RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 NHLH2Q02577 135 aa12.55□□□□□ -0.4
DDX56-207ENST00000448192 GUK1Q16774 197 aa12.55□□□□□ -0.4
DDX56-207ENST00000448192 LRRC37A5PQ49AS3 106 aa12.55□□□□□ -0.4
DDX56-207ENST00000448192 SAT2Q96F10 170 aaPredicted RBP12.55□□□□□ -0.4
DDX56-207ENST00000448192 INMT-MINDY4F8WBC2 141 aa12.54□□□□□ -0.4
DDX56-207ENST00000448192 TAS2R60P59551 318 aa12.54□□□□□ -0.4
DDX56-207ENST00000448192 FCN2Q15485 313 aa12.54□□□□□ -0.4
DDX56-207ENST00000448192 TMEM88Q6PEY1 159 aa12.54□□□□□ -0.4
DDX56-207ENST00000448192 UBE2DNLQ8IWF7 75 aa12.54□□□□□ -0.4
DDX56-207ENST00000448192 PARD6GQ9BYG4 376 aaPredicted RBP12.54□□□□□ -0.4
DDX56-207ENST00000448192 ZNF586Q9NXT0 402 aa12.54□□□□□ -0.4
DDX56-207ENST00000448192 OR5AC2Q9NZP5 309 aa12.54□□□□□ -0.4
DDX56-207ENST00000448192 HECTD4Q9Y4D8 3996 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 E5RGE8 158 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 PRAF2O60831 178 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 MPDU1O75352 247 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 KIR3DS1Q14943 382 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 OR5C1Q8NGR4 320 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 THAP6Q8TBB0 222 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 CHAC2Q8WUX2 184 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 NPCDR1Q9BY65 106 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 NMES1Q9C002 83 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 SLC25A31Q9H0C2 315 aa12.53□□□□□ -0.4
DDX56-207ENST00000448192 PLAC8L1A1L4L8 177 aa12.52□□□□□ -0.41
DDX56-207ENST00000448192 GCSAMLQ5JQS6 135 aa12.52□□□□□ -0.41
DDX56-207ENST00000448192 C16orf74Q96GX8 76 aa12.52□□□□□ -0.41
DDX56-207ENST00000448192 DNAH17Q9UFH2 4485 aa12.51□□□□□ -0.41
DDX56-207ENST00000448192 H7BYZ3 331 aa12.51□□□□□ -0.41
DDX56-207ENST00000448192 J3KRW8 73 aa12.51□□□□□ -0.41
DDX56-207ENST00000448192 M0R2N4 97 aa12.51□□□□□ -0.41
DDX56-207ENST00000448192 CYCSP99999 105 aaKnown RBP12.51□□□□□ -0.41
DDX56-207ENST00000448192 CLINT1Q14677 625 aa12.51□□□□□ -0.41
DDX56-207ENST00000448192 FAT2Q9NYQ8 4349 aa12.51□□□□□ -0.41
DDX56-207ENST00000448192 TRBV19A0A075B6N1 114 aa12.5□□□□□ -0.41
DDX56-207ENST00000448192 H0YIZ8 118 aa12.5□□□□□ -0.41
DDX56-207ENST00000448192 ZNF253O75346 499 aa12.5□□□□□ -0.41
DDX56-207ENST00000448192 PYYP10082 97 aa12.5□□□□□ -0.41
DDX56-207ENST00000448192 GFI1BQ5VTD9 330 aa12.5□□□□□ -0.41
DDX56-207ENST00000448192 BLNKQ8WV28 456 aa12.5□□□□□ -0.41
DDX56-207ENST00000448192 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
DDX56-207ENST00000448192 TMEM14CQ9P0S9 112 aa12.5□□□□□ -0.41
DDX56-207ENST00000448192 TIMM9Q9Y5J7 89 aa12.5□□□□□ -0.41
DDX56-207ENST00000448192 TIMM8BQ9Y5J9 83 aaPredicted RBP12.5□□□□□ -0.41
DDX56-207ENST00000448192 NPIPB6E9PJ23 425 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 F5H768 121 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 SSNA1O43805 119 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 CT45A10P0DMU9 189 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 HIST1H1EP10412 219 aaKnown RBP12.49□□□□□ -0.41
DDX56-207ENST00000448192 LEPP41159 167 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 H2BFSP57053 126 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 DEFA1P59665 94 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 DEFA3P59666 94 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 TMEM263Q8WUH6 116 aaKnown RBP12.49□□□□□ -0.41
DDX56-207ENST00000448192 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
DDX56-207ENST00000448192 IGLV2-18A0A075B6J9 118 aa12.48□□□□□ -0.41
DDX56-207ENST00000448192 TRAV12-3A0A0B4J271 114 aa12.48□□□□□ -0.41
DDX56-207ENST00000448192 M0R3E3 92 aa12.48□□□□□ -0.41
DDX56-207ENST00000448192 ATP5G1P05496 136 aa12.48□□□□□ -0.41
DDX56-207ENST00000448192 ATP5G3P48201 142 aa12.48□□□□□ -0.41
DDX56-207ENST00000448192 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
DDX56-207ENST00000448192 C15orf53Q8NAA6 179 aa12.48□□□□□ -0.41
DDX56-207ENST00000448192 RNASE8Q8TDE3 154 aaKnown RBP12.48□□□□□ -0.41
DDX56-207ENST00000448192 PPP1R1CQ8WVI7 109 aa12.48□□□□□ -0.41
DDX56-207ENST00000448192 NOP10Q9NPE3 64 aaKnown RBP12.48□□□□□ -0.41
DDX56-207ENST00000448192 CBY3A6NI87 242 aa12.47□□□□□ -0.41
DDX56-207ENST00000448192 NDUFB4O95168 129 aa12.47□□□□□ -0.41
DDX56-207ENST00000448192 RNF212Q495C1 297 aa12.47□□□□□ -0.41
DDX56-207ENST00000448192 MIR17HGQ75NE6 70 aa12.47□□□□□ -0.41
DDX56-207ENST00000448192 MRPL53Q96EL3 112 aaKnown RBP12.47□□□□□ -0.41
DDX56-207ENST00000448192 ODF3Q96PU9 254 aa12.47□□□□□ -0.41
DDX56-207ENST00000448192 SLC25A2Q9BXI2 301 aa12.47□□□□□ -0.41
DDX56-207ENST00000448192 WDR61Q9GZS3 305 aaKnown RBP12.47□□□□□ -0.41
DDX56-207ENST00000448192 NACAE9PAV3 2078 aa12.46□□□□□ -0.41
DDX56-207ENST00000448192 ERCC8Q13216 396 aa12.46□□□□□ -0.41
DDX56-207ENST00000448192 PDE6HQ13956 83 aa12.46□□□□□ -0.41
DDX56-207ENST00000448192 EXOC3-AS1Q8N2X6 119 aa12.46□□□□□ -0.41
DDX56-207ENST00000448192 AAMDCQ9H7C9 122 aa12.46□□□□□ -0.41
DDX56-207ENST00000448192 KCNIP2Q9NS61 270 aa12.46□□□□□ -0.41
DDX56-207ENST00000448192 PRELID1Q9Y255 219 aa12.46□□□□□ -0.41
DDX56-207ENST00000448192 LINC00336Q6ZUF6 198 aa12.45□□□□□ -0.42
DDX56-207ENST00000448192 FAM167A-AS1Q96KT0 104 aa12.45□□□□□ -0.42
DDX56-207ENST00000448192 ATG101Q9BSB4 218 aa12.45□□□□□ -0.42
DDX56-207ENST00000448192 SNURFLB1AK76 121 aa12.44□□□□□ -0.42
DDX56-207ENST00000448192 C17orf112F2Z3M2 114 aa12.44□□□□□ -0.42
DDX56-207ENST00000448192 MPC2O95563 127 aa12.44□□□□□ -0.42
DDX56-207ENST00000448192 NUDT3O95989 172 aa12.44□□□□□ -0.42
DDX56-207ENST00000448192 ICAM4Q14773 271 aa12.44□□□□□ -0.42
DDX56-207ENST00000448192 LGALS9BQ3B8N2 356 aa12.44□□□□□ -0.42
DDX56-207ENST00000448192 ATP5SQ99766 215 aa12.44□□□□□ -0.42
DDX56-207ENST00000448192 OR51M1Q9H341 326 aa12.44□□□□□ -0.42
DDX56-207ENST00000448192 SLC25A5P05141 298 aaKnown RBP12.43□□□□□ -0.42
DDX56-207ENST00000448192 NBEAP1P0C6P0 100 aa12.43□□□□□ -0.42
DDX56-207ENST00000448192 PET100P0DJ07 73 aa12.43□□□□□ -0.42
DDX56-207ENST00000448192 FAM122CQ6P4D5 195 aa12.43□□□□□ -0.42
DDX56-207ENST00000448192 LINC00477Q96M19 166 aa12.43□□□□□ -0.42
DDX56-207ENST00000448192 PAXXQ9BUH6 204 aa12.43□□□□□ -0.42
DDX56-207ENST00000448192 MRPL32Q9BYC8 188 aaKnown RBP12.43□□□□□ -0.42
DDX56-207ENST00000448192 SMIM3Q9BZL3 60 aa12.43□□□□□ -0.42
DDX56-207ENST00000448192 AGPAT4-IT1Q9H0P7 198 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms