□□□□ -0.9
MECP2-206ENST00000460227 CXorf1O96002 111 aa9.43□□□□□ -0.9
MECP2-206ENST00000460227 FHITP49789 147 aa9.43□□□□□ -0.9
MECP2-206ENST00000460227 EIF5AL1Q6IS14 154 aaKnown RBP9.43□□□□□ -0.9
MECP2-206ENST00000460227 EBLN2Q6P2I7 272 aa9.43□□□□□ -0.9
MECP2-206ENST00000460227 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
MECP2-206ENST00000460227 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
MECP2-206ENST00000460227 RPUSD4Q96CM3 377 aaKnown RBP9.43□□□□□ -0.9
MECP2-206ENST00000460227 PRELID1Q9Y255 219 aa9.43□□□□□ -0.9
MECP2-206ENST00000460227 A8MTW9 85 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 PRAC2D3DTV9 90 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 UBE2CO00762 179 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 GIG44P09565 113 aaPredicted RBP9.42□□□□□ -0.9
MECP2-206ENST00000460227 ARL14EPLP0DKL9 152 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 GCHFRP30047 84 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 APOC4P55056 127 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 RANP62826 216 aaKnown RBP9.42□□□□□ -0.9
MECP2-206ENST00000460227 UBE2L3P68036 154 aaKnown RBP9.42□□□□□ -0.9
MECP2-206ENST00000460227 DPPA3Q6W0C5 159 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 EXOC3-AS1Q8N2X6 119 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 ZNF738Q8NE65 137 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 MRPL53Q96EL3 112 aaKnown RBP9.42□□□□□ -0.9
MECP2-206ENST00000460227 PHYHIPLQ96FC7 376 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 TM2D3Q9BRN9 247 aa9.42□□□□□ -0.9
MECP2-206ENST00000460227 DUSP14O95147 198 aaKnown RBP9.41□□□□□ -0.9
MECP2-206ENST00000460227 ZNF705DP0CH99 300 aaPredicted RBP9.41□□□□□ -0.9
MECP2-206ENST00000460227 ZNF705BP0CI00 300 aaPredicted RBP9.41□□□□□ -0.9
MECP2-206ENST00000460227 RAB5CP51148 216 aa9.41□□□□□ -0.9
MECP2-206ENST00000460227 ICAM4Q14773 271 aa9.41□□□□□ -0.9
MECP2-206ENST00000460227 MORN3Q6PF18 240 aaPredicted RBP9.41□□□□□ -0.9
MECP2-206ENST00000460227 OR8A1Q8NGG7 326 aa9.41□□□□□ -0.9
MECP2-206ENST00000460227 PGPA6NDG6 321 aa9.4□□□□□ -0.9
MECP2-206ENST00000460227 M0R3E3 92 aa9.4□□□□□ -0.9
MECP2-206ENST00000460227 SULT1A2P50226 295 aa9.4□□□□□ -0.9
MECP2-206ENST00000460227 CNN1P51911 297 aaKnown RBP9.4□□□□□ -0.9
MECP2-206ENST00000460227 Q6ZWC4 215 aa9.4□□□□□ -0.9
MECP2-206ENST00000460227 Q9H3A6 140 aa9.4□□□□□ -0.9
MECP2-206ENST00000460227 TMPRSS5Q9H3S3 457 aa9.4□□□□□ -0.9
MECP2-206ENST00000460227 AAMDCQ9H7C9 122 aa9.4□□□□□ -0.9
MECP2-206ENST00000460227 TMEM167BQ9NRX6 74 aa9.4□□□□□ -0.9
MECP2-206ENST00000460227 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
MECP2-206ENST00000460227 FGF8P55075 233 aaPredicted RBP9.39□□□□□ -0.91
MECP2-206ENST00000460227 AMTNQ6UX39 209 aa9.39□□□□□ -0.91
MECP2-206ENST00000460227 ARL6IP6Q8N6S5 226 aa9.39□□□□□ -0.91
MECP2-206ENST00000460227 OR4B1Q8NGF8 309 aa9.39□□□□□ -0.91
MECP2-206ENST00000460227 FAM213BQ8TBF2 198 aa9.39□□□□□ -0.91
MECP2-206ENST00000460227 OTORQ9NRC9 128 aa9.39□□□□□ -0.91
MECP2-206ENST00000460227 MAP1LC3B2A6NCE7 125 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 H2AFB1P0C5Y9 115 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
MECP2-206ENST00000460227 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
MECP2-206ENST00000460227 CSNK1G2-AS1Q8NCQ2 148 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 SFT2D1Q8WV19 159 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 RNF183Q96D59 192 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 SPATA25Q9BR10 227 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 OVOL2Q9BRP0 275 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 MAP1LC3BQ9GZQ8 125 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 ZMAT4Q9H898 229 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 TP53TG1Q9Y2A0 90 aa9.38□□□□□ -0.91
MECP2-206ENST00000460227 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
MECP2-206ENST00000460227 CA1P00915 261 aaPredicted RBP9.37□□□□□ -0.91
MECP2-206ENST00000460227 HIST1H1AQ02539 215 aaPredicted RBP9.37□□□□□ -0.91
MECP2-206ENST00000460227 OR10J6PQ8NGY7 276 aa9.37□□□□□ -0.91
MECP2-206ENST00000460227 RXFP4Q8TDU9 374 aa9.37□□□□□ -0.91
MECP2-206ENST00000460227 LINC00477Q96M19 166 aa9.37□□□□□ -0.91
MECP2-206ENST00000460227 AGPAT4-IT1Q9H0P7 198 aa9.37□□□□□ -0.91
MECP2-206ENST00000460227 SLC35B3Q9H1N7 401 aa9.37□□□□□ -0.91
MECP2-206ENST00000460227 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 DIRC3C9JPN6 131 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 NPIPB6E9PJ23 425 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 SPRY2O43597 315 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 CT45A10P0DMU9 189 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 CSN1S1P47710 185 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 SUMO1P63165 101 aaKnown RBP9.36□□□□□ -0.91
MECP2-206ENST00000460227 ERCC8Q13216 396 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 FAM74A1Q5RGS3 127 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 C9orf47Q6ZRZ4 202 aa9.36□□□□□ -0.91
MECP2-206ENST00000460227 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
MECP2-206ENST00000460227 FXYD7P58549 80 aa9.35□□□□□ -0.91
MECP2-206ENST00000460227 CCL20P78556 96 aa9.35□□□□□ -0.91
MECP2-206ENST00000460227 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
MECP2-206ENST00000460227 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
MECP2-206ENST00000460227 VGLL1Q99990 258 aa9.35□□□□□ -0.91
MECP2-206ENST00000460227 C1QTNF4Q9BXJ3 329 aa9.35□□□□□ -0.91
MECP2-206ENST00000460227 NKX6-2Q9C056 277 aaPredicted RBP9.35□□□□□ -0.91
MECP2-206ENST00000460227 RETNQ9HD89 108 aa9.35□□□□□ -0.91
MECP2-206ENST00000460227 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
MECP2-206ENST00000460227 YTHDF2Q9Y5A9 579 aaKnown RBP9.35□□□□□ -0.91
MECP2-206ENST00000460227 TENM3Q9P273 2699 aa9.34□□□□□ -0.91
MECP2-206ENST00000460227 IGKV2-40A0A087WW87 121 aaPredicted RBP9.34□□□□□ -0.91
MECP2-206ENST00000460227 FAM74A7A6NL05 159 aa9.34□□□□□ -0.91
MECP2-206ENST00000460227 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
MECP2-206ENST00000460227 CRXO43186 299 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms