RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 FXYD5Q96DB9 178 aa14.47□□□□□ -0.09
COL9A3-202ENST00000452372 ZNF503Q96F45 646 aa14.47□□□□□ -0.09
COL9A3-202ENST00000452372 HMSDA8MTL9 139 aa14.46□□□□□ -0.09
COL9A3-202ENST00000452372 OR7C2O60412 319 aa14.46□□□□□ -0.09
COL9A3-202ENST00000452372 KHDC3LQ587J8 217 aa14.46□□□□□ -0.09
COL9A3-202ENST00000452372 OR11H4Q8NGC9 324 aa14.46□□□□□ -0.09
COL9A3-202ENST00000452372 OR10G4Q8NGN3 311 aa14.46□□□□□ -0.09
COL9A3-202ENST00000452372 OR10G9Q8NGN4 311 aa14.46□□□□□ -0.09
COL9A3-202ENST00000452372 OR10G7Q8NGN6 311 aa14.46□□□□□ -0.09
COL9A3-202ENST00000452372 GNPNAT1Q96EK6 184 aaPredicted RBP14.46□□□□□ -0.09
COL9A3-202ENST00000452372 A0A1W2PPV4 95 aa14.45□□□□□ -0.1
COL9A3-202ENST00000452372 PRAC2D3DTV9 90 aa14.45□□□□□ -0.1
COL9A3-202ENST00000452372 JTBO76095 146 aa14.45□□□□□ -0.1
COL9A3-202ENST00000452372 OR10J4P0C629 311 aa14.45□□□□□ -0.1
COL9A3-202ENST00000452372 MRPL53Q96EL3 112 aaKnown RBP14.45□□□□□ -0.1
COL9A3-202ENST00000452372 PRELID1Q9Y255 219 aa14.45□□□□□ -0.1
COL9A3-202ENST00000452372 X6R8D5 127 aa14.45□□□□□ -0.1
COL9A3-202ENST00000452372 MBP02144 154 aa14.44□□□□□ -0.1
COL9A3-202ENST00000452372 AMBPP02760 352 aa14.44□□□□□ -0.1
COL9A3-202ENST00000452372 PRB4P10163 310 aaPredicted RBP14.44□□□□□ -0.1
COL9A3-202ENST00000452372 MIFP14174 115 aa14.44□□□□□ -0.1
COL9A3-202ENST00000452372 ZNF345Q14585 488 aa14.44□□□□□ -0.1
COL9A3-202ENST00000452372 FAM122CQ6P4D5 195 aa14.44□□□□□ -0.1
COL9A3-202ENST00000452372 ZNF705AQ6ZN79 300 aaPredicted RBP14.44□□□□□ -0.1
COL9A3-202ENST00000452372 Q8NAQ8 132 aa14.44□□□□□ -0.1
COL9A3-202ENST00000452372 SH3BGRL3Q9H299 93 aa14.44□□□□□ -0.1
COL9A3-202ENST00000452372 C11orf68Q9H3H3 251 aaKnown RBP14.44□□□□□ -0.1
COL9A3-202ENST00000452372 CYTL1Q9NRR1 136 aa14.44□□□□□ -0.1
COL9A3-202ENST00000452372 M0R3E3 92 aa14.43□□□□□ -0.1
COL9A3-202ENST00000452372 EXOC3-AS1Q8N2X6 119 aa14.43□□□□□ -0.1
COL9A3-202ENST00000452372 KCNRGQ8N5I3 272 aa14.43□□□□□ -0.1
COL9A3-202ENST00000452372 RPP25LQ8N5L8 163 aaKnown RBP14.43□□□□□ -0.1
COL9A3-202ENST00000452372 OR10J6PQ8NGY7 276 aa14.43□□□□□ -0.1
COL9A3-202ENST00000452372 ST6GAL2Q96JF0 529 aa14.43□□□□□ -0.1
COL9A3-202ENST00000452372 AAMDCQ9H7C9 122 aa14.43□□□□□ -0.1
COL9A3-202ENST00000452372 EIF3GO75821 320 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL9A3-202ENST00000452372 UBE2L3P68036 154 aaKnown RBP14.42□□□□□ -0.1
COL9A3-202ENST00000452372 ICAM4Q14773 271 aa14.42□□□□□ -0.1
COL9A3-202ENST00000452372 SPINK13Q1W4C9 94 aa14.42□□□□□ -0.1
COL9A3-202ENST00000452372 PQLC2Q6ZP29 291 aa14.42□□□□□ -0.1
COL9A3-202ENST00000452372 IGF2BP2-AS1Q96M15 143 aa14.42□□□□□ -0.1
COL9A3-202ENST00000452372 NEU1Q99519 415 aa14.42□□□□□ -0.1
COL9A3-202ENST00000452372 PPP1R14DQ9NXH3 145 aa14.42□□□□□ -0.1
COL9A3-202ENST00000452372 IGHV4-28A0A0C4DH34 117 aa14.41□□□□□ -0.1
COL9A3-202ENST00000452372 BOLA2-SMG1P6H3BVE0 249 aa14.41□□□□□ -0.1
COL9A3-202ENST00000452372 M0R2Z0 102 aa14.41□□□□□ -0.1
COL9A3-202ENST00000452372 CRXO43186 299 aaPredicted RBP14.41□□□□□ -0.1
COL9A3-202ENST00000452372 CDC34P49427 236 aaPredicted RBP14.41□□□□□ -0.1
COL9A3-202ENST00000452372 C1orf158Q8N1D5 194 aa14.41□□□□□ -0.1
COL9A3-202ENST00000452372 LYPD1Q8N2G4 141 aa14.41□□□□□ -0.1
COL9A3-202ENST00000452372 PHYHIPLQ96FC7 376 aa14.41□□□□□ -0.1
COL9A3-202ENST00000452372 GOLT1BQ9Y3E0 138 aa14.41□□□□□ -0.1
COL9A3-202ENST00000452372 A0A0D9SG52 128 aa14.4□□□□□ -0.1
COL9A3-202ENST00000452372 SMIM9A6NGZ8 99 aa14.4□□□□□ -0.1
COL9A3-202ENST00000452372 DEFB4AO15263 64 aa14.4□□□□□ -0.1
COL9A3-202ENST00000452372 RBMY1A1P0DJD3 496 aaKnown RBP14.4□□□□□ -0.1
COL9A3-202ENST00000452372 RBMY1CP0DJD4 496 aa14.4□□□□□ -0.1
COL9A3-202ENST00000452372 RANP62826 216 aaKnown RBP14.4□□□□□ -0.1
COL9A3-202ENST00000452372 RBMY1FQ15415 496 aaKnown RBP14.4□□□□□ -0.1
COL9A3-202ENST00000452372 RAB24Q969Q5 203 aa14.4□□□□□ -0.1
COL9A3-202ENST00000452372 ARPC5LQ9BPX5 153 aa14.4□□□□□ -0.1
COL9A3-202ENST00000452372 NPIPB6E9PJ23 425 aa14.39□□□□□ -0.11
COL9A3-202ENST00000452372 STAG3L2P0CL84 134 aa14.39□□□□□ -0.11
COL9A3-202ENST00000452372 STAG3L3P0CL85 134 aa14.39□□□□□ -0.11
COL9A3-202ENST00000452372 TCTE3Q8IZS6 198 aa14.39□□□□□ -0.11
COL9A3-202ENST00000452372 IGHV3OR16-12A0A075B7B8 117 aa14.38□□□□□ -0.11
COL9A3-202ENST00000452372 HMGB3O15347 200 aaKnown RBP14.38□□□□□ -0.11
COL9A3-202ENST00000452372 INSP01308 110 aa14.38□□□□□ -0.11
COL9A3-202ENST00000452372 CDKN1BP46527 198 aa14.38□□□□□ -0.11
COL9A3-202ENST00000452372 ACTR3CQ9C0K3 210 aaPredicted RBP14.38□□□□□ -0.11
COL9A3-202ENST00000452372 Q9H3A6 140 aa14.38□□□□□ -0.11
COL9A3-202ENST00000452372 TRAV12-2A0A075B6T6 113 aa14.37□□□□□ -0.11
COL9A3-202ENST00000452372 ARL14EPLP0DKL9 152 aa14.37□□□□□ -0.11
COL9A3-202ENST00000452372 CT45A10P0DMU9 189 aa14.37□□□□□ -0.11
COL9A3-202ENST00000452372 TSPOP30536 169 aa14.37□□□□□ -0.11
COL9A3-202ENST00000452372 BAP18Q8IXM2 172 aa14.37□□□□□ -0.11
COL9A3-202ENST00000452372 LINC00477Q96M19 166 aa14.37□□□□□ -0.11
COL9A3-202ENST00000452372 ODF3Q96PU9 254 aa14.37□□□□□ -0.11
COL9A3-202ENST00000452372 C9orf47Q6ZRZ4 202 aa14.36□□□□□ -0.11
COL9A3-202ENST00000452372 C11orf45Q8TAV5 145 aa14.36□□□□□ -0.11
COL9A3-202ENST00000452372 TMEM208Q9BTX3 173 aa14.36□□□□□ -0.11
COL9A3-202ENST00000452372 KANTRA0A1W2PQU2 76 aa14.35□□□□□ -0.11
COL9A3-202ENST00000452372 BCL2L11O43521 198 aa14.35□□□□□ -0.11
COL9A3-202ENST00000452372 ERCC8Q13216 396 aa14.35□□□□□ -0.11
COL9A3-202ENST00000452372 AKR1C8PQ5T2L2 129 aa14.35□□□□□ -0.11
COL9A3-202ENST00000452372 SUN5Q8TC36 379 aa14.35□□□□□ -0.11
COL9A3-202ENST00000452372 AGPAT4-IT1Q9H0P7 198 aa14.35□□□□□ -0.11
COL9A3-202ENST00000452372 OTORQ9NRC9 128 aa14.35□□□□□ -0.11
COL9A3-202ENST00000452372 hCG_2014768A0A024R1R8 64 aa14.34□□□□□ -0.11
COL9A3-202ENST00000452372 HBE1P02100 147 aa14.34□□□□□ -0.11
COL9A3-202ENST00000452372 CSN1S1P47710 185 aa14.34□□□□□ -0.11
COL9A3-202ENST00000452372 TMUB2Q71RG4 321 aa14.34□□□□□ -0.11
COL9A3-202ENST00000452372 RXFP4Q8TDU9 374 aa14.34□□□□□ -0.11
COL9A3-202ENST00000452372 KMT2AQ03164 3969 aa14.33□□□□□ -0.11
COL9A3-202ENST00000452372 IGKV2-40A0A087WW87 121 aaPredicted RBP14.33□□□□□ -0.12
COL9A3-202ENST00000452372 CTXND1A0A1B0GTU2 59 aa14.33□□□□□ -0.12
COL9A3-202ENST00000452372 TMEM189A5PLL7 270 aa14.33□□□□□ -0.12
COL9A3-202ENST00000452372 PGPA6NDG6 321 aa14.33□□□□□ -0.12
COL9A3-202ENST00000452372 CXorf65A6NEN9 183 aa14.33□□□□□ -0.12
COL9A3-202ENST00000452372 CXorf1O96002 111 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms