RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PET117Q6UWS5 81 aa12.42□□□□□ -0.42
SNX17-204ENST00000453453 FAM167A-AS1Q96KT0 104 aa12.42□□□□□ -0.42
SNX17-204ENST00000453453 TMEM70Q9BUB7 260 aa12.42□□□□□ -0.42
SNX17-204ENST00000453453 SONP18583 2426 aaKnown RBP12.41□□□□□ -0.42
SNX17-204ENST00000453453 SH2D7A6NKC9 451 aaPredicted RBP12.41□□□□□ -0.42
SNX17-204ENST00000453453 OR5AL1P0C617 328 aa12.41□□□□□ -0.42
SNX17-204ENST00000453453 HINT1P49773 126 aaPredicted RBP12.41□□□□□ -0.42
SNX17-204ENST00000453453 UBE2L3P68036 154 aaKnown RBP12.41□□□□□ -0.42
SNX17-204ENST00000453453 NHLRC2Q8NBF2 726 aa12.41□□□□□ -0.42
SNX17-204ENST00000453453 ZNF418Q8TF45 676 aaPredicted RBP12.41□□□□□ -0.42
SNX17-204ENST00000453453 WNT10AQ9GZT5 417 aa12.41□□□□□ -0.42
SNX17-204ENST00000453453 HIVEP2P31629 2446 aa12.41□□□□□ -0.42
SNX17-204ENST00000453453 NPIPB5A8MRT5 1133 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 PEX7O00628 323 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 ATP6V0E1O15342 81 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 MFAP2P55001 183 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 C21orf62-AS1Q17RA5 79 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 EBLN2Q6P2I7 272 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 NUP35Q8NFH5 326 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 RNASE8Q8TDE3 154 aaKnown RBP12.4□□□□□ -0.42
SNX17-204ENST00000453453 SLC25A2Q9BXI2 301 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 NPFFR1Q9GZQ6 430 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 ZNF492Q9P255 531 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 F11RQ9Y624 299 aaKnown RBP12.4□□□□□ -0.42
SNX17-204ENST00000453453 CELSR1Q9NYQ6 3014 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 CORTO00230 105 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 SPINK4O60575 86 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 IGHG2P01859 326 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 ECSCRQ19T08 205 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 UNQ5815/PRO19632Q6UWF5 114 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 STXBP6Q8NFX7 210 aa12.4□□□□□ -0.42
SNX17-204ENST00000453453 FAM231BA6NCW3 169 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 IGLL1P15814 213 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 C12orf54Q6X4T0 127 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 ZNF329Q86UD4 541 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 TTC9CQ8N5M4 171 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 OR4C5Q8NGB2 326 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 NUDT11Q96G61 164 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 GFRA4Q9GZZ7 299 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 MS4A6AQ9H2W1 248 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 SVEP1Q4LDE5 3571 aa12.39□□□□□ -0.43
SNX17-204ENST00000453453 IGKV1OR2-108A0A075B7D4 117 aa12.38□□□□□ -0.43
SNX17-204ENST00000453453 DNAJC9-AS1A6NH13 148 aa12.38□□□□□ -0.43
SNX17-204ENST00000453453 CRYGCP07315 174 aa12.38□□□□□ -0.43
SNX17-204ENST00000453453 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
SNX17-204ENST00000453453 BLCAPP62952 87 aa12.38□□□□□ -0.43
SNX17-204ENST00000453453 SLC35B1P78383 322 aa12.38□□□□□ -0.43
SNX17-204ENST00000453453 ETFRF1Q6IPR1 90 aa12.38□□□□□ -0.43
SNX17-204ENST00000453453 Q71RC1 249 aaPredicted RBP12.38□□□□□ -0.43
SNX17-204ENST00000453453 PMCHL2Q9BQD1 86 aa12.38□□□□□ -0.43
SNX17-204ENST00000453453 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
SNX17-204ENST00000453453 KLF12Q9Y4X4 402 aa12.38□□□□□ -0.43
SNX17-204ENST00000453453 TRAV41A0A0B4J266 112 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 TRAV34A0A0B4J273 112 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 MYCNOSP40205 109 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 CRIP2P52943 208 aaPredicted RBP12.37□□□□□ -0.43
SNX17-204ENST00000453453 HBBP68871 147 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 Q56UQ5 140 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 ASPHD1Q5U4P2 390 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 RNASEKQ6P5S7 137 aaKnown RBP12.37□□□□□ -0.43
SNX17-204ENST00000453453 THAP8Q8NA92 274 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 FAM110DQ8TAY7 271 aaPredicted RBP12.37□□□□□ -0.43
SNX17-204ENST00000453453 JMJD8Q96S16 334 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 PAXXQ9BUH6 204 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 INAFM1C9JVW0 142 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 COX7A2P2O60397 106 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 IGF1P05019 195 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 GDF5OSQ5U4N7 250 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 LCN12Q6JVE5 192 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 DUX5Q96PT3 197 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 THYN1Q9P016 225 aa12.37□□□□□ -0.43
SNX17-204ENST00000453453 LINC01548A6NM66 108 aa12.36□□□□□ -0.43
SNX17-204ENST00000453453 A8MWL6 223 aa12.36□□□□□ -0.43
SNX17-204ENST00000453453 C10orf113Q5VZT2 155 aa12.36□□□□□ -0.43
SNX17-204ENST00000453453 PVRIGQ6DKI7 326 aa12.36□□□□□ -0.43
SNX17-204ENST00000453453 ZNF355PQ9NSJ1 428 aa12.36□□□□□ -0.43
SNX17-204ENST00000453453 OR4C46A6NHA9 309 aa12.35□□□□□ -0.43
SNX17-204ENST00000453453 HSBP1L1C9JCN9 74 aa12.35□□□□□ -0.43
SNX17-204ENST00000453453 SYS1-DBNDD2H3BUS1 97 aa12.35□□□□□ -0.43
SNX17-204ENST00000453453 SLC25A34Q6PIV7 304 aa12.35□□□□□ -0.43
SNX17-204ENST00000453453 DEFB125Q8N687 156 aa12.35□□□□□ -0.43
SNX17-204ENST00000453453 RPP21Q9H633 154 aaKnown RBP12.35□□□□□ -0.43
SNX17-204ENST00000453453 ZNF580Q9UK33 172 aa12.35□□□□□ -0.43
SNX17-204ENST00000453453 MXRA5Q9NR99 2828 aa12.35□□□□□ -0.43
SNX17-204ENST00000453453 TCRBV4S1A1TA0A5B7 111 aa12.34□□□□□ -0.43
SNX17-204ENST00000453453 HIGD1CA8MV81 97 aa12.34□□□□□ -0.43
SNX17-204ENST00000453453 G3V318 75 aa12.34□□□□□ -0.43
SNX17-204ENST00000453453 SMIM15Q7Z3B0 74 aa12.34□□□□□ -0.43
SNX17-204ENST00000453453 ATOH7Q8N100 152 aa12.34□□□□□ -0.43
SNX17-204ENST00000453453 HILS1P60008 231 aa12.33□□□□□ -0.43
SNX17-204ENST00000453453 FXYD5Q96DB9 178 aa12.33□□□□□ -0.43
SNX17-204ENST00000453453 FMC1Q96HJ9 113 aa12.33□□□□□ -0.43
SNX17-204ENST00000453453 GPR82Q96P67 336 aa12.33□□□□□ -0.43
SNX17-204ENST00000453453 NDFIP1Q9BT67 221 aa12.33□□□□□ -0.43
SNX17-204ENST00000453453 HIVEP1P15822 2718 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 IGLV11-55A0A075B6I3 123 aa12.33□□□□□ -0.44
SNX17-204ENST00000453453 TAX1BP3O14907 124 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms