RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 MOSP00540 346 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 KLF5Q13887 457 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-207ENST00000458046 C8orf86Q6ZUL3 223 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 LINC00305Q7Z4B0 112 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 ZNF329Q86UD4 541 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 ZNF586Q9NXT0 402 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 U3KQE9 123 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 A0A087WX48 190 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 TCRBV4S1A1TA0A5B7 111 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 IZUMO1RA6ND01 250 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 TMEM178BH3BS89 294 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 CCL25O15444 150 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 NDUFB3O43676 98 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 IGLV2-23P01705 113 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 NTF3P20783 257 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 MFAP2P55001 183 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 C20orf144Q9BQM9 153 aa9.34□□□□□ -0.91
SYNE2-207ENST00000458046 CORTO00230 105 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 PEX7O00628 323 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 KLHDC1Q8N7A1 406 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 MRAP2Q96G30 205 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 KCNS1Q96KK3 526 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 ABCA1O95477 2261 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 A0A1W2PPI3 338 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 HLA-DQA1P01909 254 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 GPR6P46095 362 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-207ENST00000458046 SUB1P53999 127 aaKnown RBP eCLIP9.33□□□□□ -0.92
SYNE2-207ENST00000458046 PDPNQ86YL7 162 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 Q8N976 141 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 VSTM2AQ8TAG5 236 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 FXYD5Q96DB9 178 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 CTSZQ9UBR2 303 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 WASHC3Q9Y3C0 194 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
SYNE2-207ENST00000458046 LRRC10Q5BKY1 277 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 GDF5OSQ5U4N7 250 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 KIR3DL3Q8N743 410 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 TSKUQ8WUA8 353 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 RASL10AQ92737 203 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 MDFIQ99750 246 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 SPTAN1Q13813 2472 aaKnown RBP9.32□□□□□ -0.92
SYNE2-207ENST00000458046 K7ERU9 68 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 EIF4EBP3O60516 100 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-207ENST00000458046 ZNF324O75467 553 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-207ENST00000458046 FSTL3O95633 263 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 C20orf173Q96LM9 149 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 ACACAQ13085 2346 aa9.32□□□□□ -0.92
SYNE2-207ENST00000458046 PGPA6NDG6 321 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 SLC25A5P05141 298 aaKnown RBP9.31□□□□□ -0.92
SYNE2-207ENST00000458046 ELANEP08246 267 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 CNTFRP26992 372 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 C9orf139Q6ZV77 190 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
SYNE2-207ENST00000458046 LINC00477Q96M19 166 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 TNFRSF19Q9NS68 423 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 PRO0628Q9UI54 55 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 ZGRF1Q86YA3 2104 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 PRRG2O14669 202 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 IGHG4P01861 327 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 LOXP28300 417 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-207ENST00000458046 HILS1P60008 231 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 VMA21Q3ZAQ7 101 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 TMEM78Q5T7P6 136 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 ATOH7Q8N100 152 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 ZFP30Q9Y2G7 519 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 RELNP78509 3460 aa9.31□□□□□ -0.92
SYNE2-207ENST00000458046 INS-IGF2F8WCM5 200 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 UBE2G1P62253 170 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 MRGPRG-AS1Q2M3A8 158 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 SPATA45Q537H7 98 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 SPACA3Q8IXA5 215 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 OR4A5Q8NH83 315 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 C18orf32Q8TCD1 76 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 MBD6Q96DN6 1003 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 PRR25Q96S07 402 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 CSMD1Q96PZ7 3565 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 GATA1P15976 413 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-207ENST00000458046 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 TMEM86BQ8N661 226 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 EPDR1Q9UM22 224 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 PLA2G2DQ9UNK4 145 aa9.3□□□□□ -0.92
SYNE2-207ENST00000458046 VWC2LB2RUY7 222 aa9.29□□□□□ -0.92
SYNE2-207ENST00000458046 RPS20P60866 119 aaKnown RBP9.29□□□□□ -0.92
SYNE2-207ENST00000458046 LCN12Q6JVE5 192 aa9.29□□□□□ -0.92
SYNE2-207ENST00000458046 DYNLRB1Q9NP97 96 aa9.29□□□□□ -0.92
SYNE2-207ENST00000458046 POLEQ07864 2286 aa9.29□□□□□ -0.92
SYNE2-207ENST00000458046 IGHV1-8P0DP01 117 aa9.29□□□□□ -0.92
SYNE2-207ENST00000458046 CD24P25063 80 aa9.29□□□□□ -0.92
SYNE2-207ENST00000458046 RNASE6Q93091 150 aaKnown RBP9.29□□□□□ -0.92
SYNE2-207ENST00000458046 BORCS7Q96B45 105 aa9.29□□□□□ -0.92
SYNE2-207ENST00000458046 TP53TG1Q9Y2A0 90 aa9.29□□□□□ -0.92
SYNE2-207ENST00000458046 LRBAP50851 2863 aa9.29□□□□□ -0.92
SYNE2-207ENST00000458046 IGLC7A0M8Q6 106 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 OR4C46A6NHA9 309 aa9.28□□□□□ -0.92
SYNE2-207ENST00000458046 PRB4P10163 310 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-207ENST00000458046 TFPI2P48307 235 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms