RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MOB3BQ86TA1 216 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 PRSS22Q9GZN4 317 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 HCFC1P51610 2035 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 IGLV3-9A0A075B6K5 115 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 COL8A1P27658 744 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 FXYD7P58549 80 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 SPRNQ5BIV9 151 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 CUL9Q8IWT3 2517 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 CT45A10P0DMU9 189 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 CGB3P0DN86 165 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 CGB7P0DN87 165 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 ZNF134P52741 427 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 NPIPB3Q92617 1050 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 SLC25A2Q9BXI2 301 aa10.71□□□□□ -0.69
SYNGAP1-204ENST00000449372 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.7
SYNGAP1-204ENST00000449372 IGKV1OR2-108A0A075B7D4 117 aa10.71□□□□□ -0.7
SYNGAP1-204ENST00000449372 IGKV2D-26A0A0A0MRZ7 120 aa10.71□□□□□ -0.7
SYNGAP1-204ENST00000449372 PRRG2O14669 202 aa10.71□□□□□ -0.7
SYNGAP1-204ENST00000449372 DEFB108BQ8NET1 73 aa10.71□□□□□ -0.7
SYNGAP1-204ENST00000449372 NDUFA4L2Q9NRX3 87 aa10.71□□□□□ -0.7
SYNGAP1-204ENST00000449372 DKK2Q9UBU2 259 aa10.71□□□□□ -0.7
SYNGAP1-204ENST00000449372 HAX1O00165 279 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 TFF1P04155 84 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 PLGLAQ15195 96 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 LINC00305Q7Z4B0 112 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 FAM167A-AS1Q96KT0 104 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 LINC00574Q9H8X3 128 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 TET2Q6N021 2002 aaPredicted RBP10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 IFI27L1Q96BM0 104 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 TRGV9Q99603 122 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 KALRNO60229 2985 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 CCDC179H3BU77 68 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 LHBP01229 141 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 LEAP2Q969E1 77 aa10.7□□□□□ -0.7
SYNGAP1-204ENST00000449372 FABP5P3A8MUU1 101 aa10.69□□□□□ -0.7
SYNGAP1-204ENST00000449372 NDUFB3O43676 98 aa10.69□□□□□ -0.7
SYNGAP1-204ENST00000449372 RRN3P1Q2M238 152 aa10.69□□□□□ -0.7
SYNGAP1-204ENST00000449372 MOSP00540 346 aa10.69□□□□□ -0.7
SYNGAP1-204ENST00000449372 ORM2P19652 201 aa10.69□□□□□ -0.7
SYNGAP1-204ENST00000449372 HIGD1AQ9Y241 93 aa10.69□□□□□ -0.7
SYNGAP1-204ENST00000449372 C5orf47Q569G3 176 aa10.69□□□□□ -0.7
SYNGAP1-204ENST00000449372 ZNF833PQ6ZTB9 187 aa10.69□□□□□ -0.7
SYNGAP1-204ENST00000449372 OTORQ9NRC9 128 aa10.69□□□□□ -0.7
SYNGAP1-204ENST00000449372 TRBV20-1A0A075B6N2 111 aa10.68□□□□□ -0.7
SYNGAP1-204ENST00000449372 A4D1N5 150 aa10.68□□□□□ -0.7
SYNGAP1-204ENST00000449372 ADIPOQQ15848 244 aa10.68□□□□□ -0.7
SYNGAP1-204ENST00000449372 CCL13Q99616 98 aa10.68□□□□□ -0.7
SYNGAP1-204ENST00000449372 A0A0G2JNJ9 132 aa10.68□□□□□ -0.7
SYNGAP1-204ENST00000449372 CFAP126Q5VTH2 177 aa10.68□□□□□ -0.7
SYNGAP1-204ENST00000449372 OR5AN1Q8NGI8 311 aa10.68□□□□□ -0.7
SYNGAP1-204ENST00000449372 MLST8Q9BVC4 326 aa10.68□□□□□ -0.7
SYNGAP1-204ENST00000449372 Q9UFV3 132 aa10.68□□□□□ -0.7
SYNGAP1-204ENST00000449372 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 SRRM4A7MD48 611 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 K7ENP7 123 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 SMCPP49901 116 aaPredicted RBP10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 FAM27E3Q08E93 113 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 WFDC3Q8IUB2 231 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 ZCCHC24Q8N2G6 241 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 C8orf31Q8N9H6 132 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 KLF12Q9Y4X4 402 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 RBP4P02753 201 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 FCER1GP30273 86 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 RPL27AP46776 148 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 DIAPH2-AS1Q14236 149 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 A0A1B0GUT8 65 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 HBDP02042 147 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 PRTN3P24158 256 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 TTC32Q5I0X7 151 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 SCNM1Q9BWG6 230 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 MRPL20Q9BYC9 149 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 NGBQ9NPG2 151 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 DSCAML1Q8TD84 2053 aa10.67□□□□□ -0.7
SYNGAP1-204ENST00000449372 DYSFO75923 2080 aa10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 A0A087WX48 190 aa10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 RND1Q92730 232 aa10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 GAFA1Q96PS6 74 aa10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 NDUFV3P56181 108 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 SRSF1Q07955 248 aaKnown RBP eCLIP10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 PPDPFLQ8WWR9 84 aa10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 PTH2Q96A98 100 aa10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 UBTD1Q9HAC8 227 aa10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 RAI1Q7Z5J4 1906 aaPredicted RBP10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 MLANAQ16655 118 aa10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 LINC00311Q8N616 119 aa10.66□□□□□ -0.7
SYNGAP1-204ENST00000449372 SVILO95425 2214 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 ENSAO43768 121 aaKnown RBP10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 PIFOQ8TCI5 191 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 FXYD5Q96DB9 178 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 KIR2DL4Q99706 377 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 VPREB3Q9UKI3 123 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 RP1L1Q8IWN7 2480 aaPredicted RBP10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 ADGRG4Q8IZF6 3080 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 NDUFS7O75251 213 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 ARMS2P0C7Q2 107 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 C8orf46Q8TAG6 207 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 FOXC1Q12948 553 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 GAGE2BQ13066 116 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 GAGE2EQ4V326 116 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms