RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 HBE1P02100 147 aa11.69□□□□□ -0.54
CD28-203ENST00000458610 SERF2P84101 59 aa11.69□□□□□ -0.54
CD28-203ENST00000458610 PMS2P11Q13670 270 aa11.69□□□□□ -0.54
CD28-203ENST00000458610 HSD17B11Q8NBQ5 300 aa11.69□□□□□ -0.54
CD28-203ENST00000458610 GNPNAT1Q96EK6 184 aaPredicted RBP11.69□□□□□ -0.54
CD28-203ENST00000458610 RFNGQ9Y644 331 aa11.69□□□□□ -0.54
CD28-203ENST00000458610 TAAR5O14804 337 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 RBMY1A1P0DJD3 496 aaKnown RBP11.68□□□□□ -0.54
CD28-203ENST00000458610 RBMY1CP0DJD4 496 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 CDKN1BP46527 198 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 RBMY1FQ15415 496 aaKnown RBP11.68□□□□□ -0.54
CD28-203ENST00000458610 SPINK13Q1W4C9 94 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 CEMP1Q6PRD7 247 aaPredicted RBP11.68□□□□□ -0.54
CD28-203ENST00000458610 Q6ZNX1 250 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 LYPD1Q8N2G4 141 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 OR10G4Q8NGN3 311 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 OR10G9Q8NGN4 311 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 OR10G7Q8NGN6 311 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 OR2G3Q8NGZ4 309 aa11.68□□□□□ -0.54
CD28-203ENST00000458610 TEX48A0A1B0GUV7 120 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 M0R2Z0 102 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 NDUFB4O95168 129 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 OR10J4P0C629 311 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 RRN3P1Q2M238 152 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 PQLC2Q6ZP29 291 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 C1orf158Q8N1D5 194 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 TMEM256Q8N2U0 113 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 FXYD5Q96DB9 178 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 LINC00477Q96M19 166 aa11.67□□□□□ -0.54
CD28-203ENST00000458610 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
CD28-203ENST00000458610 C11orf94C9JXX5 98 aa11.66□□□□□ -0.54
CD28-203ENST00000458610 JTBO76095 146 aa11.66□□□□□ -0.54
CD28-203ENST00000458610 ATP6V0CP27449 155 aa11.66□□□□□ -0.54
CD28-203ENST00000458610 LEPP41159 167 aa11.66□□□□□ -0.54
CD28-203ENST00000458610 CSN1S1P47710 185 aa11.66□□□□□ -0.54
CD28-203ENST00000458610 UBE2L3P68036 154 aaKnown RBP11.66□□□□□ -0.54
CD28-203ENST00000458610 ICAM4Q14773 271 aa11.66□□□□□ -0.54
CD28-203ENST00000458610 PHLDA1Q8WV24 401 aaPredicted RBP11.66□□□□□ -0.54
CD28-203ENST00000458610 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
CD28-203ENST00000458610 C20orf144Q9BQM9 153 aa11.66□□□□□ -0.54
CD28-203ENST00000458610 NPIPB6E9PJ23 425 aa11.65□□□□□ -0.54
CD28-203ENST00000458610 ARPC5O15511 151 aa11.65□□□□□ -0.54
CD28-203ENST00000458610 SPART-AS1P0CW21 52 aa11.65□□□□□ -0.54
CD28-203ENST00000458610 NANOS2P60321 138 aaKnown RBP11.65□□□□□ -0.54
CD28-203ENST00000458610 FAM74A1Q5RGS3 127 aa11.65□□□□□ -0.54
CD28-203ENST00000458610 FAM122CQ6P4D5 195 aa11.65□□□□□ -0.54
CD28-203ENST00000458610 RXFP4Q8TDU9 374 aa11.65□□□□□ -0.54
CD28-203ENST00000458610 PRAC2D3DTV9 90 aa11.64□□□□□ -0.55
CD28-203ENST00000458610 M0R3E3 92 aa11.64□□□□□ -0.55
CD28-203ENST00000458610 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
CD28-203ENST00000458610 CDC34P49427 236 aaPredicted RBP11.64□□□□□ -0.55
CD28-203ENST00000458610 RAB2AP61019 212 aa11.64□□□□□ -0.55
CD28-203ENST00000458610 RANP62826 216 aaKnown RBP11.64□□□□□ -0.55
CD28-203ENST00000458610 EXOC3-AS1Q8N2X6 119 aa11.64□□□□□ -0.55
CD28-203ENST00000458610 RPP25LQ8N5L8 163 aaKnown RBP11.64□□□□□ -0.55
CD28-203ENST00000458610 LINC01587Q99440 93 aa11.64□□□□□ -0.55
CD28-203ENST00000458610 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
CD28-203ENST00000458610 LOC102723971A0A1B0GUV8 181 aa11.63□□□□□ -0.55
CD28-203ENST00000458610 TMEM78Q5T7P6 136 aa11.63□□□□□ -0.55
CD28-203ENST00000458610 RPL7L1Q6DKI1 246 aaKnown RBP11.63□□□□□ -0.55
CD28-203ENST00000458610 BAP18Q8IXM2 172 aa11.63□□□□□ -0.55
CD28-203ENST00000458610 ACTR3CQ9C0K3 210 aaPredicted RBP11.63□□□□□ -0.55
CD28-203ENST00000458610 HMSDA8MTL9 139 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 G3V3Q6 166 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 H7BYZ3 331 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 CT45A10P0DMU9 189 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 EMP1P54849 157 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 TAS2R60P59551 318 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 ZNF345Q14585 488 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 C9orf47Q6ZRZ4 202 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 CMTM2Q8TAZ6 248 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 ZNF503Q96F45 646 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 Q9H3A6 140 aa11.62□□□□□ -0.55
CD28-203ENST00000458610 TRAV10A0A0B4J240 114 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 A0A0D9SG52 128 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 LCE6AA0A183 80 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 SLC25A5P05141 298 aaKnown RBP11.61□□□□□ -0.55
CD28-203ENST00000458610 NMBP08949 121 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 TCTAP57738 103 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 CCDC28AQ8IWP9 274 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 ARL6IP6Q8N6S5 226 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 PHYHIPLQ96FC7 376 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 ARPC5LQ9BPX5 153 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 AGPAT4-IT1Q9H0P7 198 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 OTORQ9NRC9 128 aa11.61□□□□□ -0.55
CD28-203ENST00000458610 RBAKDNA6NC62 111 aa11.6□□□□□ -0.55
CD28-203ENST00000458610 SMLR1H3BR10 107 aa11.6□□□□□ -0.55
CD28-203ENST00000458610 STAG3L2P0CL84 134 aa11.6□□□□□ -0.55
CD28-203ENST00000458610 STAG3L3P0CL85 134 aa11.6□□□□□ -0.55
CD28-203ENST00000458610 PRB4P10163 310 aaPredicted RBP11.6□□□□□ -0.55
CD28-203ENST00000458610 ZNF493Q6ZR52 646 aa11.6□□□□□ -0.55
CD28-203ENST00000458610 KCNRGQ8N5I3 272 aa11.6□□□□□ -0.55
CD28-203ENST00000458610 RAB24Q969Q5 203 aa11.6□□□□□ -0.55
CD28-203ENST00000458610 NIPSNAP3BQ9BS92 247 aa11.6□□□□□ -0.55
CD28-203ENST00000458610 SH3BGRL3Q9H299 93 aa11.6□□□□□ -0.55
CD28-203ENST00000458610 TRBV7-9A0A0J9YWB2 115 aa11.59□□□□□ -0.55
CD28-203ENST00000458610 ZNF705GA8MUZ8 300 aaPredicted RBP11.59□□□□□ -0.55
CD28-203ENST00000458610 CXorf1O96002 111 aa11.59□□□□□ -0.55
CD28-203ENST00000458610 EIF5AP63241 154 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms