RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 AQP10Q96PS8 301 aa11.7□□□□□ -0.54
SMPD4-214ENST00000455548 OR51M1Q9H341 326 aa11.7□□□□□ -0.54
SMPD4-214ENST00000455548 WFDC1Q9HC57 220 aa11.7□□□□□ -0.54
SMPD4-214ENST00000455548 PLECQ15149 4684 aaKnown RBP11.69□□□□□ -0.54
SMPD4-214ENST00000455548 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
SMPD4-214ENST00000455548 CRXO43186 299 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-214ENST00000455548 ZNF266Q14584 549 aa11.69□□□□□ -0.54
SMPD4-214ENST00000455548 BAP18Q8IXM2 172 aa11.69□□□□□ -0.54
SMPD4-214ENST00000455548 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
SMPD4-214ENST00000455548 PAXXQ9BUH6 204 aa11.69□□□□□ -0.54
SMPD4-214ENST00000455548 AAMDCQ9H7C9 122 aa11.69□□□□□ -0.54
SMPD4-214ENST00000455548 SACSQ9NZJ4 4579 aa11.68□□□□□ -0.54
SMPD4-214ENST00000455548 PRAC2D3DTV9 90 aa11.68□□□□□ -0.54
SMPD4-214ENST00000455548 OR7C2O60412 319 aa11.68□□□□□ -0.54
SMPD4-214ENST00000455548 NDUFB4O95168 129 aa11.68□□□□□ -0.54
SMPD4-214ENST00000455548 NBEAP1P0C6P0 100 aa11.68□□□□□ -0.54
SMPD4-214ENST00000455548 TSPOP30536 169 aa11.68□□□□□ -0.54
SMPD4-214ENST00000455548 CDKN1BP46527 198 aa11.68□□□□□ -0.54
SMPD4-214ENST00000455548 TMEM256Q8N2U0 113 aa11.68□□□□□ -0.54
SMPD4-214ENST00000455548 INO80EQ8NBZ0 244 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-214ENST00000455548 CELA1Q9UNI1 258 aa11.68□□□□□ -0.54
SMPD4-214ENST00000455548 TRAV12-2A0A075B6T6 113 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 TRAV10A0A0B4J240 114 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 LOC102723971A0A1B0GUV8 181 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 SPART-AS1P0CW21 52 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 PRB4P10163 310 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-214ENST00000455548 TAS2R45P59539 299 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 ACOT6Q3I5F7 207 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-214ENST00000455548 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 Q5BKY6 102 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 Q6ZTC4 211 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 C2CD4CQ8TF44 421 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 RNF141Q8WVD5 230 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 RYR2Q92736 4967 aa11.67□□□□□ -0.54
SMPD4-214ENST00000455548 FXYD6-FXYD2A0A087WZ82 144 aa11.66□□□□□ -0.54
SMPD4-214ENST00000455548 M0R3E3 92 aa11.66□□□□□ -0.54
SMPD4-214ENST00000455548 M6PRP20645 277 aa11.66□□□□□ -0.54
SMPD4-214ENST00000455548 EMP1P54849 157 aa11.66□□□□□ -0.54
SMPD4-214ENST00000455548 C12orf74Q32Q52 190 aa11.66□□□□□ -0.54
SMPD4-214ENST00000455548 FXYD5Q96DB9 178 aa11.66□□□□□ -0.54
SMPD4-214ENST00000455548 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
SMPD4-214ENST00000455548 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
SMPD4-214ENST00000455548 OR10J4P0C629 311 aa11.65□□□□□ -0.54
SMPD4-214ENST00000455548 LEPP41159 167 aa11.65□□□□□ -0.54
SMPD4-214ENST00000455548 TCTAP57738 103 aa11.65□□□□□ -0.54
SMPD4-214ENST00000455548 ICAM4Q14773 271 aa11.65□□□□□ -0.54
SMPD4-214ENST00000455548 LYPD1Q8N2G4 141 aa11.65□□□□□ -0.54
SMPD4-214ENST00000455548 EXOC3-AS1Q8N2X6 119 aa11.65□□□□□ -0.54
SMPD4-214ENST00000455548 RPP25LQ8N5L8 163 aaKnown RBP11.65□□□□□ -0.54
SMPD4-214ENST00000455548 LINC00476Q8WZB0 136 aa11.65□□□□□ -0.54
SMPD4-214ENST00000455548 C20orf144Q9BQM9 153 aa11.65□□□□□ -0.54
SMPD4-214ENST00000455548 A0A1W2PPV4 95 aa11.64□□□□□ -0.55
SMPD4-214ENST00000455548 UBE2L3P68036 154 aaKnown RBP11.64□□□□□ -0.55
SMPD4-214ENST00000455548 HSD17B11Q8NBQ5 300 aa11.64□□□□□ -0.55
SMPD4-214ENST00000455548 OR2G3Q8NGZ4 309 aa11.64□□□□□ -0.55
SMPD4-214ENST00000455548 LINC01587Q99440 93 aa11.64□□□□□ -0.55
SMPD4-214ENST00000455548 PSMG3Q9BT73 122 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-214ENST00000455548 DKK2Q9UBU2 259 aa11.64□□□□□ -0.55
SMPD4-214ENST00000455548 TNFSF18Q9UNG2 199 aa11.64□□□□□ -0.55
SMPD4-214ENST00000455548 ZNF705GA8MUZ8 300 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-214ENST00000455548 CT45A10P0DMU9 189 aa11.63□□□□□ -0.55
SMPD4-214ENST00000455548 TAS2R60P59551 318 aa11.63□□□□□ -0.55
SMPD4-214ENST00000455548 FAM222AQ5U5X8 452 aa11.63□□□□□ -0.55
SMPD4-214ENST00000455548 PQLC2Q6ZP29 291 aa11.63□□□□□ -0.55
SMPD4-214ENST00000455548 ZNF503Q96F45 646 aa11.63□□□□□ -0.55
SMPD4-214ENST00000455548 PHYHIPLQ96FC7 376 aa11.63□□□□□ -0.55
SMPD4-214ENST00000455548 LINC00477Q96M19 166 aa11.63□□□□□ -0.55
SMPD4-214ENST00000455548 YTHDF2Q9Y5A9 579 aaKnown RBP11.63□□□□□ -0.55
SMPD4-214ENST00000455548 DEFB131BA0A096LNP1 70 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 BORCS7-ASMTA0A0B4J1R7 106 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 RNF222A6NCQ9 220 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 IGLL5B9A064 214 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 H7BYZ3 331 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 RAB2AP61019 212 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 SERF2P84101 59 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 FAM122CQ6P4D5 195 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 ZNF767PQ75MW2 155 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 OR10G4Q8NGN3 311 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 OR10G9Q8NGN4 311 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 OR10G7Q8NGN6 311 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 NIPSNAP3BQ9BS92 247 aa11.62□□□□□ -0.55
SMPD4-214ENST00000455548 DNAH1Q9P2D7 4330 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 LY6G6CO95867 125 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 MBP02144 154 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 ATP6V0CP27449 155 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 CSN1S1P47710 185 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 RANP62826 216 aaKnown RBP11.61□□□□□ -0.55
SMPD4-214ENST00000455548 ERCC8Q13216 396 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 TMEM78Q5T7P6 136 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 GFI1BQ5VTD9 330 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 ZNF493Q6ZR52 646 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 C9orf47Q6ZRZ4 202 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 AGPAT4-IT1Q9H0P7 198 aa11.61□□□□□ -0.55
SMPD4-214ENST00000455548 LYRM9A8MSI8 78 aa11.6□□□□□ -0.55
SMPD4-214ENST00000455548 CDC34P49427 236 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-214ENST00000455548 DAD1P61803 113 aa11.6□□□□□ -0.55
SMPD4-214ENST00000455548 KIR3DS1Q14943 382 aa11.6□□□□□ -0.55
SMPD4-214ENST00000455548 GNPNAT1Q96EK6 184 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms