RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SIGLEC15Q6ZMC9 328 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 ZNF837Q96EG3 531 aaPredicted RBP8.46□□□□□ -1.06
LINC00342-202ENST00000448494 RTL8AQ9BWD3 113 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 OCIAD1Q9NX40 245 aa8.46□□□□□ -1.06
LINC00342-202ENST00000448494 DNAH12Q6ZR08 3092 aa8.45□□□□□ -1.06
LINC00342-202ENST00000448494 TMEM30CPA0ZSE6 113 aa8.45□□□□□ -1.06
LINC00342-202ENST00000448494 C12orf77C9JDV5 145 aa8.45□□□□□ -1.06
LINC00342-202ENST00000448494 MRPS12O15235 138 aaKnown RBP8.45□□□□□ -1.06
LINC00342-202ENST00000448494 CKS2P33552 79 aa8.45□□□□□ -1.06
LINC00342-202ENST00000448494 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
LINC00342-202ENST00000448494 TMEM170BQ5T4T1 132 aa8.45□□□□□ -1.06
LINC00342-202ENST00000448494 LINC00477Q96M19 166 aa8.45□□□□□ -1.06
LINC00342-202ENST00000448494 TMEM14BQ9NUH8 114 aa8.45□□□□□ -1.06
LINC00342-202ENST00000448494 CDH23Q9H251 3354 aa8.45□□□□□ -1.06
LINC00342-202ENST00000448494 MUC3AQ02505 3323 aa8.45□□□□□ -1.06
LINC00342-202ENST00000448494 TRAV3A0A0B4J244 114 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 TEX49A0A1B0GTD5 131 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 A0A1W2PQU0 124 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 K7ENP7 123 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 CDX4O14627 284 aaPredicted RBP8.44□□□□□ -1.06
LINC00342-202ENST00000448494 FSTL3O95633 263 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 FOXF2Q12947 444 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 DEFB121Q5J5C9 76 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 PLA2G2FQ9BZM2 168 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 JPT2Q9H910 190 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 NGFP01138 241 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 ATXN8Q156A1 80 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 Q8IYB0 196 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
LINC00342-202ENST00000448494 DIDO1Q9BTC0 2240 aaKnown RBP8.44□□□□□ -1.06
LINC00342-202ENST00000448494 CRIP2P52943 208 aaPredicted RBP8.43□□□□□ -1.06
LINC00342-202ENST00000448494 LINC00205P59089 165 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 LINC01620Q4KN68 170 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 C2orf27AQ580R0 203 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 DEC1Q9P2X7 70 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 USF3Q68DE3 2245 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 UNC13CQ8NB66 2214 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 A0A1W2PP55 124 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 J3QT63 122 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 IGFBP4P22692 258 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 IL11RAQ14626 422 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 C2orf83Q53S99 150 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 C2orf48Q96LS8 159 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 SLC25A39Q9BZJ4 359 aaPredicted RBP8.43□□□□□ -1.06
LINC00342-202ENST00000448494 LINC00527Q9UJ94 153 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 ZNF256Q9Y2P7 627 aaPredicted RBP8.43□□□□□ -1.06
LINC00342-202ENST00000448494 CEP192Q8TEP8 1941 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 C2orf16Q68DN1 1984 aa8.43□□□□□ -1.06
LINC00342-202ENST00000448494 TRAV17A0A0B4J275 112 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 ACYP1P07311 99 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 PATE4P0C8F1 98 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 CCL11P51671 97 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 CEMP1Q6PRD7 247 aaPredicted RBP8.42□□□□□ -1.06
LINC00342-202ENST00000448494 Q71RC1 249 aaPredicted RBP8.42□□□□□ -1.06
LINC00342-202ENST00000448494 C1orf43Q9BWL3 253 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 SIT1Q9Y3P8 196 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 V9GYY9 64 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 PRRC2BQ5JSZ5 2229 aaKnown RBP8.42□□□□□ -1.06
LINC00342-202ENST00000448494 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 CFC1BP0CG36 223 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 CFC1P0CG37 223 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 HOXB4P17483 251 aaPredicted RBP8.42□□□□□ -1.06
LINC00342-202ENST00000448494 CD69Q07108 199 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 PATE2Q6UY27 113 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 MDP1Q86V88 176 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 VKORC1L1Q8N0U8 176 aa8.42□□□□□ -1.06
LINC00342-202ENST00000448494 ZNF407Q9C0G0 2248 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 TET2Q6N021 2002 aaPredicted RBP8.41□□□□□ -1.06
LINC00342-202ENST00000448494 H7C1H1 209 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 Q8N8P6 123 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 F8VRH5 84 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 INS-IGF2F8WCM5 200 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 CCL16O15467 120 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 NDUFA3O95167 84 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 OXTP01178 125 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 CXCL5P42830 114 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 TFF2Q03403 129 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 SCGB1D4Q6XE38 83 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 PATE1Q8WXA2 126 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 S1PR3Q99500 378 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 PYGO1Q9Y3Y4 419 aa8.41□□□□□ -1.06
LINC00342-202ENST00000448494 ESPL1Q14674 2120 aa8.4□□□□□ -1.06
LINC00342-202ENST00000448494 ZNF815PA8K554 130 aa8.4□□□□□ -1.06
LINC00342-202ENST00000448494 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
LINC00342-202ENST00000448494 ZNF415Q09FC8 603 aa8.4□□□□□ -1.06
LINC00342-202ENST00000448494 Q9H3A6 140 aa8.4□□□□□ -1.06
LINC00342-202ENST00000448494 PRORYQ9H606 182 aa8.4□□□□□ -1.06
LINC00342-202ENST00000448494 OTORQ9NRC9 128 aa8.4□□□□□ -1.06
LINC00342-202ENST00000448494 H3BT86 120 aa8.4□□□□□ -1.07
LINC00342-202ENST00000448494 PRCDQ00LT1 54 aa8.4□□□□□ -1.07
LINC00342-202ENST00000448494 FAM53AQ6NSI3 398 aaPredicted RBP8.4□□□□□ -1.07
LINC00342-202ENST00000448494 LINC00305Q7Z4B0 112 aa8.4□□□□□ -1.07
LINC00342-202ENST00000448494 PRNTQ86SH4 94 aa8.4□□□□□ -1.07
LINC00342-202ENST00000448494 FAM90A1Q86YD7 464 aa8.4□□□□□ -1.07
LINC00342-202ENST00000448494 FOXB1Q99853 325 aa8.4□□□□□ -1.07
LINC00342-202ENST00000448494 SLC25A16P16260 332 aa8.39□□□□□ -1.07
LINC00342-202ENST00000448494 EDN2P20800 178 aa8.39□□□□□ -1.07
LINC00342-202ENST00000448494 ZNF134P52741 427 aa8.39□□□□□ -1.07
LINC00342-202ENST00000448494 LYZL1Q6UWQ5 148 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms