RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 HLA-DRB4X5D2U9 266 aa9.74□□□□□ -0.85
HLA-DOB-207ENST00000447394 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
HLA-DOB-207ENST00000447394 GCHFRP30047 84 aa9.73□□□□□ -0.85
HLA-DOB-207ENST00000447394 RANP62826 216 aaKnown RBP9.73□□□□□ -0.85
HLA-DOB-207ENST00000447394 HIST1H1AQ02539 215 aaPredicted RBP9.73□□□□□ -0.85
HLA-DOB-207ENST00000447394 FAM74A1Q5RGS3 127 aa9.73□□□□□ -0.85
HLA-DOB-207ENST00000447394 SLC51BQ86UW2 128 aa9.73□□□□□ -0.85
HLA-DOB-207ENST00000447394 OR4B1Q8NGF8 309 aa9.73□□□□□ -0.85
HLA-DOB-207ENST00000447394 TGP01266 2768 aa9.73□□□□□ -0.85
HLA-DOB-207ENST00000447394 MAP1LC3B2A6NCE7 125 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 ZNF253O75346 499 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 CA1P00915 261 aaPredicted RBP9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 GIG44P09565 113 aaPredicted RBP9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 CNN1P51911 297 aaKnown RBP9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 EIF5AP63241 154 aaKnown RBP9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 PDE6HQ13956 83 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 DEFB135Q30KP9 77 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 EBLN2Q6P2I7 272 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 PQLC2Q6ZP29 291 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 TM2D3Q9BRN9 247 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 MAP1LC3BQ9GZQ8 125 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 SLC35B3Q9H1N7 401 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 Q9H3A6 140 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 CLEC5AQ9NY25 188 aa9.72□□□□□ -0.85
HLA-DOB-207ENST00000447394 IGKV2-40A0A087WW87 121 aaPredicted RBP9.71□□□□□ -0.86
HLA-DOB-207ENST00000447394 CXorf1O96002 111 aa9.71□□□□□ -0.86
HLA-DOB-207ENST00000447394 IGKV2D-40P01614 121 aaPredicted RBP9.71□□□□□ -0.86
HLA-DOB-207ENST00000447394 APOC4P55056 127 aa9.71□□□□□ -0.86
HLA-DOB-207ENST00000447394 PSG9Q00887 426 aa9.71□□□□□ -0.86
HLA-DOB-207ENST00000447394 OR8A1Q8NGG7 326 aa9.71□□□□□ -0.86
HLA-DOB-207ENST00000447394 RPH3ALQ9UNE2 315 aa9.71□□□□□ -0.86
HLA-DOB-207ENST00000447394 NBEAL2Q6ZNJ1 2754 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 KIR2DL5BA0A0G2JN68 375 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 KIR2DL5BA0A0G2JPC4 375 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 UBE2G2P60604 165 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 GNG5P63218 68 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 ERCC8Q13216 396 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 AMTNQ6UX39 209 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 ALKAL2Q6UX46 152 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 KIR2DL5AQ8N109 375 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 KIR2DL5BQ8NHK3 375 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 CSTL1Q9H114 145 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 AAMDCQ9H7C9 122 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 XCL2Q9UBD3 114 aa9.7□□□□□ -0.86
HLA-DOB-207ENST00000447394 UMAD1C9J7I0 102 aa9.69□□□□□ -0.86
HLA-DOB-207ENST00000447394 M0R2Z0 102 aa9.69□□□□□ -0.86
HLA-DOB-207ENST00000447394 SUN5Q8TC36 379 aa9.69□□□□□ -0.86
HLA-DOB-207ENST00000447394 YTHDF2Q9Y5A9 579 aaKnown RBP9.69□□□□□ -0.86
HLA-DOB-207ENST00000447394 A8MTW9 85 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 GGTLC3B5MD39 225 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 SULT1A2P50226 295 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 SPINK13Q1W4C9 94 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 SFT2D1Q8WV19 159 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 MRPL53Q96EL3 112 aaKnown RBP9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 RCHY1Q96PM5 261 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 VGLL1Q99990 258 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 SPATA25Q9BR10 227 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 OTORQ9NRC9 128 aa9.68□□□□□ -0.86
HLA-DOB-207ENST00000447394 TRAV12-2A0A075B6T6 113 aa9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 PGPA6NDG6 321 aa9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 NPIPB6E9PJ23 425 aa9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 DUSP14O95147 198 aaKnown RBP9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 CCL20P78556 96 aa9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 KIR3DS1Q14943 382 aa9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 MORN3Q6PF18 240 aaPredicted RBP9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 OR10J6PQ8NGY7 276 aa9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 MBD3L1Q8WWY6 194 aa9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 TMEM167BQ9NRX6 74 aa9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 PRELID1Q9Y255 219 aa9.67□□□□□ -0.86
HLA-DOB-207ENST00000447394 J3KRW8 73 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 SPRY2O43597 315 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 SLC25A5P05141 298 aaKnown RBP9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 H2AFB1P0C5Y9 115 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 CT45A10P0DMU9 189 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 DPPA3Q6W0C5 159 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 LYPD1Q8N2G4 141 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 CSNK1G2-AS1Q8NCQ2 148 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 Q8TAT8 98 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 RNF183Q96D59 192 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 ZMAT4Q9H898 229 aa9.66□□□□□ -0.86
HLA-DOB-207ENST00000447394 FAM74A7A6NL05 159 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 DIRC3C9JPN6 131 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 UBE2CO00762 179 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 CRXO43186 299 aaPredicted RBP9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 NHLRC4P0CG21 123 aaPredicted RBP9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 RBMY1A1P0DJD3 496 aaKnown RBP9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 RBMY1CP0DJD4 496 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 ATP5G3P48201 142 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 SUMO1P63165 101 aaKnown RBP9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 RBMY1FQ15415 496 aaKnown RBP9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 EIF5AL1Q6IS14 154 aaKnown RBP9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 GOLT1AQ6ZVE7 132 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 Q6ZWC4 215 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 SGK494Q96LW2 274 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 CLUHP3Q96NS8 147 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 AGPAT4-IT1Q9H0P7 198 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 U3KQK5 164 aa9.65□□□□□ -0.86
HLA-DOB-207ENST00000447394 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
HLA-DOB-207ENST00000447394 TRAV8-1A0A0A6YYK1 113 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms