RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 C16orf74Q96GX8 76 aa13.96□□□□□ -0.17
VCP-203ENST00000448530 SLC25A31Q9H0C2 315 aa13.96□□□□□ -0.17
VCP-203ENST00000448530 SIX6O95475 246 aa13.95□□□□□ -0.18
VCP-203ENST00000448530 C20orf144Q9BQM9 153 aa13.95□□□□□ -0.18
VCP-203ENST00000448530 PTTG2Q9NZH5 202 aa13.95□□□□□ -0.18
VCP-203ENST00000448530 PRAC2D3DTV9 90 aa13.94□□□□□ -0.18
VCP-203ENST00000448530 E5RGE8 158 aa13.94□□□□□ -0.18
VCP-203ENST00000448530 H7BYZ3 331 aa13.94□□□□□ -0.18
VCP-203ENST00000448530 CYCSP99999 105 aaKnown RBP13.94□□□□□ -0.18
VCP-203ENST00000448530 LRRC37A5PQ49AS3 106 aa13.94□□□□□ -0.18
VCP-203ENST00000448530 ZNF493Q6ZR52 646 aa13.94□□□□□ -0.18
VCP-203ENST00000448530 LINC00336Q6ZUF6 198 aa13.94□□□□□ -0.18
VCP-203ENST00000448530 C15orf53Q8NAA6 179 aa13.94□□□□□ -0.18
VCP-203ENST00000448530 NMES1Q9C002 83 aa13.94□□□□□ -0.18
VCP-203ENST00000448530 TIMM8BQ9Y5J9 83 aaPredicted RBP13.94□□□□□ -0.18
VCP-203ENST00000448530 A6NHS1 94 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 INMT-MINDY4F8WBC2 141 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 M0R2N4 97 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 ZNF253O75346 499 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 LEPP41159 167 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 NHLH2Q02577 135 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 RNF212Q495C1 297 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 CCDC28AQ8IWP9 274 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 OR5C1Q8NGR4 320 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 NPCDR1Q9BY65 106 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 ZNF586Q9NXT0 402 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 TIMM9Q9Y5J7 89 aa13.93□□□□□ -0.18
VCP-203ENST00000448530 PLAC8L1A1L4L8 177 aa13.92□□□□□ -0.18
VCP-203ENST00000448530 F5H768 121 aa13.92□□□□□ -0.18
VCP-203ENST00000448530 ATP5G1P05496 136 aa13.92□□□□□ -0.18
VCP-203ENST00000448530 ATP5G3P48201 142 aa13.92□□□□□ -0.18
VCP-203ENST00000448530 FCN2Q15485 313 aa13.92□□□□□ -0.18
VCP-203ENST00000448530 THAP6Q8TBB0 222 aa13.92□□□□□ -0.18
VCP-203ENST00000448530 TMEM263Q8WUH6 116 aaKnown RBP13.92□□□□□ -0.18
VCP-203ENST00000448530 PARD6GQ9BYG4 376 aaPredicted RBP13.92□□□□□ -0.18
VCP-203ENST00000448530 TMEM14CQ9P0S9 112 aa13.92□□□□□ -0.18
VCP-203ENST00000448530 TRBV19A0A075B6N1 114 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 CBY3A6NI87 242 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 HIST1H1EP10412 219 aaKnown RBP13.91□□□□□ -0.18
VCP-203ENST00000448530 DEFA1P59665 94 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 DEFA3P59666 94 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 GFI1BQ5VTD9 330 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 ODF3Q96PU9 254 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 KCNIP2Q9NS61 270 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 OR5AC2Q9NZP5 309 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 PRELID1Q9Y255 219 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 DNAH10Q8IVF4 4471 aa13.91□□□□□ -0.18
VCP-203ENST00000448530 NPIPB6E9PJ23 425 aa13.9□□□□□ -0.18
VCP-203ENST00000448530 J3KRW8 73 aa13.9□□□□□ -0.18
VCP-203ENST00000448530 IFITM3Q01628 133 aa13.9□□□□□ -0.18
VCP-203ENST00000448530 CLINT1Q14677 625 aa13.9□□□□□ -0.18
VCP-203ENST00000448530 MRPL53Q96EL3 112 aaKnown RBP13.9□□□□□ -0.18
VCP-203ENST00000448530 ATG101Q9BSB4 218 aa13.9□□□□□ -0.18
VCP-203ENST00000448530 AAMDCQ9H7C9 122 aa13.9□□□□□ -0.18
VCP-203ENST00000448530 NOP10Q9NPE3 64 aaKnown RBP13.9□□□□□ -0.18
VCP-203ENST00000448530 DNAH6Q9C0G6 4158 aa13.9□□□□□ -0.18
VCP-203ENST00000448530 IGLV2-18A0A075B6J9 118 aa13.89□□□□□ -0.19
VCP-203ENST00000448530 SSNA1O43805 119 aa13.89□□□□□ -0.19
VCP-203ENST00000448530 CT45A10P0DMU9 189 aa13.89□□□□□ -0.19
VCP-203ENST00000448530 PYYP10082 97 aa13.89□□□□□ -0.19
VCP-203ENST00000448530 PDE6HQ13956 83 aa13.89□□□□□ -0.19
VCP-203ENST00000448530 KIR3DS1Q14943 382 aa13.89□□□□□ -0.19
VCP-203ENST00000448530 LGALS9BQ3B8N2 356 aa13.89□□□□□ -0.19
VCP-203ENST00000448530 RNASE8Q8TDE3 154 aaKnown RBP13.89□□□□□ -0.19
VCP-203ENST00000448530 BLNKQ8WV28 456 aa13.89□□□□□ -0.19
VCP-203ENST00000448530 TRAV12-3A0A0B4J271 114 aa13.88□□□□□ -0.19
VCP-203ENST00000448530 GCSAMLQ5JQS6 135 aa13.88□□□□□ -0.19
VCP-203ENST00000448530 MARVELD1Q9BSK0 173 aa13.88□□□□□ -0.19
VCP-203ENST00000448530 SNURFLB1AK76 121 aa13.87□□□□□ -0.19
VCP-203ENST00000448530 C17orf112F2Z3M2 114 aa13.87□□□□□ -0.19
VCP-203ENST00000448530 M0R3E3 92 aa13.87□□□□□ -0.19
VCP-203ENST00000448530 NUDT3O95989 172 aa13.87□□□□□ -0.19
VCP-203ENST00000448530 PET100P0DJ07 73 aa13.87□□□□□ -0.19
VCP-203ENST00000448530 H0YIZ8 118 aa13.86□□□□□ -0.19
VCP-203ENST00000448530 NDUFB4O95168 129 aa13.86□□□□□ -0.19
VCP-203ENST00000448530 FAM3BP58499 235 aaPredicted RBP13.86□□□□□ -0.19
VCP-203ENST00000448530 PPP1R1CQ8WVI7 109 aa13.86□□□□□ -0.19
VCP-203ENST00000448530 LINC00477Q96M19 166 aa13.86□□□□□ -0.19
VCP-203ENST00000448530 PYGO2Q9BRQ0 406 aa13.86□□□□□ -0.19
VCP-203ENST00000448530 SLC25A2Q9BXI2 301 aa13.86□□□□□ -0.19
VCP-203ENST00000448530 WDR61Q9GZS3 305 aaKnown RBP13.86□□□□□ -0.19
VCP-203ENST00000448530 SLC25A5P05141 298 aaKnown RBP13.85□□□□□ -0.19
VCP-203ENST00000448530 H2BFSP57053 126 aa13.85□□□□□ -0.19
VCP-203ENST00000448530 ERCC8Q13216 396 aa13.85□□□□□ -0.19
VCP-203ENST00000448530 SOHLH1Q5JUK2 328 aa13.85□□□□□ -0.19
VCP-203ENST00000448530 MIR17HGQ75NE6 70 aa13.85□□□□□ -0.19
VCP-203ENST00000448530 EXOC3-AS1Q8N2X6 119 aa13.85□□□□□ -0.19
VCP-203ENST00000448530 MRPL32Q9BYC8 188 aaKnown RBP13.85□□□□□ -0.19
VCP-203ENST00000448530 OR51M1Q9H341 326 aa13.85□□□□□ -0.19
VCP-203ENST00000448530 NACAE9PAV3 2078 aa13.84□□□□□ -0.19
VCP-203ENST00000448530 PRSS29PA6NIE9 313 aa13.84□□□□□ -0.19
VCP-203ENST00000448530 NBEAP1P0C6P0 100 aa13.84□□□□□ -0.19
VCP-203ENST00000448530 ICAM4Q14773 271 aa13.84□□□□□ -0.19
VCP-203ENST00000448530 ATP5SQ99766 215 aa13.84□□□□□ -0.19
VCP-203ENST00000448530 C7orf71A4D174 169 aa13.83□□□□□ -0.2
VCP-203ENST00000448530 TMEM78Q5T7P6 136 aa13.83□□□□□ -0.2
VCP-203ENST00000448530 FAM122CQ6P4D5 195 aa13.83□□□□□ -0.2
VCP-203ENST00000448530 FAM167A-AS1Q96KT0 104 aa13.83□□□□□ -0.2
VCP-203ENST00000448530 PAXXQ9BUH6 204 aa13.83□□□□□ -0.2
VCP-203ENST00000448530 GAGE12BA1L429 117 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms