RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 OR1L4Q8NGR5 311 aa8.82□□□□□ -1
CPSF4-208ENST00000452047 SLC39A9Q9NUM3 307 aa8.82□□□□□ -1
CPSF4-208ENST00000452047 PXMP4Q9Y6I8 212 aa8.82□□□□□ -1
CPSF4-208ENST00000452047 NACAE9PAV3 2078 aa8.82□□□□□ -1
CPSF4-208ENST00000452047 DNAH17Q9UFH2 4485 aa8.82□□□□□ -1
CPSF4-208ENST00000452047 TRAV5A0A0B4J249 113 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 RGS13O14921 159 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 TAS2R60P59551 318 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 HBG1P69891 147 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 HBG2P69892 147 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 BAXQ07812 192 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 KIR3DS1Q14943 382 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 TMEM88Q6PEY1 159 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 PFDN5Q99471 154 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 PPP1R14DQ9NXH3 145 aa8.81□□□□□ -1
CPSF4-208ENST00000452047 FGF7P21781 194 aa8.8□□□□□ -1
CPSF4-208ENST00000452047 CD300CQ08708 224 aa8.8□□□□□ -1
CPSF4-208ENST00000452047 GUK1Q16774 197 aa8.8□□□□□ -1
CPSF4-208ENST00000452047 ENKURQ8TC29 256 aa8.8□□□□□ -1
CPSF4-208ENST00000452047 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
CPSF4-208ENST00000452047 LINC01587Q99440 93 aa8.8□□□□□ -1
CPSF4-208ENST00000452047 PARD6GQ9BYG4 376 aaPredicted RBP8.8□□□□□ -1
CPSF4-208ENST00000452047 GPN1Q9HCN4 374 aaPredicted RBP8.8□□□□□ -1
CPSF4-208ENST00000452047 ZNF586Q9NXT0 402 aa8.8□□□□□ -1
CPSF4-208ENST00000452047 PKD1P98161 4303 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 ZNF253O75346 499 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 MPDU1O75352 247 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 FCN2Q15485 313 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 ATP6V1FQ16864 119 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 GFI1BQ5VTD9 330 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 OR10J6PQ8NGY7 276 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 C16orf74Q96GX8 76 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 C20orf144Q9BQM9 153 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 NPCDR1Q9BY65 106 aa8.79□□□□□ -1
CPSF4-208ENST00000452047 TRBV19A0A075B6N1 114 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 H0YIZ8 118 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 H7BYZ3 331 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 SIX6O95475 246 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 DEFB130BP0DP73 79 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 DEFB130AP0DP74 79 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 HTN1P15515 57 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 NHLH2Q02577 135 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 LGALS9BQ3B8N2 356 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 RNF212Q495C1 297 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 GCSAMLQ5JQS6 135 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 ZNF493Q6ZR52 646 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 LINC00336Q6ZUF6 198 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 C15orf53Q8NAA6 179 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 TMEM263Q8WUH6 116 aaKnown RBP8.78□□□□□ -1
CPSF4-208ENST00000452047 ODF3Q96PU9 254 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 NMES1Q9C002 83 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 OR5AC2Q9NZP5 309 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 TMEM14CQ9P0S9 112 aa8.78□□□□□ -1
CPSF4-208ENST00000452047 HERC2O95714 4834 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 A0A1B0GVY2 172 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 E5RGE8 158 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 M0R2N4 97 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 RTL8CO15255 209 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 PRAF2O60831 178 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 NDUFB4O95168 129 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 CT45A10P0DMU9 189 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 S100A1P23297 94 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 Q6ZR54 194 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 UBE2DNLQ8IWF7 75 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 OR5C1Q8NGR4 320 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 THAP6Q8TBB0 222 aa8.77□□□□□ -1.01
CPSF4-208ENST00000452047 MRPL53Q96EL3 112 aaKnown RBP8.77□□□□□ -1.01
CPSF4-208ENST00000452047 TIMM8BQ9Y5J9 83 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-208ENST00000452047 IGLV2-18A0A075B6J9 118 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 INMT-MINDY4F8WBC2 141 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 M0R3E3 92 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 ATP5G1P05496 136 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 PYYP10082 97 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 HIST1H1EP10412 219 aaKnown RBP8.76□□□□□ -1.01
CPSF4-208ENST00000452047 ATP5G3P48201 142 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 H2BFSP57053 126 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 PDE6HQ13956 83 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 ZFP69Q49AA0 526 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 LRRC37A5PQ49AS3 106 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 TCTE3Q8IZS6 198 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 LINC00612Q8N6U2 182 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 ST6GAL2Q96JF0 529 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 MARVELD1Q9BSK0 173 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 SLC25A31Q9H0C2 315 aa8.76□□□□□ -1.01
CPSF4-208ENST00000452047 CBY3A6NI87 242 aa8.75□□□□□ -1.01
CPSF4-208ENST00000452047 RLN2P04090 185 aa8.75□□□□□ -1.01
CPSF4-208ENST00000452047 FAM167A-AS1Q96KT0 104 aa8.75□□□□□ -1.01
CPSF4-208ENST00000452047 SLC25A2Q9BXI2 301 aa8.75□□□□□ -1.01
CPSF4-208ENST00000452047 NOP10Q9NPE3 64 aaKnown RBP8.75□□□□□ -1.01
CPSF4-208ENST00000452047 KIAA1109Q2LD37 5005 aa8.75□□□□□ -1.01
CPSF4-208ENST00000452047 TRAV12-3A0A0B4J271 114 aa8.74□□□□□ -1.01
CPSF4-208ENST00000452047 F5H768 121 aa8.74□□□□□ -1.01
CPSF4-208ENST00000452047 J3KRW8 73 aa8.74□□□□□ -1.01
CPSF4-208ENST00000452047 LEPP41159 167 aa8.74□□□□□ -1.01
CPSF4-208ENST00000452047 FAM3BP58499 235 aaPredicted RBP8.74□□□□□ -1.01
CPSF4-208ENST00000452047 CYCSP99999 105 aaKnown RBP8.74□□□□□ -1.01
CPSF4-208ENST00000452047 CLINT1Q14677 625 aa8.74□□□□□ -1.01
CPSF4-208ENST00000452047 PPP1R1CQ8WVI7 109 aa8.74□□□□□ -1.01
CPSF4-208ENST00000452047 FAM19A4Q96LR4 140 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms