RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ST6GAL2Q96JF0 529 aa10.24□□□□□ -0.77
GTF3C3-206ENST00000448539 PRELID1Q9Y255 219 aa10.24□□□□□ -0.77
GTF3C3-206ENST00000448539 AGRNO00468 2067 aa10.24□□□□□ -0.77
GTF3C3-206ENST00000448539 ZNF705FA8MVS1 300 aaPredicted RBP10.23□□□□□ -0.77
GTF3C3-206ENST00000448539 AMBPP02760 352 aa10.23□□□□□ -0.77
GTF3C3-206ENST00000448539 AKAP14Q86UN6 197 aa10.23□□□□□ -0.77
GTF3C3-206ENST00000448539 TCTE3Q8IZS6 198 aa10.23□□□□□ -0.77
GTF3C3-206ENST00000448539 FXYD5Q96DB9 178 aa10.23□□□□□ -0.77
GTF3C3-206ENST00000448539 MRPL53Q96EL3 112 aaKnown RBP10.23□□□□□ -0.77
GTF3C3-206ENST00000448539 EDA2RQ9HAV5 297 aa10.23□□□□□ -0.77
GTF3C3-206ENST00000448539 PFDN1O60925 122 aa10.22□□□□□ -0.77
GTF3C3-206ENST00000448539 NDUFB4O95168 129 aa10.22□□□□□ -0.77
GTF3C3-206ENST00000448539 AKR1C8PQ5T2L2 129 aa10.22□□□□□ -0.77
GTF3C3-206ENST00000448539 ACTR3CQ9C0K3 210 aaPredicted RBP10.22□□□□□ -0.77
GTF3C3-206ENST00000448539 SLC35B3Q9H1N7 401 aa10.22□□□□□ -0.77
GTF3C3-206ENST00000448539 CYTL1Q9NRR1 136 aa10.22□□□□□ -0.77
GTF3C3-206ENST00000448539 A0A0J9YWU9 116 aa10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 A8MTW9 85 aa10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 HMGB3O15347 200 aaKnown RBP10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 BCL2L11O43521 198 aa10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 EIF3GO75821 320 aaKnown RBP eCLIP10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 PRB4P10163 310 aaPredicted RBP10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 EIF5AP63241 154 aaKnown RBP10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 ICAM4Q14773 271 aa10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 EXOC3-AS1Q8N2X6 119 aa10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 RPP25LQ8N5L8 163 aaKnown RBP10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 IL17DQ8TAD2 202 aa10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 MUC7Q8TAX7 377 aa10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 ZNF471Q9BX82 626 aaPredicted RBP10.21□□□□□ -0.77
GTF3C3-206ENST00000448539 BOLA2-SMG1P6H3BVE0 249 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 CSN1S1P47710 185 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 RANP62826 216 aaKnown RBP10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 SPINK13Q1W4C9 94 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 AMTNQ6UX39 209 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 TMUB2Q71RG4 321 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 LYPD1Q8N2G4 141 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 CSNK1G2-AS1Q8NCQ2 148 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 RAB24Q969Q5 203 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 ZNF503Q96F45 646 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 PHYHIPLQ96FC7 376 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 GOLT1BQ9Y3E0 138 aa10.2□□□□□ -0.78
GTF3C3-206ENST00000448539 IGHV3OR16-12A0A075B7B8 117 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 PRAC2D3DTV9 90 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 C3orf84H3BNL1 204 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 M0R2Z0 102 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 M0R3E3 92 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 INSP01308 110 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 C1QBP02746 253 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 STAG3L2P0CL84 134 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 STAG3L3P0CL85 134 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 ARL14EPLP0DKL9 152 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 MIFP14174 115 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 FAM74A1Q5RGS3 127 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 TMEM208Q9BTX3 173 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 Q9H3A6 140 aa10.19□□□□□ -0.78
GTF3C3-206ENST00000448539 ZNF705EA8MWA4 302 aaPredicted RBP10.18□□□□□ -0.78
GTF3C3-206ENST00000448539 CXorf1O96002 111 aa10.18□□□□□ -0.78
GTF3C3-206ENST00000448539 TSPOP30536 169 aa10.18□□□□□ -0.78
GTF3C3-206ENST00000448539 IQCF2Q8IXL9 164 aa10.18□□□□□ -0.78
GTF3C3-206ENST00000448539 CMTM2Q8TAZ6 248 aa10.18□□□□□ -0.78
GTF3C3-206ENST00000448539 HYLS1Q96M11 299 aa10.18□□□□□ -0.78
GTF3C3-206ENST00000448539 IGF2BP2-AS1Q96M15 143 aa10.18□□□□□ -0.78
GTF3C3-206ENST00000448539 C11orf68Q9H3H3 251 aaKnown RBP10.18□□□□□ -0.78
GTF3C3-206ENST00000448539 DNAH7Q8WXX0 4024 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 DEFB4AO15263 64 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 GCHFRP30047 84 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 LEPP41159 167 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 CDKN1BP46527 198 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 RXFP4Q8TDU9 374 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 LINC00477Q96M19 166 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 OTORQ9NRC9 128 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 TMEM167BQ9NRX6 74 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 X6R8D5 127 aa10.17□□□□□ -0.78
GTF3C3-206ENST00000448539 TRAV12-2A0A075B6T6 113 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 IGHV4-28A0A0C4DH34 117 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 CTXND1A0A1B0GTU2 59 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 PGPA6NDG6 321 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 SMIM9A6NGZ8 99 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 NPIPB6E9PJ23 425 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 SEC11BP0C7V7 166 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 TPT1P13693 172 aaKnown RBP10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 ERCC8Q13216 396 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 TMEM78Q5T7P6 136 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 ZNF705AQ6ZN79 300 aaPredicted RBP10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 BAP18Q8IXM2 172 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 Q8NAQ8 132 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 ODF3Q96PU9 254 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 NEU1Q99519 415 aa10.16□□□□□ -0.78
GTF3C3-206ENST00000448539 IGKV2-40A0A087WW87 121 aaPredicted RBP10.15□□□□□ -0.78
GTF3C3-206ENST00000448539 UMAD1C9J7I0 102 aa10.15□□□□□ -0.78
GTF3C3-206ENST00000448539 IGKV2D-40P01614 121 aaPredicted RBP10.15□□□□□ -0.78
GTF3C3-206ENST00000448539 HBE1P02100 147 aa10.15□□□□□ -0.78
GTF3C3-206ENST00000448539 ZFP69Q49AA0 526 aa10.15□□□□□ -0.78
GTF3C3-206ENST00000448539 ZFAND6Q6FIF0 208 aa10.15□□□□□ -0.78
GTF3C3-206ENST00000448539 C1orf158Q8N1D5 194 aa10.15□□□□□ -0.78
GTF3C3-206ENST00000448539 STAB2Q8WWQ8 2551 aa10.15□□□□□ -0.79
GTF3C3-206ENST00000448539 A0A1B0GVG6 124 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 J3KRW8 73 aa10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 CRXO43186 299 aaPredicted RBP10.14□□□□□ -0.79
GTF3C3-206ENST00000448539 CT45A10P0DMU9 189 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms