RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 DEFB130BP0DP73 79 aa10.84□□□□□ -0.67
CHD3-205ENST00000449744 DEFB130AP0DP74 79 aa10.84□□□□□ -0.67
CHD3-205ENST00000449744 AZU1P20160 251 aa10.84□□□□□ -0.67
CHD3-205ENST00000449744 CYCSP99999 105 aaKnown RBP10.84□□□□□ -0.67
CHD3-205ENST00000449744 SAT2Q96F10 170 aaPredicted RBP10.84□□□□□ -0.67
CHD3-205ENST00000449744 NMES1Q9C002 83 aa10.84□□□□□ -0.67
CHD3-205ENST00000449744 VPS13DQ5THJ4 4388 aa10.84□□□□□ -0.67
CHD3-205ENST00000449744 PRAC2D3DTV9 90 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 DEFA1P59665 94 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 DEFA3P59666 94 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 IFITM3Q01628 133 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 NHLH2Q02577 135 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 OR5C1Q8NGR4 320 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 C16orf74Q96GX8 76 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 C20orf144Q9BQM9 153 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 NPCDR1Q9BY65 106 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 ZNF586Q9NXT0 402 aa10.83□□□□□ -0.68
CHD3-205ENST00000449744 H7BYZ3 331 aa10.82□□□□□ -0.68
CHD3-205ENST00000449744 ZNF253O75346 499 aa10.82□□□□□ -0.68
CHD3-205ENST00000449744 TMEM88Q6PEY1 159 aa10.82□□□□□ -0.68
CHD3-205ENST00000449744 THAP6Q8TBB0 222 aa10.82□□□□□ -0.68
CHD3-205ENST00000449744 PARD6GQ9BYG4 376 aaPredicted RBP10.82□□□□□ -0.68
CHD3-205ENST00000449744 KRTAP17-1Q9BYP8 105 aa10.82□□□□□ -0.68
CHD3-205ENST00000449744 OR5AC2Q9NZP5 309 aa10.82□□□□□ -0.68
CHD3-205ENST00000449744 TMEM14CQ9P0S9 112 aa10.82□□□□□ -0.68
CHD3-205ENST00000449744 TIMM9Q9Y5J7 89 aa10.82□□□□□ -0.68
CHD3-205ENST00000449744 KMT2AQ03164 3969 aa10.81□□□□□ -0.68
CHD3-205ENST00000449744 TRBV19A0A075B6N1 114 aa10.81□□□□□ -0.68
CHD3-205ENST00000449744 LEPP41159 167 aa10.81□□□□□ -0.68
CHD3-205ENST00000449744 CLINT1Q14677 625 aa10.81□□□□□ -0.68
CHD3-205ENST00000449744 FCN2Q15485 313 aa10.81□□□□□ -0.68
CHD3-205ENST00000449744 ZNF493Q6ZR52 646 aa10.81□□□□□ -0.68
CHD3-205ENST00000449744 CCDC28AQ8IWP9 274 aa10.81□□□□□ -0.68
CHD3-205ENST00000449744 KCNIP2Q9NS61 270 aa10.81□□□□□ -0.68
CHD3-205ENST00000449744 TIMM8BQ9Y5J9 83 aaPredicted RBP10.81□□□□□ -0.68
CHD3-205ENST00000449744 PLAC8L1A1L4L8 177 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 NPIPB6E9PJ23 425 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 F5H768 121 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 J3KRW8 73 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 SSNA1O43805 119 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 ATP5G1P05496 136 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 HIST1H1EP10412 219 aaKnown RBP10.8□□□□□ -0.68
CHD3-205ENST00000449744 ATP5G3P48201 142 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 GFI1BQ5VTD9 330 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 C15orf53Q8NAA6 179 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 TMEM263Q8WUH6 116 aaKnown RBP10.8□□□□□ -0.68
CHD3-205ENST00000449744 MRPL53Q96EL3 112 aaKnown RBP10.8□□□□□ -0.68
CHD3-205ENST00000449744 MARVELD1Q9BSK0 173 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 PRELID1Q9Y255 219 aa10.8□□□□□ -0.68
CHD3-205ENST00000449744 CBY3A6NI87 242 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 C17orf112F2Z3M2 114 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 H0YIZ8 118 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 M0R2N4 97 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 PET100P0DJ07 73 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 CT45A10P0DMU9 189 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 PYYP10082 97 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 PDE6HQ13956 83 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 KIR3DS1Q14943 382 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 GCSAMLQ5JQS6 135 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 LINC00336Q6ZUF6 198 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 BLNKQ8WV28 456 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 ODF3Q96PU9 254 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 WDR61Q9GZS3 305 aaKnown RBP10.79□□□□□ -0.68
CHD3-205ENST00000449744 AAMDCQ9H7C9 122 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 DNAH10Q8IVF4 4471 aa10.79□□□□□ -0.68
CHD3-205ENST00000449744 M0R3E3 92 aa10.78□□□□□ -0.68
CHD3-205ENST00000449744 RNF212Q495C1 297 aa10.78□□□□□ -0.68
CHD3-205ENST00000449744 RNASE8Q8TDE3 154 aaKnown RBP10.78□□□□□ -0.68
CHD3-205ENST00000449744 PPP1R1CQ8WVI7 109 aa10.78□□□□□ -0.68
CHD3-205ENST00000449744 NOP10Q9NPE3 64 aaKnown RBP10.78□□□□□ -0.68
CHD3-205ENST00000449744 IGLV2-18A0A075B6J9 118 aa10.77□□□□□ -0.69
CHD3-205ENST00000449744 TRAV12-3A0A0B4J271 114 aa10.77□□□□□ -0.69
CHD3-205ENST00000449744 NDUFB4O95168 129 aa10.77□□□□□ -0.69
CHD3-205ENST00000449744 H2BFSP57053 126 aa10.77□□□□□ -0.69
CHD3-205ENST00000449744 MIR17HGQ75NE6 70 aa10.77□□□□□ -0.69
CHD3-205ENST00000449744 ATG101Q9BSB4 218 aa10.77□□□□□ -0.69
CHD3-205ENST00000449744 SLC25A2Q9BXI2 301 aa10.77□□□□□ -0.69
CHD3-205ENST00000449744 MRPL32Q9BYC8 188 aaKnown RBP10.77□□□□□ -0.69
CHD3-205ENST00000449744 OR51M1Q9H341 326 aa10.77□□□□□ -0.69
CHD3-205ENST00000449744 SNURFLB1AK76 121 aa10.76□□□□□ -0.69
CHD3-205ENST00000449744 SLC25A5P05141 298 aaKnown RBP10.76□□□□□ -0.69
CHD3-205ENST00000449744 ERCC8Q13216 396 aa10.76□□□□□ -0.69
CHD3-205ENST00000449744 LGALS9BQ3B8N2 356 aa10.76□□□□□ -0.69
CHD3-205ENST00000449744 EXOC3-AS1Q8N2X6 119 aa10.76□□□□□ -0.69
CHD3-205ENST00000449744 LINC00477Q96M19 166 aa10.76□□□□□ -0.69
CHD3-205ENST00000449744 ATP5SQ99766 215 aa10.76□□□□□ -0.69
CHD3-205ENST00000449744 PYGO2Q9BRQ0 406 aa10.76□□□□□ -0.69
CHD3-205ENST00000449744 MPC2O95563 127 aa10.75□□□□□ -0.69
CHD3-205ENST00000449744 NUDT3O95989 172 aa10.75□□□□□ -0.69
CHD3-205ENST00000449744 NBEAP1P0C6P0 100 aa10.75□□□□□ -0.69
CHD3-205ENST00000449744 ICAM4Q14773 271 aa10.75□□□□□ -0.69
CHD3-205ENST00000449744 SCGB1C1Q8TD33 95 aa10.75□□□□□ -0.69
CHD3-205ENST00000449744 FAM167A-AS1Q96KT0 104 aa10.75□□□□□ -0.69
CHD3-205ENST00000449744 PAXXQ9BUH6 204 aa10.75□□□□□ -0.69
CHD3-205ENST00000449744 FUT9Q9Y231 359 aa10.75□□□□□ -0.69
CHD3-205ENST00000449744 HSPB11Q9Y547 144 aa10.75□□□□□ -0.69
CHD3-205ENST00000449744 C7orf71A4D174 169 aa10.74□□□□□ -0.69
CHD3-205ENST00000449744 IFNA5P01569 189 aa10.74□□□□□ -0.69
CHD3-205ENST00000449744 OR10J4P0C629 311 aa10.74□□□□□ -0.69
CHD3-205ENST00000449744 FAM122CQ6P4D5 195 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms