RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 PPT1P50897 306 aa8.59□□□□□ -1.03
LINC00408-201ENST00000447784 FOXI2Q6ZQN5 318 aa8.59□□□□□ -1.03
LINC00408-201ENST00000447784 EXOC3-AS1Q8N2X6 119 aa8.59□□□□□ -1.03
LINC00408-201ENST00000447784 OR10J6PQ8NGY7 276 aa8.59□□□□□ -1.03
LINC00408-201ENST00000447784 RXFP4Q8TDU9 374 aa8.59□□□□□ -1.03
LINC00408-201ENST00000447784 MRPL53Q96EL3 112 aaKnown RBP8.59□□□□□ -1.03
LINC00408-201ENST00000447784 C20orf173Q96LM9 149 aa8.59□□□□□ -1.03
LINC00408-201ENST00000447784 Q9H3A6 140 aa8.59□□□□□ -1.03
LINC00408-201ENST00000447784 OTORQ9NRC9 128 aa8.59□□□□□ -1.03
LINC00408-201ENST00000447784 PPP1R14DQ9NXH3 145 aa8.59□□□□□ -1.03
LINC00408-201ENST00000447784 LOC102724200A0A096LPH7 203 aaPredicted RBP8.58□□□□□ -1.04
LINC00408-201ENST00000447784 PGPA6NDG6 321 aa8.58□□□□□ -1.04
LINC00408-201ENST00000447784 A8MZ25 164 aa8.58□□□□□ -1.04
LINC00408-201ENST00000447784 RPL35AP18077 110 aaKnown RBP8.58□□□□□ -1.04
LINC00408-201ENST00000447784 HLA-DMBP28068 263 aa8.58□□□□□ -1.04
LINC00408-201ENST00000447784 NUTF2P61970 127 aaKnown RBP8.58□□□□□ -1.04
LINC00408-201ENST00000447784 ZNF124Q15973 351 aa8.58□□□□□ -1.04
LINC00408-201ENST00000447784 TEX261Q6UWH6 196 aa8.58□□□□□ -1.04
LINC00408-201ENST00000447784 OR4B1Q8NGF8 309 aa8.58□□□□□ -1.04
LINC00408-201ENST00000447784 TMPRSS5Q9H3S3 457 aa8.58□□□□□ -1.04
LINC00408-201ENST00000447784 SAV1Q9H4B6 383 aaPredicted RBP8.58□□□□□ -1.04
LINC00408-201ENST00000447784 TRAV1-1A0A0B4J248 108 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 A0A1W2PRE2 83 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
LINC00408-201ENST00000447784 IGKV3-20P01619 116 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 FRMD6-AS1P0C7T7 363 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 APOC4P55056 127 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 UBE2G2P60604 165 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 HIST1H1AQ02539 215 aaPredicted RBP8.57□□□□□ -1.04
LINC00408-201ENST00000447784 CST9LP1Q5W188 147 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 ZNF680Q8NEM1 530 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 OR8A1Q8NGG7 326 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 SUN5Q8TC36 379 aa8.57□□□□□ -1.04
LINC00408-201ENST00000447784 NKX6-2Q9C056 277 aaPredicted RBP8.57□□□□□ -1.04
LINC00408-201ENST00000447784 A0A0J9YX75 114 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 F6UB75 175 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 H3BMM0 161 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 K7EQM0 130 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 M0R3E3 92 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 IFNA1P01562 189 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 SLC25A5P05141 298 aaKnown RBP8.56□□□□□ -1.04
LINC00408-201ENST00000447784 HLA-DRB4P13762 266 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
LINC00408-201ENST00000447784 MORN3Q6PF18 240 aaPredicted RBP8.56□□□□□ -1.04
LINC00408-201ENST00000447784 CITED4Q96RK1 184 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 GNG13Q9P2W3 67 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 RPH3ALQ9UNE2 315 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 HLA-DRB4X5D2U9 266 aa8.56□□□□□ -1.04
LINC00408-201ENST00000447784 ZNF705DP0CH99 300 aaPredicted RBP8.55□□□□□ -1.04
LINC00408-201ENST00000447784 ZNF705BP0CI00 300 aaPredicted RBP8.55□□□□□ -1.04
LINC00408-201ENST00000447784 CNN1P51911 297 aaKnown RBP8.55□□□□□ -1.04
LINC00408-201ENST00000447784 DEFB1P60022 68 aa8.55□□□□□ -1.04
LINC00408-201ENST00000447784 RAB14P61106 215 aa8.55□□□□□ -1.04
LINC00408-201ENST00000447784 TRPT1Q86TN4 253 aaKnown RBP8.55□□□□□ -1.04
LINC00408-201ENST00000447784 SBSPONQ8IVN8 264 aa8.55□□□□□ -1.04
LINC00408-201ENST00000447784 C5orf17Q8NAS9 161 aa8.55□□□□□ -1.04
LINC00408-201ENST00000447784 CSTL1Q9H114 145 aa8.55□□□□□ -1.04
LINC00408-201ENST00000447784 MANBALQ9NQG1 85 aa8.55□□□□□ -1.04
LINC00408-201ENST00000447784 U3KQK5 164 aa8.55□□□□□ -1.04
LINC00408-201ENST00000447784 ARL2-SNX15V9GYD0 113 aa8.55□□□□□ -1.04
LINC00408-201ENST00000447784 KIR2DL5BA0A0G2JN68 375 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 KIR2DL5BA0A0G2JPC4 375 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 SERTM2A0A1B0GWG4 89 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 RBMY1BA6NDE4 496 aaKnown RBP8.54□□□□□ -1.04
LINC00408-201ENST00000447784 RBMY1EA6NEQ0 496 aaKnown RBP8.54□□□□□ -1.04
LINC00408-201ENST00000447784 PRAC2D3DTV9 90 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 F6UZH7 168 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 UBE2CO00762 179 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 PAGE4O60829 102 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 RBMY1DP0C7P1 496 aaKnown RBP8.54□□□□□ -1.04
LINC00408-201ENST00000447784 TMEM78Q5T7P6 136 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 GDF5OSQ5U4N7 250 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 KIR2DL5AQ8N109 375 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 WWC2-AS2Q96NR7 200 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 ASCL2Q99929 193 aa8.54□□□□□ -1.04
LINC00408-201ENST00000447784 YTHDF2Q9Y5A9 579 aaKnown RBP8.54□□□□□ -1.04
LINC00408-201ENST00000447784 DNAH9Q9NYC9 4486 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 FAM74A7A6NL05 159 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 GGTLC3B5MD39 225 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 DIRC3C9JPN6 131 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 CA1P00915 261 aaPredicted RBP8.53□□□□□ -1.04
LINC00408-201ENST00000447784 PRB4P10163 310 aaPredicted RBP8.53□□□□□ -1.04
LINC00408-201ENST00000447784 TSPOP30536 169 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 TAGLN2P37802 199 aaKnown RBP8.53□□□□□ -1.04
LINC00408-201ENST00000447784 CCL20P78556 96 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 LINC00477Q96M19 166 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 CLUHP3Q96NS8 147 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 TCEAL7Q9BRU2 100 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 C1QTNF4Q9BXJ3 329 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 EPDR1Q9UM22 224 aa8.53□□□□□ -1.04
LINC00408-201ENST00000447784 IGKV2-40A0A087WW87 121 aaPredicted RBP8.52□□□□□ -1.05
LINC00408-201ENST00000447784 RBAKDNA6NC62 111 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 C11orf94C9JXX5 98 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 NPIPB6E9PJ23 425 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 IGKV2D-40P01614 121 aaPredicted RBP8.52□□□□□ -1.05
LINC00408-201ENST00000447784 AMBPP02760 352 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 TCRAP04437 139 aa8.52□□□□□ -1.05
LINC00408-201ENST00000447784 GNG5P63218 68 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms