RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 RNF24Q9Y225 148 aa12.65□□□□□ -0.38
CCDC144B-204ENST00000455629 TRAV5A0A0B4J249 113 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 SPATA31B1PQ5VZV4 182 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 ZNF767PQ75MW2 155 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 MIR17HGQ75NE6 70 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 OR10G4Q8NGN3 311 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 OR10G9Q8NGN4 311 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 OR10G7Q8NGN6 311 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 GPR82Q96P67 336 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 MRPL32Q9BYC8 188 aaKnown RBP12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 FUT9Q9Y231 359 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
CCDC144B-204ENST00000455629 A0A1B0GVY2 172 aa12.63□□□□□ -0.39
CCDC144B-204ENST00000455629 MBP02144 154 aa12.63□□□□□ -0.39
CCDC144B-204ENST00000455629 SEC11BP0C7V7 166 aa12.63□□□□□ -0.39
CCDC144B-204ENST00000455629 HLA-DRB4P13762 266 aa12.63□□□□□ -0.39
CCDC144B-204ENST00000455629 RHOBP62745 196 aa12.63□□□□□ -0.39
CCDC144B-204ENST00000455629 ZNF705AQ6ZN79 300 aaPredicted RBP12.63□□□□□ -0.39
CCDC144B-204ENST00000455629 NEU1Q99519 415 aa12.63□□□□□ -0.39
CCDC144B-204ENST00000455629 HLA-DRB4X5D2U9 266 aa12.63□□□□□ -0.39
CCDC144B-204ENST00000455629 TMEM189A5PLL7 270 aa12.62□□□□□ -0.39
CCDC144B-204ENST00000455629 SMIM9A6NGZ8 99 aa12.62□□□□□ -0.39
CCDC144B-204ENST00000455629 MRPS12O15235 138 aaKnown RBP12.62□□□□□ -0.39
CCDC144B-204ENST00000455629 RPL7P18124 248 aaKnown RBP12.62□□□□□ -0.39
CCDC144B-204ENST00000455629 GALR1P47211 349 aa12.62□□□□□ -0.39
CCDC144B-204ENST00000455629 FAM122CQ6P4D5 195 aa12.62□□□□□ -0.39
CCDC144B-204ENST00000455629 RPRMQ9NS64 109 aa12.62□□□□□ -0.39
CCDC144B-204ENST00000455629 PLA2G2EQ9NZK7 142 aa12.62□□□□□ -0.39
CCDC144B-204ENST00000455629 PKHD1P08F94 4074 aa12.62□□□□□ -0.39
CCDC144B-204ENST00000455629 FAT2Q9NYQ8 4349 aa12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 ZNF705FA8MVS1 300 aaPredicted RBP12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 ZNF705DP0CH99 300 aaPredicted RBP12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 ZNF705BP0CI00 300 aaPredicted RBP12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 SPART-AS1P0CW21 52 aa12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 AKR1C8PQ5T2L2 129 aa12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 BPIFA4PQ86YQ2 179 aa12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 TMED6Q8WW62 240 aa12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 FAM167A-AS1Q96KT0 104 aa12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 SLC25A2Q9BXI2 301 aa12.61□□□□□ -0.39
CCDC144B-204ENST00000455629 A0A1W2PPV4 95 aa12.6□□□□□ -0.39
CCDC144B-204ENST00000455629 MED14OSP0DP75 135 aa12.6□□□□□ -0.39
CCDC144B-204ENST00000455629 CDC34P49427 236 aaPredicted RBP12.6□□□□□ -0.39
CCDC144B-204ENST00000455629 FAM210BQ96KR6 192 aa12.6□□□□□ -0.39
CCDC144B-204ENST00000455629 C17orf77Q96MU5 243 aa12.6□□□□□ -0.39
CCDC144B-204ENST00000455629 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
CCDC144B-204ENST00000455629 TMEM14CQ9P0S9 112 aa12.6□□□□□ -0.39
CCDC144B-204ENST00000455629 TEX48A0A1B0GUV7 120 aa12.59□□□□□ -0.39
CCDC144B-204ENST00000455629 PRSS29PA6NIE9 313 aa12.59□□□□□ -0.39
CCDC144B-204ENST00000455629 EIF3GO75821 320 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC144B-204ENST00000455629 ID1P41134 155 aa12.59□□□□□ -0.39
CCDC144B-204ENST00000455629 LGALS9BQ3B8N2 356 aa12.59□□□□□ -0.39
CCDC144B-204ENST00000455629 EIF5AL1Q6IS14 154 aaKnown RBP12.59□□□□□ -0.39
CCDC144B-204ENST00000455629 ACTR3CQ9C0K3 210 aaPredicted RBP12.59□□□□□ -0.39
CCDC144B-204ENST00000455629 DNAH2Q9P225 4427 aa12.59□□□□□ -0.39
CCDC144B-204ENST00000455629 A0A087X0K7 114 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 UMAD1C9J7I0 102 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 RTL8CO15255 209 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 IGLC2P0DOY2 106 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 PSMB3P49720 205 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 TAS2R45P59539 299 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 ZNF726P1Q15940 193 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 KHDC3LQ587J8 217 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 GDF5OSQ5U4N7 250 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 FOXI2Q6ZQN5 318 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 RAB24Q969Q5 203 aa12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 SAV1Q9H4B6 383 aaPredicted RBP12.58□□□□□ -0.4
CCDC144B-204ENST00000455629 DNAH17Q9UFH2 4485 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 H3BQ15 152 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 M0R2N4 97 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 SOCS3O14543 225 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 PYYP10082 97 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 EMP1P54849 157 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 SSX7Q7RTT5 188 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 ZNF503Q96F45 646 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 LINC00052Q96N35 136 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 OR51M1Q9H341 326 aa12.57□□□□□ -0.4
CCDC144B-204ENST00000455629 CTXND1A0A1B0GTU2 59 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 HMGB3O15347 200 aaKnown RBP12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 OR7C2O60412 319 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 IGKV3-20P01619 116 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 SNRPCP09234 159 aaKnown RBP12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 STAG3L2P0CL84 134 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 STAG3L3P0CL85 134 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 HIST1H1EP10412 219 aaKnown RBP12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 FHITP49789 147 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 MEOX2P50222 304 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 PHYHIPLQ96FC7 376 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 DKK2Q9UBU2 259 aa12.56□□□□□ -0.4
CCDC144B-204ENST00000455629 IGHV3OR16-12A0A075B7B8 117 aa12.55□□□□□ -0.4
CCDC144B-204ENST00000455629 H3BTX0 84 aa12.55□□□□□ -0.4
CCDC144B-204ENST00000455629 SAMD13Q5VXD3 122 aa12.55□□□□□ -0.4
CCDC144B-204ENST00000455629 DPPA3Q6W0C5 159 aa12.55□□□□□ -0.4
CCDC144B-204ENST00000455629 PQLC2Q6ZP29 291 aa12.55□□□□□ -0.4
CCDC144B-204ENST00000455629 UBE2DNLQ8IWF7 75 aa12.55□□□□□ -0.4
CCDC144B-204ENST00000455629 RNF141Q8WVD5 230 aa12.55□□□□□ -0.4
CCDC144B-204ENST00000455629 FXYD5Q96DB9 178 aa12.55□□□□□ -0.4
CCDC144B-204ENST00000455629 NIPSNAP3BQ9BS92 247 aa12.55□□□□□ -0.4
CCDC144B-204ENST00000455629 ZNF586Q9NXT0 402 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms