RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 HLA-DMBP28068 263 aa9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 TEN1Q86WV5 123 aa9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 WIPF2Q8TF74 440 aaPredicted RBP9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 PTH2Q96A98 100 aa9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 DUX3Q96PT4 197 aa9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 CACNA1EQ15878 2313 aa9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 IGLV3-32A0A0A0MS00 114 aa9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 PAX4O43316 350 aa9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 SRD5A1P18405 259 aa9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 ERCC8Q13216 396 aa9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 TNRC6AQ8NDV7 1962 aaKnown RBP9.98□□□□□ -0.81
NEDD4L-208ENST00000456173 INAFM2P0DMQ5 153 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 ZCCHC24Q8N2G6 241 aaKnown RBP9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 FAM236AA0A1B0GUQ0 79 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 FAM236BA0A1B0GV22 79 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 TP53TG1Q9Y2A0 90 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 NBR2O15453 112 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 MT-ATP8P03928 68 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 ZNF524Q96C55 264 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 DUX5Q96PT3 197 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 IGHV3-73A0A0B4J1V6 119 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 F8VRH5 84 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 IGHV3-11P01762 117 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 MAFAQ8NHW3 353 aaPredicted RBP9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 SBF1O95248 1867 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 ARHGAP21Q5T5U3 1957 aa9.97□□□□□ -0.81
NEDD4L-208ENST00000456173 AHRRA9YTQ3 701 aa9.96□□□□□ -0.81
NEDD4L-208ENST00000456173 IGHV3OR16-10A0A075B7F0 116 aa9.96□□□□□ -0.81
NEDD4L-208ENST00000456173 TCTEX1D4Q5JR98 221 aa9.96□□□□□ -0.81
NEDD4L-208ENST00000456173 FAM120AOSQ5T036 256 aa9.96□□□□□ -0.81
NEDD4L-208ENST00000456173 C16orf54Q6UWD8 224 aa9.96□□□□□ -0.81
NEDD4L-208ENST00000456173 EFEMP2O95967 443 aa9.96□□□□□ -0.82
NEDD4L-208ENST00000456173 A0A087WWL8 130 aa9.96□□□□□ -0.82
NEDD4L-208ENST00000456173 ATP1A1-AS1Q5TC04 95 aa9.96□□□□□ -0.82
NEDD4L-208ENST00000456173 TMEM167AQ8TBQ9 72 aa9.96□□□□□ -0.82
NEDD4L-208ENST00000456173 SYNJ2BPP57105 145 aa9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 TTC28Q96AY4 2481 aa9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 ARTNQ5T4W7 220 aa9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 RNF166Q96A37 237 aaPredicted RBP9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 RBM3P98179 157 aaKnown RBP9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 NEGR1Q7Z3B1 354 aa9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 LYPD1Q8N2G4 141 aa9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 PRDM6Q9NQX0 595 aa9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 PATJQ8NI35 1801 aa9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 SPAARA0A1B0GVQ0 90 aa9.95□□□□□ -0.82
NEDD4L-208ENST00000456173 LTAP01374 205 aa9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 UTF1Q5T230 341 aa9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 CFC1BP0CG36 223 aa9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 CFC1P0CG37 223 aa9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 CENPVQ7Z7K6 275 aaPredicted RBP9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 SOCS3O14543 225 aa9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 ZNRD1Q9P1U0 126 aa9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 GREB1LQ9C091 1923 aaPredicted RBP9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 Q6ZUT4 128 aa9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 SPANXDQ9BXN6 97 aa9.94□□□□□ -0.82
NEDD4L-208ENST00000456173 SRRM5B3KS81 715 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 FAM27E3Q08E93 113 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 TMEM75Q8N9X5 138 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 PRR7Q8TB68 274 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 EPOPA6NHQ4 379 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 ZNF415Q09FC8 603 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 PRIMA1Q86XR5 153 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 A0A087WX48 190 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 TIMM23O14925 209 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 TRPM7Q96QT4 1865 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 VWC2LB2RUY7 222 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 LEPROTO15243 131 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 TMEM14BQ9NUH8 114 aa9.93□□□□□ -0.82
NEDD4L-208ENST00000456173 CACNA1HO95180 2353 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 PLA2G5P39877 138 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 YPEL4Q96NS1 127 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 TRAV12-1A0A0B4J245 112 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 POU2AF1Q16633 256 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 TMEM86BQ8N661 226 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 LINC01587Q99440 93 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 SRRM4A7MD48 611 aaKnown RBP9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 ADARB2-AS1A8MUL3 147 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 IGHG4P01861 327 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 DTX2Q86UW9 622 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 LY6G5BQ8NDX9 201 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 GGNQ86UU5 652 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 NEU4Q8WWR8 484 aaPredicted RBP9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 SHANK2-AS3Q9BTD1 123 aa9.92□□□□□ -0.82
NEDD4L-208ENST00000456173 C2orf70A6NJV1 201 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 ETV2O00321 342 aaPredicted RBP9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 FXYD5Q96DB9 178 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 ARFGEF3Q5TH69 2177 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 GTF3C1Q12789 2109 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 LCTP09848 1927 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 C5orf67F2Z3F1 127 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 J3QQQ9 107 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 APOBEC3AP31941 199 aaPredicted RBP9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 PRR20EP86478 221 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 PRR20CP86479 221 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 PRR20DP86480 221 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 PRR20BP86481 221 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 PRR20AP86496 221 aa9.91□□□□□ -0.82
NEDD4L-208ENST00000456173 NDPQ00604 133 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms