RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 HLA-DMBP28068 263 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 GCHFRP30047 84 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 S100A7P31151 101 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 TAS2R45P59539 299 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 UBE2L3P68036 154 aaKnown RBP10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 PAFAH1B2P68402 229 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 S100A7AQ86SG5 101 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 IQCF2Q8IXL9 164 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 SFT2D1Q8WV19 159 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 PHLDA1Q8WV24 401 aaPredicted RBP10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 RNF141Q8WVD5 230 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 TMEM14CQ9P0S9 112 aa10.08□□□□□ -0.8
PDLIM2-213ENST00000448520 K7EQG2 157 aa10.07□□□□□ -0.8
PDLIM2-213ENST00000448520 SOCS3O14543 225 aa10.07□□□□□ -0.8
PDLIM2-213ENST00000448520 LGALS9CQ6DKI2 356 aa10.07□□□□□ -0.8
PDLIM2-213ENST00000448520 DPPA3Q6W0C5 159 aa10.07□□□□□ -0.8
PDLIM2-213ENST00000448520 DCANP1Q8TF63 244 aa10.07□□□□□ -0.8
PDLIM2-213ENST00000448520 MBD3L1Q8WWY6 194 aa10.07□□□□□ -0.8
PDLIM2-213ENST00000448520 GPR82Q96P67 336 aa10.07□□□□□ -0.8
PDLIM2-213ENST00000448520 RARRES2Q99969 163 aa10.07□□□□□ -0.8
PDLIM2-213ENST00000448520 NRN1Q9NPD7 142 aa10.07□□□□□ -0.8
PDLIM2-213ENST00000448520 A0A087X0K7 114 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 TRAV8-2A0A0B4J237 113 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 DNASE2O00115 360 aaPredicted RBP10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 NDUFB4O95168 129 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 CXorf1O96002 111 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 H2AFB1P0C5Y9 115 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 HIST1H1EP10412 219 aaKnown RBP10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 RAB5CP51148 216 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 DEFB1P60022 68 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 CCL20P78556 96 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 PQLC2Q6ZP29 291 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 RNF182Q8N6D2 247 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 C20orf173Q96LM9 149 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 HRH4Q9H3N8 390 aa10.06□□□□□ -0.8
PDLIM2-213ENST00000448520 TRBV19A0A075B6N1 114 aa10.05□□□□□ -0.8
PDLIM2-213ENST00000448520 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
PDLIM2-213ENST00000448520 ZNF688P0C7X2 276 aa10.05□□□□□ -0.8
PDLIM2-213ENST00000448520 SAT2Q96F10 170 aaPredicted RBP10.05□□□□□ -0.8
PDLIM2-213ENST00000448520 RNF24Q9Y225 148 aa10.05□□□□□ -0.8
PDLIM2-213ENST00000448520 TEX46H3BTG2 121 aa10.04□□□□□ -0.8
PDLIM2-213ENST00000448520 IFNA7P01567 189 aa10.04□□□□□ -0.8
PDLIM2-213ENST00000448520 TCTAP57738 103 aa10.04□□□□□ -0.8
PDLIM2-213ENST00000448520 UBE2G2P60604 165 aa10.04□□□□□ -0.8
PDLIM2-213ENST00000448520 ZNF124Q15973 351 aa10.04□□□□□ -0.8
PDLIM2-213ENST00000448520 EXOC3-AS1Q8N2X6 119 aa10.04□□□□□ -0.8
PDLIM2-213ENST00000448520 C11orf45Q8TAV5 145 aa10.04□□□□□ -0.8
PDLIM2-213ENST00000448520 C16orf92Q96LL3 132 aa10.04□□□□□ -0.8
PDLIM2-213ENST00000448520 FRAS1Q86XX4 4008 aa10.04□□□□□ -0.8
PDLIM2-213ENST00000448520 RANP62826 216 aaKnown RBP10.03□□□□□ -0.8
PDLIM2-213ENST00000448520 OR11H2Q8NH07 326 aa10.03□□□□□ -0.8
PDLIM2-213ENST00000448520 LINC00052Q96N35 136 aa10.03□□□□□ -0.8
PDLIM2-213ENST00000448520 C11orf68Q9H3H3 251 aaKnown RBP10.03□□□□□ -0.8
PDLIM2-213ENST00000448520 ZNF331Q9NQX6 463 aaPredicted RBP10.03□□□□□ -0.8
PDLIM2-213ENST00000448520 YTHDF2Q9Y5A9 579 aaKnown RBP10.03□□□□□ -0.8
PDLIM2-213ENST00000448520 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.81
PDLIM2-213ENST00000448520 M0R3E3 92 aa10.02□□□□□ -0.81
PDLIM2-213ENST00000448520 NMBP08949 121 aa10.02□□□□□ -0.81
PDLIM2-213ENST00000448520 DEFB131AP59861 70 aa10.02□□□□□ -0.81
PDLIM2-213ENST00000448520 PSMG4Q5JS54 123 aa10.02□□□□□ -0.81
PDLIM2-213ENST00000448520 SUN5Q8TC36 379 aa10.02□□□□□ -0.81
PDLIM2-213ENST00000448520 LRRC20Q8TCA0 184 aa10.02□□□□□ -0.81
PDLIM2-213ENST00000448520 Q9H3A6 140 aa10.02□□□□□ -0.81
PDLIM2-213ENST00000448520 TRAV1-1A0A0B4J248 108 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 ZNF705FA8MVS1 300 aaPredicted RBP10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 F6UB75 175 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 PSMB3P49720 205 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 MEOX2P50222 304 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 BLOC1S1P78537 153 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 ICAM4Q14773 271 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 GUK1Q16774 197 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 SLC50A1Q9BRV3 221 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 TMEM167BQ9NRX6 74 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 GNG13Q9P2W3 67 aa10.01□□□□□ -0.81
PDLIM2-213ENST00000448520 AGRNO00468 2067 aa10□□□□□ -0.81
PDLIM2-213ENST00000448520 KNCNA6PVL3 124 aa10□□□□□ -0.81
PDLIM2-213ENST00000448520 GGTLC3B5MD39 225 aa10□□□□□ -0.81
PDLIM2-213ENST00000448520 PRAC2D3DTV9 90 aa10□□□□□ -0.81
PDLIM2-213ENST00000448520 ISLRO14498 428 aa10□□□□□ -0.81
PDLIM2-213ENST00000448520 PAGE4O60829 102 aa10□□□□□ -0.81
PDLIM2-213ENST00000448520 CA1P00915 261 aaPredicted RBP10□□□□□ -0.81
PDLIM2-213ENST00000448520 HBE1P02100 147 aa10□□□□□ -0.81
PDLIM2-213ENST00000448520 ZNF705DP0CH99 300 aaPredicted RBP10□□□□□ -0.81
PDLIM2-213ENST00000448520 ZNF705BP0CI00 300 aaPredicted RBP10□□□□□ -0.81
PDLIM2-213ENST00000448520 ATP5G3P48201 142 aa10□□□□□ -0.81
PDLIM2-213ENST00000448520 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
PDLIM2-213ENST00000448520 C2CD4CQ8TF44 421 aa10□□□□□ -0.81
PDLIM2-213ENST00000448520 PGPA6NDG6 321 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 FAM74A7A6NL05 159 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 ZNF253O75346 499 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 ID1P41134 155 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 GNG5P63218 68 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 PDE6HQ13956 83 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 PSG3Q16557 428 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 ZNF767PQ75MW2 155 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 STHQ8IWL8 128 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 ZNF738Q8NE65 137 aa9.99□□□□□ -0.81
PDLIM2-213ENST00000448520 RPH3ALQ9UNE2 315 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms