RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 DUSP14O95147 198 aaKnown RBP9.62□□□□□ -0.87
ERGIC3-209ENST00000447986 OR10J4P0C629 311 aa9.62□□□□□ -0.87
ERGIC3-209ENST00000447986 UBE2L3P68036 154 aaKnown RBP9.62□□□□□ -0.87
ERGIC3-209ENST00000447986 SMUG1Q53HV7 270 aa9.62□□□□□ -0.87
ERGIC3-209ENST00000447986 AKR1C8PQ5T2L2 129 aa9.62□□□□□ -0.87
ERGIC3-209ENST00000447986 SAT2Q96F10 170 aaPredicted RBP9.62□□□□□ -0.87
ERGIC3-209ENST00000447986 ACTR3CQ9C0K3 210 aaPredicted RBP9.62□□□□□ -0.87
ERGIC3-209ENST00000447986 CYTL1Q9NRR1 136 aa9.62□□□□□ -0.87
ERGIC3-209ENST00000447986 SLC17A3O00476 420 aa9.61□□□□□ -0.87
ERGIC3-209ENST00000447986 C4BPBP20851 252 aa9.61□□□□□ -0.87
ERGIC3-209ENST00000447986 DEFB135Q30KP9 77 aa9.61□□□□□ -0.87
ERGIC3-209ENST00000447986 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
ERGIC3-209ENST00000447986 TMUB2Q71RG4 321 aa9.61□□□□□ -0.87
ERGIC3-209ENST00000447986 RPUSD4Q96CM3 377 aaKnown RBP9.61□□□□□ -0.87
ERGIC3-209ENST00000447986 PRELID1Q9Y255 219 aa9.61□□□□□ -0.87
ERGIC3-209ENST00000447986 F6UB75 175 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 SPRY2O43597 315 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 IGKV3-20P01619 116 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 GDF5OSQ5U4N7 250 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 RPP25LQ8N5L8 163 aaKnown RBP9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 TPT1P13693 172 aaKnown RBP9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 HLA-DMBP28068 263 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 DEFB1P60022 68 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 ZFP69Q49AA0 526 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 LYPD1Q8N2G4 141 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 OR8A1Q8NGG7 326 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 OR10J6PQ8NGY7 276 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 RAB24Q969Q5 203 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 RNF183Q96D59 192 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 FXYD5Q96DB9 178 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 MRPL53Q96EL3 112 aaKnown RBP9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 RETNQ9HD89 108 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 PPP1R14DQ9NXH3 145 aa9.6□□□□□ -0.87
ERGIC3-209ENST00000447986 PRKDCP78527 4128 aaKnown RBP9.59□□□□□ -0.87
ERGIC3-209ENST00000447986 SEC11BP0C7V7 166 aa9.59□□□□□ -0.87
ERGIC3-209ENST00000447986 STAG3L2P0CL84 134 aa9.59□□□□□ -0.87
ERGIC3-209ENST00000447986 STAG3L3P0CL85 134 aa9.59□□□□□ -0.87
ERGIC3-209ENST00000447986 CNN1P51911 297 aaKnown RBP9.59□□□□□ -0.87
ERGIC3-209ENST00000447986 HIST1H1AQ02539 215 aaPredicted RBP9.59□□□□□ -0.87
ERGIC3-209ENST00000447986 FAM74A1Q5RGS3 127 aa9.59□□□□□ -0.87
ERGIC3-209ENST00000447986 OVOL2Q9BRP0 275 aa9.59□□□□□ -0.87
ERGIC3-209ENST00000447986 HMGB3O15347 200 aaKnown RBP9.58□□□□□ -0.88
ERGIC3-209ENST00000447986 NDUFB4O95168 129 aa9.58□□□□□ -0.88
ERGIC3-209ENST00000447986 CXorf1O96002 111 aa9.58□□□□□ -0.88
ERGIC3-209ENST00000447986 ARL14EPLP0DKL9 152 aa9.58□□□□□ -0.88
ERGIC3-209ENST00000447986 ICAM4Q14773 271 aa9.58□□□□□ -0.88
ERGIC3-209ENST00000447986 LGALSLQ3ZCW2 172 aaPredicted RBP9.58□□□□□ -0.88
ERGIC3-209ENST00000447986 EIF5AL1Q6IS14 154 aaKnown RBP9.58□□□□□ -0.88
ERGIC3-209ENST00000447986 BAP18Q8IXM2 172 aa9.58□□□□□ -0.88
ERGIC3-209ENST00000447986 ZNF503Q96F45 646 aa9.58□□□□□ -0.88
ERGIC3-209ENST00000447986 CTXND1A0A1B0GTU2 59 aa9.57□□□□□ -0.88
ERGIC3-209ENST00000447986 ZNF705FA8MVS1 300 aaPredicted RBP9.57□□□□□ -0.88
ERGIC3-209ENST00000447986 UMAD1C9J7I0 102 aa9.57□□□□□ -0.88
ERGIC3-209ENST00000447986 AMBPP02760 352 aa9.57□□□□□ -0.88
ERGIC3-209ENST00000447986 CSN1S1P47710 185 aa9.57□□□□□ -0.88
ERGIC3-209ENST00000447986 RANP62826 216 aaKnown RBP9.57□□□□□ -0.88
ERGIC3-209ENST00000447986 EXOC3-AS1Q8N2X6 119 aa9.57□□□□□ -0.88
ERGIC3-209ENST00000447986 CLRN3Q8NCR9 226 aa9.57□□□□□ -0.88
ERGIC3-209ENST00000447986 RARRES2Q99969 163 aa9.57□□□□□ -0.88
ERGIC3-209ENST00000447986 EIF3GO75821 320 aaKnown RBP eCLIP9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 ZNF705DP0CH99 300 aaPredicted RBP9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 ZNF705BP0CI00 300 aaPredicted RBP9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 STOML3Q8TAV4 291 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 PHYHIPLQ96FC7 376 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 Q9H3A6 140 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 TMEM167BQ9NRX6 74 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 XCL2Q9UBD3 114 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 A8MTW9 85 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 M0R3E3 92 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 ODF1Q14990 250 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 CMTM2Q8TAZ6 248 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 RXFP4Q8TDU9 374 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 WWC2-AS2Q96NR7 200 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 SLC35B3Q9H1N7 401 aa9.56□□□□□ -0.88
ERGIC3-209ENST00000447986 GIG44P09565 113 aaPredicted RBP9.55□□□□□ -0.88
ERGIC3-209ENST00000447986 GCHFRP30047 84 aa9.55□□□□□ -0.88
ERGIC3-209ENST00000447986 FXYD7P58549 80 aa9.55□□□□□ -0.88
ERGIC3-209ENST00000447986 CD300CQ08708 224 aa9.55□□□□□ -0.88
ERGIC3-209ENST00000447986 CDPF1Q6NVV7 123 aa9.55□□□□□ -0.88
ERGIC3-209ENST00000447986 SLC51BQ86UW2 128 aa9.55□□□□□ -0.88
ERGIC3-209ENST00000447986 OR11H2Q8NH07 326 aa9.55□□□□□ -0.88
ERGIC3-209ENST00000447986 PRAC2D3DTV9 90 aa9.54□□□□□ -0.88
ERGIC3-209ENST00000447986 TSPOP30536 169 aa9.54□□□□□ -0.88
ERGIC3-209ENST00000447986 AMTNQ6UX39 209 aa9.54□□□□□ -0.88
ERGIC3-209ENST00000447986 DPPA3Q6W0C5 159 aa9.54□□□□□ -0.88
ERGIC3-209ENST00000447986 OTORQ9NRC9 128 aa9.54□□□□□ -0.88
ERGIC3-209ENST00000447986 MAP1LC3B2A6NCE7 125 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 PGPA6NDG6 321 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 NPIPB6E9PJ23 425 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 CDKN1BP46527 198 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 ZNF726P1Q15940 193 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 SPINK13Q1W4C9 94 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 C9orf62Q8N4C0 152 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 CSNK1G2-AS1Q8NCQ2 148 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 TMED6Q8WW62 240 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 LINC00477Q96M19 166 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 MAP1LC3BQ9GZQ8 125 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 GOLT1BQ9Y3E0 138 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 INSP01308 110 aa9.53□□□□□ -0.88
ERGIC3-209ENST00000447986 PRB4P10163 310 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms