RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SNRPCP09234 159 aaKnown RBP9.7□□□□□ -0.86
VPS33A-202ENST00000451053 RANP62826 216 aaKnown RBP9.7□□□□□ -0.86
VPS33A-202ENST00000451053 ICAM4Q14773 271 aa9.7□□□□□ -0.86
VPS33A-202ENST00000451053 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.7□□□□□ -0.86
VPS33A-202ENST00000451053 RXFP4Q8TDU9 374 aa9.7□□□□□ -0.86
VPS33A-202ENST00000451053 Q9H3A6 140 aa9.7□□□□□ -0.86
VPS33A-202ENST00000451053 MAP6D1Q9H9H5 199 aa9.7□□□□□ -0.86
VPS33A-202ENST00000451053 TREM1Q9NP99 234 aa9.7□□□□□ -0.86
VPS33A-202ENST00000451053 PRELID1Q9Y255 219 aa9.7□□□□□ -0.86
VPS33A-202ENST00000451053 YTHDF2Q9Y5A9 579 aaKnown RBP9.7□□□□□ -0.86
VPS33A-202ENST00000451053 NOTCH1P46531 2555 aa9.7□□□□□ -0.86
VPS33A-202ENST00000451053 H3BTX0 84 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 NDUFB4O95168 129 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 ZNF688P0C7X2 276 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 DEFB125Q8N687 156 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 ARL6IP6Q8N6S5 226 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 C5orf17Q8NAS9 161 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 MRAPQ8TCY5 172 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 RARRES2Q99969 163 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 ZNF331Q9NQX6 463 aaPredicted RBP9.69□□□□□ -0.86
VPS33A-202ENST00000451053 NBEAL1Q6ZS30 2694 aa9.69□□□□□ -0.86
VPS33A-202ENST00000451053 PGPA6NDG6 321 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 OR11H12B2RN74 326 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 GGTLC3B5MD39 225 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 TMEM250H0YL14 139 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 ISLRO14498 428 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 ID1P41134 155 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 CSN1S1P47710 185 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 ATP5G3P48201 142 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 DEFB131AP59861 70 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 SUMO1P63165 101 aaKnown RBP9.68□□□□□ -0.86
VPS33A-202ENST00000451053 ZNF124Q15973 351 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 APRG1Q8IVJ8 170 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 RPUSD4Q96CM3 377 aaKnown RBP9.68□□□□□ -0.86
VPS33A-202ENST00000451053 MRPL53Q96EL3 112 aaKnown RBP9.68□□□□□ -0.86
VPS33A-202ENST00000451053 C16orf92Q96LL3 132 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 CITED4Q96RK1 184 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
VPS33A-202ENST00000451053 SLC17A3O00476 420 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 SLC25A5P05141 298 aaKnown RBP9.67□□□□□ -0.86
VPS33A-202ENST00000451053 IGHV4-30-4P0DP06 118 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 PSMG4Q5JS54 123 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 IGFL4Q6B9Z1 124 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 CCDC28AQ8IWP9 274 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 SLC7A5P1Q8MH63 180 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 HIST1H2BAQ96A08 127 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 SLC35B3Q9H1N7 401 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 SRD5A3Q9H8P0 318 aa9.67□□□□□ -0.86
VPS33A-202ENST00000451053 TRAV8-2A0A0B4J237 113 aa9.66□□□□□ -0.86
VPS33A-202ENST00000451053 SERTM2A0A1B0GWG4 89 aa9.66□□□□□ -0.86
VPS33A-202ENST00000451053 K7EQM0 130 aa9.66□□□□□ -0.86
VPS33A-202ENST00000451053 CMC4P56277 68 aaPredicted RBP9.66□□□□□ -0.86
VPS33A-202ENST00000451053 SNRPD3P62318 126 aaKnown RBP9.66□□□□□ -0.86
VPS33A-202ENST00000451053 SRSF3P84103 164 aaKnown RBP9.66□□□□□ -0.86
VPS33A-202ENST00000451053 EXOC3-AS1Q8N2X6 119 aa9.66□□□□□ -0.86
VPS33A-202ENST00000451053 C11orf52Q96A22 123 aa9.66□□□□□ -0.86
VPS33A-202ENST00000451053 C20orf173Q96LM9 149 aa9.66□□□□□ -0.86
VPS33A-202ENST00000451053 LINC00052Q96N35 136 aa9.66□□□□□ -0.86
VPS33A-202ENST00000451053 ATG101Q9BSB4 218 aa9.66□□□□□ -0.86
VPS33A-202ENST00000451053 EPDR1Q9UM22 224 aa9.66□□□□□ -0.86
VPS33A-202ENST00000451053 PEX7O00628 323 aa9.65□□□□□ -0.86
VPS33A-202ENST00000451053 SRP19P09132 144 aaKnown RBP9.65□□□□□ -0.86
VPS33A-202ENST00000451053 HLA-DMBP28068 263 aa9.65□□□□□ -0.86
VPS33A-202ENST00000451053 DEFB1P60022 68 aa9.65□□□□□ -0.86
VPS33A-202ENST00000451053 RNF182Q8N6D2 247 aa9.65□□□□□ -0.86
VPS33A-202ENST00000451053 TUBA4BQ9H853 241 aa9.65□□□□□ -0.86
VPS33A-202ENST00000451053 TMEM218A2RU14 115 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 FBLL1A6NHQ2 334 aaKnown RBP9.64□□□□□ -0.87
VPS33A-202ENST00000451053 KNCNA6PVL3 124 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 A8MZ25 164 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 TCRAP04437 139 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 S100A9P06702 114 aaKnown RBP9.64□□□□□ -0.87
VPS33A-202ENST00000451053 SFTA3P0C7M3 94 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 FRMD6-AS1P0C7T7 363 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 AKR1C3P42330 323 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 CNN1P51911 297 aaKnown RBP9.64□□□□□ -0.87
VPS33A-202ENST00000451053 PSG3Q16557 428 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 FAM74A3Q4VXF1 159 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 SOHLH1Q5JUK2 328 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 CYB561D1Q8N8Q1 229 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 FBN3Q75N90 2809 aa9.64□□□□□ -0.87
VPS33A-202ENST00000451053 SCO2A0A1W2PP80 73 aa9.63□□□□□ -0.87
VPS33A-202ENST00000451053 RBMY1BA6NDE4 496 aaKnown RBP9.63□□□□□ -0.87
VPS33A-202ENST00000451053 RBMY1EA6NEQ0 496 aaKnown RBP9.63□□□□□ -0.87
VPS33A-202ENST00000451053 KRBOX1C9JBD0 128 aa9.63□□□□□ -0.87
VPS33A-202ENST00000451053 RBMY1DP0C7P1 496 aaKnown RBP9.63□□□□□ -0.87
VPS33A-202ENST00000451053 PRB4P10163 310 aaPredicted RBP9.63□□□□□ -0.87
VPS33A-202ENST00000451053 CEBPGP53567 150 aa9.63□□□□□ -0.87
VPS33A-202ENST00000451053 ZNF738Q8NE65 137 aa9.63□□□□□ -0.87
VPS33A-202ENST00000451053 RPH3ALQ9UNE2 315 aa9.63□□□□□ -0.87
VPS33A-202ENST00000451053 DIRC3C9JPN6 131 aa9.62□□□□□ -0.87
VPS33A-202ENST00000451053 C9JQL5 133 aa9.62□□□□□ -0.87
VPS33A-202ENST00000451053 M0R3E3 92 aa9.62□□□□□ -0.87
VPS33A-202ENST00000451053 UBE2G1P62253 170 aa9.62□□□□□ -0.87
VPS33A-202ENST00000451053 ACTL10Q5JWF8 245 aa9.62□□□□□ -0.87
VPS33A-202ENST00000451053 GDF5OSQ5U4N7 250 aa9.62□□□□□ -0.87
VPS33A-202ENST00000451053 LINC00322Q6ZN03 302 aaPredicted RBP9.62□□□□□ -0.87
VPS33A-202ENST00000451053 C2CD4CQ8TF44 421 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms