RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 DPH3P1Q9H4G8 78 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 ZNF815PA8K554 130 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 IGHV2-70P01814 119 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 MPV17L2Q567V2 206 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 GTSCR1Q86UQ5 136 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 SPRY4Q9C004 299 aa11.82□□□□□ -0.52
PTPRU-205ENST00000460170 ERCC8Q13216 396 aa11.81□□□□□ -0.52
PTPRU-205ENST00000460170 TRGV2A0A075B6R0 118 aa11.81□□□□□ -0.52
PTPRU-205ENST00000460170 TMEM262E9PQX1 116 aa11.81□□□□□ -0.52
PTPRU-205ENST00000460170 DKK4Q9UBT3 224 aa11.81□□□□□ -0.52
PTPRU-205ENST00000460170 UNQ6494/PRO21346Q6UXR6 183 aa11.81□□□□□ -0.52
PTPRU-205ENST00000460170 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
PTPRU-205ENST00000460170 SMIM27A0A1W2PRY6 76 aa11.81□□□□□ -0.52
PTPRU-205ENST00000460170 LHBP01229 141 aa11.81□□□□□ -0.52
PTPRU-205ENST00000460170 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
PTPRU-205ENST00000460170 LSM4Q9Y4Z0 139 aaKnown RBP11.81□□□□□ -0.52
PTPRU-205ENST00000460170 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
PTPRU-205ENST00000460170 SLAQ13239 276 aa11.8□□□□□ -0.52
PTPRU-205ENST00000460170 FXYD5Q96DB9 178 aa11.8□□□□□ -0.52
PTPRU-205ENST00000460170 MCRIP2Q9BUT9 160 aaKnown RBP11.8□□□□□ -0.52
PTPRU-205ENST00000460170 CD300EQ496F6 205 aaPredicted RBP11.8□□□□□ -0.52
PTPRU-205ENST00000460170 FCN3O75636 299 aa11.8□□□□□ -0.52
PTPRU-205ENST00000460170 TMEM158Q8WZ71 300 aa11.8□□□□□ -0.52
PTPRU-205ENST00000460170 A0A087X0K7 114 aa11.8□□□□□ -0.52
PTPRU-205ENST00000460170 EREGO14944 169 aa11.8□□□□□ -0.52
PTPRU-205ENST00000460170 YAE1D1Q9NRH1 226 aa11.8□□□□□ -0.52
PTPRU-205ENST00000460170 KIAA1549LQ6ZVL6 1849 aa11.8□□□□□ -0.52
PTPRU-205ENST00000460170 C14orf178Q8N769 122 aaPredicted RBP11.79□□□□□ -0.52
PTPRU-205ENST00000460170 TECTAO75443 2155 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 TMEM213A2RRL7 107 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 SPRNQ5BIV9 151 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 Q6ZWC4 215 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 C8orf31Q8N9H6 132 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 OR5A1Q8NGJ0 315 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 PCDH15Q96QU1 1955 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 MRPS16Q9Y3D3 137 aaKnown RBP11.79□□□□□ -0.52
PTPRU-205ENST00000460170 TRAV12-3A0A0B4J271 114 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 TMEM8BA6NDV4 472 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 CTSZQ9UBR2 303 aa11.79□□□□□ -0.52
PTPRU-205ENST00000460170 H3BRN7 92 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 TDGF1P3P51864 188 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 SFTA2Q6UW10 78 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 C8orf49Q96NF6 230 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 A0A1W2PNU3 283 aaPredicted RBP11.78□□□□□ -0.52
PTPRU-205ENST00000460170 OVOL3O00110 214 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 HOXA3O43365 443 aaPredicted RBP11.78□□□□□ -0.52
PTPRU-205ENST00000460170 CD28P10747 220 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 DAZ1Q9NQZ3 744 aaKnown RBP11.78□□□□□ -0.52
PTPRU-205ENST00000460170 G3V318 75 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 BCL6BQ8N143 479 aaPredicted RBP11.78□□□□□ -0.52
PTPRU-205ENST00000460170 DNAL4O96015 105 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 FAM104BQ5XKR9 115 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 ZNF479Q96JC4 524 aa11.78□□□□□ -0.52
PTPRU-205ENST00000460170 PRSS46E5RG02 174 aa11.77□□□□□ -0.52
PTPRU-205ENST00000460170 K7EM74 188 aa11.77□□□□□ -0.52
PTPRU-205ENST00000460170 ZC2HC1BQ5TFG8 222 aa11.77□□□□□ -0.52
PTPRU-205ENST00000460170 RNF182Q8N6D2 247 aa11.77□□□□□ -0.52
PTPRU-205ENST00000460170 OR13C6PQ8NH95 151 aa11.77□□□□□ -0.52
PTPRU-205ENST00000460170 MUC6Q6W4X9 2439 aa11.77□□□□□ -0.52
PTPRU-205ENST00000460170 IGHV2-70DA0A0C4DH43 119 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 K7EN84 100 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 RUSC1-AS1Q66K80 236 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 IGLC7A0M8Q6 106 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 TNFRSF6BO95407 300 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 C11orf44Q8N8P7 122 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 TOMM7Q9P0U1 55 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 NDUFS8O00217 210 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 PLNP26678 52 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 SAMD5Q5TGI4 173 aa11.77□□□□□ -0.53
PTPRU-205ENST00000460170 VCYO14598 125 aa11.76□□□□□ -0.53
PTPRU-205ENST00000460170 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
PTPRU-205ENST00000460170 PRR25Q96S07 402 aa11.76□□□□□ -0.53
PTPRU-205ENST00000460170 ALPK3Q96L96 1907 aa11.76□□□□□ -0.53
PTPRU-205ENST00000460170 SHISA9B4DS77 424 aa11.76□□□□□ -0.53
PTPRU-205ENST00000460170 PYGO2Q9BRQ0 406 aa11.76□□□□□ -0.53
PTPRU-205ENST00000460170 MEGF9Q9H1U4 602 aa11.76□□□□□ -0.53
PTPRU-205ENST00000460170 ZNF876PQ49A33 203 aa11.75□□□□□ -0.53
PTPRU-205ENST00000460170 SNHG12Q9BXW3 62 aa11.75□□□□□ -0.53
PTPRU-205ENST00000460170 SLC25A16P16260 332 aa11.75□□□□□ -0.53
PTPRU-205ENST00000460170 LURAP1LQ8IV03 231 aa11.75□□□□□ -0.53
PTPRU-205ENST00000460170 CSTL1Q9H114 145 aa11.75□□□□□ -0.53
PTPRU-205ENST00000460170 IGHV1-69DA0A0B4J2H0 117 aa11.75□□□□□ -0.53
PTPRU-205ENST00000460170 IGHV1-69P01742 117 aa11.75□□□□□ -0.53
PTPRU-205ENST00000460170 IL17RELQ6ZVW7 336 aa11.75□□□□□ -0.53
PTPRU-205ENST00000460170 NAA38Q9BRA0 125 aaKnown RBP11.75□□□□□ -0.53
PTPRU-205ENST00000460170 TRAV2A0A0B4J234 112 aa11.74□□□□□ -0.53
PTPRU-205ENST00000460170 IGKV3D-20A0A0C4DH25 116 aa11.74□□□□□ -0.53
PTPRU-205ENST00000460170 C22orf46C9J442 243 aa11.74□□□□□ -0.53
PTPRU-205ENST00000460170 MSMBP08118 114 aa11.74□□□□□ -0.53
PTPRU-205ENST00000460170 IGF2-ASQ6U949 168 aa11.74□□□□□ -0.53
PTPRU-205ENST00000460170 NBL1P41271 181 aa11.74□□□□□ -0.53
PTPRU-205ENST00000460170 RCHY1Q96PM5 261 aa11.74□□□□□ -0.53
PTPRU-205ENST00000460170 ZNF491Q8N8L2 437 aa11.74□□□□□ -0.53
PTPRU-205ENST00000460170 KLF2Q9Y5W3 355 aaPredicted RBP11.74□□□□□ -0.53
PTPRU-205ENST00000460170 IGLC2P0DOY2 106 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 PCNX3Q9H6A9 2034 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 TMEM131Q92545 1883 aa11.73□□□□□ -0.53
PTPRU-205ENST00000460170 IGLV2-14P01704 120 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms