RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 LOC102723971A0A1B0GUV8 181 aa8□□□□□ -1.13
USP39-210ENST00000459775 TMEM189A5PLL7 270 aa8□□□□□ -1.13
USP39-210ENST00000459775 HMGB3O15347 200 aaKnown RBP8□□□□□ -1.13
USP39-210ENST00000459775 GATA2P23769 480 aaPredicted RBP8□□□□□ -1.13
USP39-210ENST00000459775 RND2P52198 227 aa8□□□□□ -1.13
USP39-210ENST00000459775 CFHR3Q02985 330 aa8□□□□□ -1.13
USP39-210ENST00000459775 ALKAL2Q6UX46 152 aa8□□□□□ -1.13
USP39-210ENST00000459775 TREML4Q6UXN2 200 aa8□□□□□ -1.13
USP39-210ENST00000459775 C12orf54Q6X4T0 127 aa8□□□□□ -1.13
USP39-210ENST00000459775 GBGT1Q8N5D6 347 aa8□□□□□ -1.13
USP39-210ENST00000459775 ATP5SQ99766 215 aa8□□□□□ -1.13
USP39-210ENST00000459775 MAP1LC3AQ9H492 121 aa8□□□□□ -1.13
USP39-210ENST00000459775 UQCC1Q9NVA1 299 aa8□□□□□ -1.13
USP39-210ENST00000459775 LAMTOR2Q9Y2Q5 125 aa8□□□□□ -1.13
USP39-210ENST00000459775 IGHV3-35A0A0C4DH35 117 aa8□□□□□ -1.13
USP39-210ENST00000459775 IGHV3-11P01762 117 aa8□□□□□ -1.13
USP39-210ENST00000459775 PSG1P11464 419 aa8□□□□□ -1.13
USP39-210ENST00000459775 HBG1P69891 147 aa8□□□□□ -1.13
USP39-210ENST00000459775 HBG2P69892 147 aa8□□□□□ -1.13
USP39-210ENST00000459775 AKR1C1Q04828 323 aa8□□□□□ -1.13
USP39-210ENST00000459775 C15orf32Q32M92 178 aa8□□□□□ -1.13
USP39-210ENST00000459775 PVRIGQ6DKI7 326 aa8□□□□□ -1.13
USP39-210ENST00000459775 FER1L6-AS1Q8NA97 138 aa8□□□□□ -1.13
USP39-210ENST00000459775 RNF141Q8WVD5 230 aa8□□□□□ -1.13
USP39-210ENST00000459775 TRGV3P03979 118 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 CRIP2P52943 208 aaPredicted RBP7.99□□□□□ -1.13
USP39-210ENST00000459775 CD300EQ496F6 205 aaPredicted RBP7.99□□□□□ -1.13
USP39-210ENST00000459775 OR10J3Q5JRS4 329 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 Q8N2B8 174 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 TMED6Q8WW62 240 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 RNF183Q96D59 192 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 TMEM147Q9BVK8 224 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 GTSF1LQ9H1H1 148 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 PRO0628Q9UI54 55 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 TRBV9A0A0B4J1U6 114 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 F8W735 103 aaPredicted RBP7.99□□□□□ -1.13
USP39-210ENST00000459775 IGLV1-40P01703 118 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 TRBV12-3P01733 135 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 ATP6V0CP27449 155 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 NDUFA6P56556 154 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 TPPP2P59282 170 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 ZNF90Q03938 601 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 C18orf65Q6ZTR6 163 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 OR4X1Q8NH49 305 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 LINC01006Q8NI28 216 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 MGST2Q99735 147 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 SPATA25Q9BR10 227 aa7.99□□□□□ -1.13
USP39-210ENST00000459775 TENM1Q9UKZ4 2725 aa7.98□□□□□ -1.13
USP39-210ENST00000459775 IGHV3OR16-8A0A075B7F1 116 aa7.98□□□□□ -1.13
USP39-210ENST00000459775 GAGE12BA1L429 117 aa7.98□□□□□ -1.13
USP39-210ENST00000459775 NUDT3O95989 172 aa7.98□□□□□ -1.13
USP39-210ENST00000459775 CRYGDP07320 174 aa7.98□□□□□ -1.13
USP39-210ENST00000459775 MDKP21741 143 aaPredicted RBP7.98□□□□□ -1.13
USP39-210ENST00000459775 TFPI2P48307 235 aa7.98□□□□□ -1.13
USP39-210ENST00000459775 WDR61Q9GZS3 305 aaKnown RBP7.98□□□□□ -1.13
USP39-210ENST00000459775 VSIRQ9H7M9 311 aa7.98□□□□□ -1.13
USP39-210ENST00000459775 NAT8BQ9UHF3 227 aa7.98□□□□□ -1.13
USP39-210ENST00000459775 IGKV1D-37A0A075B6S9 117 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 OR2T8A6NH00 312 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 TAAR5O14804 337 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 SOHLH1Q5JUK2 328 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 MIC13Q5XKP0 118 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 ZFAND6Q6FIF0 208 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 SPANXCQ9NY87 97 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 SLC45A2Q9UMX9 530 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 WDR83OSQ9Y284 106 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 BORCS7-ASMTA0A0B4J1R7 106 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 PSMB8P28062 276 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 OR10J1P30954 320 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 HIST1H1AQ02539 215 aaPredicted RBP7.97□□□□□ -1.13
USP39-210ENST00000459775 CLEC19AQ6UXS0 136 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 KLHDC1Q8N7A1 406 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 OR4F5Q8NH21 305 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 GRAMD2BQ96HH9 432 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 NPCDR1Q9BY65 106 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 NPVFQ9HCQ7 196 aa7.97□□□□□ -1.13
USP39-210ENST00000459775 LSM4Q9Y4Z0 139 aaKnown RBP7.97□□□□□ -1.13
USP39-210ENST00000459775 AGPAT2O15120 278 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 JTBO76095 146 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 GPR183P32249 361 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 ZNF266Q14584 549 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 TAL2Q16559 108 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 TIGITQ495A1 244 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 Q56UQ5 140 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 NEGR1Q7Z3B1 354 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 OR5AU1Q8NGC0 362 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 ZNRF2Q8NHG8 242 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 SCGB1C1Q8TD33 95 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 HIST1H2BLQ99880 126 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 C21orf62Q9NYP8 219 aa7.96□□□□□ -1.13
USP39-210ENST00000459775 PRSS29PA6NIE9 313 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 ZFP92A6NM28 416 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 IGKV1-17P01599 117 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 TPT1P13693 172 aaKnown RBP7.96□□□□□ -1.14
USP39-210ENST00000459775 FABP4P15090 132 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 ADMP35318 185 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 HSD52Q0P140 79 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 ZNF343Q6P1L6 599 aa7.96□□□□□ -1.14
USP39-210ENST00000459775 TEPPQ6URK8 271 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms