RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 AZU1P20160 251 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 TSPOP30536 169 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 TAS2R60P59551 318 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 OPCMLQ14982 345 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 LGALS9BQ3B8N2 356 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 OR10J6PQ8NGY7 276 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 C16orf74Q96GX8 76 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 C11orf1Q9H5F2 150 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 ZNF331Q9NQX6 463 aaPredicted RBP11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 UQCC1Q9NVA1 299 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 ALG5Q9Y673 324 aa11.13□□□□□ -0.63
CHCHD3-204ENST00000457942 IGSF23A1L1A6 192 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 BAXQ07812 192 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 IL15RAQ13261 267 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 FCN2Q15485 313 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 RNF212Q495C1 297 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 SOHLH1Q5JUK2 328 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 MIC13Q5XKP0 118 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 MAPKAPK5-AS1Q8N8E1 139 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 OR1L4Q8NGR5 311 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 TMEM37Q8WXS4 190 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 PXMP4Q9Y6I8 212 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 NACAE9PAV3 2078 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 HERC1Q15751 4861 aa11.12□□□□□ -0.63
CHCHD3-204ENST00000457942 SLC17A3O00476 420 aa11.11□□□□□ -0.63
CHCHD3-204ENST00000457942 NUDT3O95989 172 aa11.11□□□□□ -0.63
CHCHD3-204ENST00000457942 ATP5G1P05496 136 aa11.11□□□□□ -0.63
CHCHD3-204ENST00000457942 ATP5G3P48201 142 aa11.11□□□□□ -0.63
CHCHD3-204ENST00000457942 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
CHCHD3-204ENST00000457942 STX12Q86Y82 276 aa11.11□□□□□ -0.63
CHCHD3-204ENST00000457942 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
CHCHD3-204ENST00000457942 DNAJC4Q9NNZ3 241 aa11.11□□□□□ -0.63
CHCHD3-204ENST00000457942 OR5AC2Q9NZP5 309 aa11.11□□□□□ -0.63
CHCHD3-204ENST00000457942 H7BYZ3 331 aa11.1□□□□□ -0.63
CHCHD3-204ENST00000457942 J3KRW8 73 aa11.1□□□□□ -0.63
CHCHD3-204ENST00000457942 PTTG1O95997 202 aa11.1□□□□□ -0.63
CHCHD3-204ENST00000457942 H2BFSP57053 126 aa11.1□□□□□ -0.63
CHCHD3-204ENST00000457942 HBG1P69891 147 aa11.1□□□□□ -0.63
CHCHD3-204ENST00000457942 HBG2P69892 147 aa11.1□□□□□ -0.63
CHCHD3-204ENST00000457942 PFDN5Q99471 154 aa11.1□□□□□ -0.63
CHCHD3-204ENST00000457942 TIMM8BQ9Y5J9 83 aaPredicted RBP11.1□□□□□ -0.63
CHCHD3-204ENST00000457942 TRAV5A0A0B4J249 113 aa11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 SULT1A1P50225 295 aa11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 CCDC28AQ8IWP9 274 aa11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 TMEM252Q8N6L7 170 aa11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 NOP10Q9NPE3 64 aaKnown RBP11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 LYRM2Q9NU23 88 aaPredicted RBP11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 WDR83OSQ9Y284 106 aa11.09□□□□□ -0.63
CHCHD3-204ENST00000457942 CBY3A6NI87 242 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 H0YIZ8 118 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 H3BQ15 152 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 FGF7P21781 194 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 S100A11P31949 105 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 ZNF493Q6ZR52 646 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 C20orf144Q9BQM9 153 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 NMES1Q9C002 83 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 SLC39A9Q9NUM3 307 aa11.08□□□□□ -0.64
CHCHD3-204ENST00000457942 LEPP41159 167 aa11.07□□□□□ -0.64
CHCHD3-204ENST00000457942 KIR3DS1Q14943 382 aa11.07□□□□□ -0.64
CHCHD3-204ENST00000457942 GUK1Q16774 197 aa11.07□□□□□ -0.64
CHCHD3-204ENST00000457942 Q6ZR54 194 aa11.07□□□□□ -0.64
CHCHD3-204ENST00000457942 PPP1R1CQ8WVI7 109 aa11.07□□□□□ -0.64
CHCHD3-204ENST00000457942 C16orf90A8MZG2 172 aa11.06□□□□□ -0.64
CHCHD3-204ENST00000457942 SNURFLB1AK76 121 aa11.06□□□□□ -0.64
CHCHD3-204ENST00000457942 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
CHCHD3-204ENST00000457942 FAM3BP58499 235 aaPredicted RBP11.06□□□□□ -0.64
CHCHD3-204ENST00000457942 CLINT1Q14677 625 aa11.06□□□□□ -0.64
CHCHD3-204ENST00000457942 VWC2Q2TAL6 325 aa11.06□□□□□ -0.64
CHCHD3-204ENST00000457942 C1orf134Q5TEV5 83 aa11.06□□□□□ -0.64
CHCHD3-204ENST00000457942 RNASE8Q8TDE3 154 aaKnown RBP11.06□□□□□ -0.64
CHCHD3-204ENST00000457942 LRP1BQ9NZR2 4599 aa11.06□□□□□ -0.64
CHCHD3-204ENST00000457942 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
CHCHD3-204ENST00000457942 RLN2P04090 185 aa11.05□□□□□ -0.64
CHCHD3-204ENST00000457942 CCL18P55774 89 aa11.05□□□□□ -0.64
CHCHD3-204ENST00000457942 NHLH2Q02577 135 aa11.05□□□□□ -0.64
CHCHD3-204ENST00000457942 OR5I1Q13606 314 aa11.05□□□□□ -0.64
CHCHD3-204ENST00000457942 ATP6V1FQ16864 119 aa11.05□□□□□ -0.64
CHCHD3-204ENST00000457942 SAT2Q96F10 170 aaPredicted RBP11.05□□□□□ -0.64
CHCHD3-204ENST00000457942 ZNF586Q9NXT0 402 aa11.05□□□□□ -0.64
CHCHD3-204ENST00000457942 TIMM9Q9Y5J7 89 aa11.05□□□□□ -0.64
CHCHD3-204ENST00000457942 E5RGE8 158 aa11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 NPIPB6E9PJ23 425 aa11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 CT45A10P0DMU9 189 aa11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 CYCSP99999 105 aaKnown RBP11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 RGS21Q2M5E4 152 aa11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 BLNKQ8WV28 456 aa11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 RNF141Q8WVD5 230 aa11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 MED28Q9H204 178 aa11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 MBD2Q9UBB5 411 aa11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
CHCHD3-204ENST00000457942 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
CHCHD3-204ENST00000457942 ZNF253O75346 499 aa11.03□□□□□ -0.64
CHCHD3-204ENST00000457942 GAGE7O76087 117 aa11.03□□□□□ -0.64
CHCHD3-204ENST00000457942 MPC2O95563 127 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms