RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 CD300CQ08708 224 aa13.32□□□□□ -0.28
TRIM13-206ENST00000457662 LYPD1Q8N2G4 141 aa13.32□□□□□ -0.28
TRIM13-206ENST00000457662 MRPL53Q96EL3 112 aaKnown RBP13.32□□□□□ -0.28
TRIM13-206ENST00000457662 C1QTNF4Q9BXJ3 329 aa13.32□□□□□ -0.28
TRIM13-206ENST00000457662 DNAH9Q9NYC9 4486 aa13.32□□□□□ -0.28
TRIM13-206ENST00000457662 A8MTW9 85 aa13.31□□□□□ -0.28
TRIM13-206ENST00000457662 ZNF705FA8MVS1 300 aaPredicted RBP13.31□□□□□ -0.28
TRIM13-206ENST00000457662 HMGB3O15347 200 aaKnown RBP13.31□□□□□ -0.28
TRIM13-206ENST00000457662 EIF3GO75821 320 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRIM13-206ENST00000457662 GIG44P09565 113 aaPredicted RBP13.31□□□□□ -0.28
TRIM13-206ENST00000457662 TPT1P13693 172 aaKnown RBP13.31□□□□□ -0.28
TRIM13-206ENST00000457662 CNN1P51911 297 aaKnown RBP13.31□□□□□ -0.28
TRIM13-206ENST00000457662 ZFP69Q49AA0 526 aa13.31□□□□□ -0.28
TRIM13-206ENST00000457662 BAP18Q8IXM2 172 aa13.31□□□□□ -0.28
TRIM13-206ENST00000457662 C4BPBP20851 252 aa13.3□□□□□ -0.28
TRIM13-206ENST00000457662 CTXND1A0A1B0GTU2 59 aa13.29□□□□□ -0.28
TRIM13-206ENST00000457662 ZNF705DP0CH99 300 aaPredicted RBP13.29□□□□□ -0.28
TRIM13-206ENST00000457662 ZNF705BP0CI00 300 aaPredicted RBP13.29□□□□□ -0.28
TRIM13-206ENST00000457662 ARL14EPLP0DKL9 152 aa13.29□□□□□ -0.28
TRIM13-206ENST00000457662 RANP62826 216 aaKnown RBP13.29□□□□□ -0.28
TRIM13-206ENST00000457662 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
TRIM13-206ENST00000457662 ICAM4Q14773 271 aa13.29□□□□□ -0.28
TRIM13-206ENST00000457662 EXOC3-AS1Q8N2X6 119 aa13.29□□□□□ -0.28
TRIM13-206ENST00000457662 OR10J6PQ8NGY7 276 aa13.29□□□□□ -0.28
TRIM13-206ENST00000457662 STOML3Q8TAV4 291 aa13.29□□□□□ -0.28
TRIM13-206ENST00000457662 PHYHIPLQ96FC7 376 aa13.29□□□□□ -0.28
TRIM13-206ENST00000457662 UMAD1C9J7I0 102 aa13.29□□□□□ -0.28
TRIM13-206ENST00000457662 CXorf1O96002 111 aa13.29□□□□□ -0.28
TRIM13-206ENST00000457662 PRAC2D3DTV9 90 aa13.28□□□□□ -0.28
TRIM13-206ENST00000457662 M0R3E3 92 aa13.28□□□□□ -0.28
TRIM13-206ENST00000457662 EIF5AL1Q6IS14 154 aaKnown RBP13.28□□□□□ -0.28
TRIM13-206ENST00000457662 AMTNQ6UX39 209 aa13.28□□□□□ -0.28
TRIM13-206ENST00000457662 Q9H3A6 140 aa13.28□□□□□ -0.28
TRIM13-206ENST00000457662 PPP1R14DQ9NXH3 145 aa13.28□□□□□ -0.28
TRIM13-206ENST00000457662 XCL2Q9UBD3 114 aa13.28□□□□□ -0.28
TRIM13-206ENST00000457662 AMBPP02760 352 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 GCHFRP30047 84 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 ZNF726P1Q15940 193 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 SLC51BQ86UW2 128 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 C9orf62Q8N4C0 152 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 CSNK1G2-AS1Q8NCQ2 148 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 SUN5Q8TC36 379 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 RARRES2Q99969 163 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 SLC35B3Q9H1N7 401 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 TMEM167BQ9NRX6 74 aa13.27□□□□□ -0.29
TRIM13-206ENST00000457662 TENM3Q9P273 2699 aa13.26□□□□□ -0.29
TRIM13-206ENST00000457662 CSN1S1P47710 185 aa13.26□□□□□ -0.29
TRIM13-206ENST00000457662 FXYD7P58549 80 aa13.26□□□□□ -0.29
TRIM13-206ENST00000457662 FAM74A1Q5RGS3 127 aa13.26□□□□□ -0.29
TRIM13-206ENST00000457662 SSX7Q7RTT5 188 aa13.26□□□□□ -0.29
TRIM13-206ENST00000457662 PRB4P10163 310 aaPredicted RBP13.25□□□□□ -0.29
TRIM13-206ENST00000457662 OR11H2Q8NH07 326 aa13.25□□□□□ -0.29
TRIM13-206ENST00000457662 RXFP4Q8TDU9 374 aa13.25□□□□□ -0.29
TRIM13-206ENST00000457662 TMED6Q8WW62 240 aa13.25□□□□□ -0.29
TRIM13-206ENST00000457662 OTORQ9NRC9 128 aa13.25□□□□□ -0.29
TRIM13-206ENST00000457662 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
TRIM13-206ENST00000457662 PGPA6NDG6 321 aa13.24□□□□□ -0.29
TRIM13-206ENST00000457662 NPIPB6E9PJ23 425 aa13.24□□□□□ -0.29
TRIM13-206ENST00000457662 DPPA3Q6W0C5 159 aa13.24□□□□□ -0.29
TRIM13-206ENST00000457662 LINC00477Q96M19 166 aa13.24□□□□□ -0.29
TRIM13-206ENST00000457662 WWC2-AS2Q96NR7 200 aa13.24□□□□□ -0.29
TRIM13-206ENST00000457662 BOLA2-SMG1P6H3BVE0 249 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 SPINK13Q1W4C9 94 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 IQCF2Q8IXL9 164 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 ARL6IP6Q8N6S5 226 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 STAB2Q8WWQ8 2551 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 MAP1LC3B2A6NCE7 125 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 TSPOP30536 169 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 FHITP49789 147 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 CMTM2Q8TAZ6 248 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 IGF2BP2-AS1Q96M15 143 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 MAP1LC3BQ9GZQ8 125 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 EDA2RQ9HAV5 297 aa13.23□□□□□ -0.29
TRIM13-206ENST00000457662 HUWE1Q7Z6Z7 4374 aaKnown RBP13.22□□□□□ -0.29
TRIM13-206ENST00000457662 ZNF705EA8MWA4 302 aaPredicted RBP13.22□□□□□ -0.29
TRIM13-206ENST00000457662 M0R2Z0 102 aa13.22□□□□□ -0.29
TRIM13-206ENST00000457662 RAB5CP51148 216 aa13.22□□□□□ -0.29
TRIM13-206ENST00000457662 C9orf47Q6ZRZ4 202 aa13.22□□□□□ -0.29
TRIM13-206ENST00000457662 FAM213BQ8TBF2 198 aa13.22□□□□□ -0.29
TRIM13-206ENST00000457662 MBD3L1Q8WWY6 194 aa13.22□□□□□ -0.29
TRIM13-206ENST00000457662 ODF3Q96PU9 254 aa13.22□□□□□ -0.29
TRIM13-206ENST00000457662 AGPAT4-IT1Q9H0P7 198 aa13.22□□□□□ -0.29
TRIM13-206ENST00000457662 RBAKDNA6NC62 111 aa13.21□□□□□ -0.3
TRIM13-206ENST00000457662 SLC25A5P05141 298 aaKnown RBP13.21□□□□□ -0.3
TRIM13-206ENST00000457662 CT45A10P0DMU9 189 aa13.21□□□□□ -0.3
TRIM13-206ENST00000457662 CDKN1BP46527 198 aa13.21□□□□□ -0.3
TRIM13-206ENST00000457662 FGF8P55075 233 aaPredicted RBP13.21□□□□□ -0.3
TRIM13-206ENST00000457662 ERCC8Q13216 396 aa13.21□□□□□ -0.3
TRIM13-206ENST00000457662 ZNF705AQ6ZN79 300 aaPredicted RBP13.21□□□□□ -0.3
TRIM13-206ENST00000457662 GOLT1BQ9Y3E0 138 aa13.21□□□□□ -0.3
TRIM13-206ENST00000457662 IGKV2-40A0A087WW87 121 aaPredicted RBP13.2□□□□□ -0.3
TRIM13-206ENST00000457662 A0A1W2PRE2 83 aa13.2□□□□□ -0.3
TRIM13-206ENST00000457662 DIRC3C9JPN6 131 aa13.2□□□□□ -0.3
TRIM13-206ENST00000457662 CRXO43186 299 aaPredicted RBP13.2□□□□□ -0.3
TRIM13-206ENST00000457662 IGKV2D-40P01614 121 aaPredicted RBP13.2□□□□□ -0.3
TRIM13-206ENST00000457662 NKX2-5P52952 324 aaPredicted RBP13.2□□□□□ -0.3
TRIM13-206ENST00000457662 TMEM78Q5T7P6 136 aa13.2□□□□□ -0.3
TRIM13-206ENST00000457662 SFT2D1Q8WV19 159 aa13.2□□□□□ -0.3
TRIM13-206ENST00000457662 TMPRSS5Q9H3S3 457 aa13.2□□□□□ -0.3
TRIM13-206ENST00000457662 INSP01308 110 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms