RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 BCL2P10415 239 aa10.89□□□□□ -0.67
SHANK2-210ENST00000449116 TAGLN2P37802 199 aaKnown RBP10.89□□□□□ -0.67
SHANK2-210ENST00000449116 SUMO1P63165 101 aaKnown RBP10.89□□□□□ -0.67
SHANK2-210ENST00000449116 KPRPQ5T749 579 aaPredicted RBP10.89□□□□□ -0.67
SHANK2-210ENST00000449116 CMTM2Q8TAZ6 248 aa10.89□□□□□ -0.67
SHANK2-210ENST00000449116 RXFP4Q8TDU9 374 aa10.89□□□□□ -0.67
SHANK2-210ENST00000449116 PRR25Q96S07 402 aa10.89□□□□□ -0.67
SHANK2-210ENST00000449116 C19orf73Q9NVV2 129 aa10.89□□□□□ -0.67
SHANK2-210ENST00000449116 ZNF705FA8MVS1 300 aaPredicted RBP10.88□□□□□ -0.67
SHANK2-210ENST00000449116 SLC25A5P05141 298 aaKnown RBP10.88□□□□□ -0.67
SHANK2-210ENST00000449116 CSN1S1P47710 185 aa10.88□□□□□ -0.67
SHANK2-210ENST00000449116 HAGHQ16775 308 aa10.88□□□□□ -0.67
SHANK2-210ENST00000449116 C5orf17Q8NAS9 161 aa10.88□□□□□ -0.67
SHANK2-210ENST00000449116 DNAH3Q8TD57 4116 aa10.88□□□□□ -0.67
SHANK2-210ENST00000449116 RPUSD4Q96CM3 377 aaKnown RBP10.88□□□□□ -0.67
SHANK2-210ENST00000449116 TXNDC17Q9BRA2 123 aa10.88□□□□□ -0.67
SHANK2-210ENST00000449116 LOC102723971A0A1B0GUV8 181 aa10.87□□□□□ -0.67
SHANK2-210ENST00000449116 C11orf94C9JXX5 98 aa10.87□□□□□ -0.67
SHANK2-210ENST00000449116 ATP5G3P48201 142 aa10.87□□□□□ -0.67
SHANK2-210ENST00000449116 FOXI2Q6ZQN5 318 aa10.87□□□□□ -0.67
SHANK2-210ENST00000449116 APRG1Q8IVJ8 170 aa10.87□□□□□ -0.67
SHANK2-210ENST00000449116 CCDC28AQ8IWP9 274 aa10.87□□□□□ -0.67
SHANK2-210ENST00000449116 ARL6IP6Q8N6S5 226 aa10.87□□□□□ -0.67
SHANK2-210ENST00000449116 FAM210AQ96ND0 272 aa10.87□□□□□ -0.67
SHANK2-210ENST00000449116 TCEAL7Q9BRU2 100 aa10.87□□□□□ -0.67
SHANK2-210ENST00000449116 RBFOX3A6NFN3 312 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 DIRC3C9JPN6 131 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 PRAC2D3DTV9 90 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 DEFB1P60022 68 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 GNG5P63218 68 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 MEF2BQ02080 365 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-210ENST00000449116 EBLN2Q6P2I7 272 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 Q8N1Y9 231 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 WFDC10AQ9H1F0 79 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 SAV1Q9H4B6 383 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-210ENST00000449116 VAX2Q9UIW0 290 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 EPDR1Q9UM22 224 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 RPH3ALQ9UNE2 315 aa10.86□□□□□ -0.67
SHANK2-210ENST00000449116 F6UB75 175 aa10.85□□□□□ -0.67
SHANK2-210ENST00000449116 TCRAP04437 139 aa10.85□□□□□ -0.67
SHANK2-210ENST00000449116 PRB4P10163 310 aaPredicted RBP10.85□□□□□ -0.67
SHANK2-210ENST00000449116 ZNF124Q15973 351 aa10.85□□□□□ -0.67
SHANK2-210ENST00000449116 TOR2AQ5JU69 321 aa10.85□□□□□ -0.67
SHANK2-210ENST00000449116 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
SHANK2-210ENST00000449116 OR8A1Q8NGG7 326 aa10.85□□□□□ -0.67
SHANK2-210ENST00000449116 HIST1H2BAQ96A08 127 aa10.85□□□□□ -0.67
SHANK2-210ENST00000449116 RARRES2Q99969 163 aa10.85□□□□□ -0.67
SHANK2-210ENST00000449116 A0A0J9YX75 114 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 SERTM2A0A1B0GWG4 89 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 KNCNA6PVL3 124 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 F6UZH7 168 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 HLA-DRB4P13762 266 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 HIST1H1AQ02539 215 aaPredicted RBP10.84□□□□□ -0.67
SHANK2-210ENST00000449116 ACTL10Q5JWF8 245 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 GDF5OSQ5U4N7 250 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 DEFB125Q8N687 156 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 OR10J6PQ8NGY7 276 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 ATG101Q9BSB4 218 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 EIF5A2Q9GZV4 153 aaKnown RBP10.84□□□□□ -0.67
SHANK2-210ENST00000449116 HLA-DRB4X5D2U9 266 aa10.84□□□□□ -0.67
SHANK2-210ENST00000449116 IGKV2-40A0A087WW87 121 aaPredicted RBP10.83□□□□□ -0.68
SHANK2-210ENST00000449116 RBAKDNA6NC62 111 aa10.83□□□□□ -0.68
SHANK2-210ENST00000449116 K7EQM0 130 aa10.83□□□□□ -0.68
SHANK2-210ENST00000449116 PEX7O00628 323 aa10.83□□□□□ -0.68
SHANK2-210ENST00000449116 PDE6DO43924 150 aa10.83□□□□□ -0.68
SHANK2-210ENST00000449116 DUSP14O95147 198 aaKnown RBP10.83□□□□□ -0.68
SHANK2-210ENST00000449116 IGKV2D-40P01614 121 aaPredicted RBP10.83□□□□□ -0.68
SHANK2-210ENST00000449116 GOLT1AQ6ZVE7 132 aa10.83□□□□□ -0.68
SHANK2-210ENST00000449116 CYB561D1Q8N8Q1 229 aa10.83□□□□□ -0.68
SHANK2-210ENST00000449116 CITED4Q96RK1 184 aa10.83□□□□□ -0.68
SHANK2-210ENST00000449116 SCO2A0A1W2PP80 73 aa10.82□□□□□ -0.68
SHANK2-210ENST00000449116 H3BMM0 161 aa10.82□□□□□ -0.68
SHANK2-210ENST00000449116 ZNF705DP0CH99 300 aaPredicted RBP10.82□□□□□ -0.68
SHANK2-210ENST00000449116 ZNF705BP0CI00 300 aaPredicted RBP10.82□□□□□ -0.68
SHANK2-210ENST00000449116 CNN1P51911 297 aaKnown RBP10.82□□□□□ -0.68
SHANK2-210ENST00000449116 STHQ8IWL8 128 aa10.82□□□□□ -0.68
SHANK2-210ENST00000449116 SRD5A3Q9H8P0 318 aa10.82□□□□□ -0.68
SHANK2-210ENST00000449116 MED9Q9NWA0 146 aa10.82□□□□□ -0.68
SHANK2-210ENST00000449116 AURKAIP1Q9NWT8 199 aaPredicted RBP10.82□□□□□ -0.68
SHANK2-210ENST00000449116 NPIPB6E9PJ23 425 aa10.81□□□□□ -0.68
SHANK2-210ENST00000449116 NDUFS6O75380 124 aaKnown RBP10.81□□□□□ -0.68
SHANK2-210ENST00000449116 AKR1C3P42330 323 aa10.81□□□□□ -0.68
SHANK2-210ENST00000449116 PEA15Q15121 130 aa10.81□□□□□ -0.68
SHANK2-210ENST00000449116 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
SHANK2-210ENST00000449116 TMEM75Q8N9X5 138 aa10.81□□□□□ -0.68
SHANK2-210ENST00000449116 OR4B1Q8NGF8 309 aa10.81□□□□□ -0.68
SHANK2-210ENST00000449116 C11orf52Q96A22 123 aa10.81□□□□□ -0.68
SHANK2-210ENST00000449116 VGLL1Q99990 258 aa10.81□□□□□ -0.68
SHANK2-210ENST00000449116 NOTCH1P46531 2555 aa10.8□□□□□ -0.68
SHANK2-210ENST00000449116 RAB19A4D1S5 217 aa10.8□□□□□ -0.68
SHANK2-210ENST00000449116 PRB2P02812 416 aaPredicted RBP10.8□□□□□ -0.68
SHANK2-210ENST00000449116 IGHV4-30-4P0DP06 118 aa10.8□□□□□ -0.68
SHANK2-210ENST00000449116 ERCC8Q13216 396 aa10.8□□□□□ -0.68
SHANK2-210ENST00000449116 TMEM78Q5T7P6 136 aa10.8□□□□□ -0.68
SHANK2-210ENST00000449116 TRPT1Q86TN4 253 aaKnown RBP10.8□□□□□ -0.68
SHANK2-210ENST00000449116 C2CD4CQ8TF44 421 aa10.8□□□□□ -0.68
SHANK2-210ENST00000449116 LINC00477Q96M19 166 aa10.8□□□□□ -0.68
SHANK2-210ENST00000449116 AGPAT4-IT1Q9H0P7 198 aa10.8□□□□□ -0.68
SHANK2-210ENST00000449116 SMDT1Q9H4I9 107 aa10.8□□□□□ -0.68
SHANK2-210ENST00000449116 TUBA4BQ9H853 241 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms