RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 BCL6BQ8N143 479 aaPredicted RBP10.4□□□□□ -0.75
DDX56-206ENST00000446987 ITLN1Q8WWA0 313 aa10.4□□□□□ -0.75
DDX56-206ENST00000446987 COQ2Q96H96 371 aa10.4□□□□□ -0.75
DDX56-206ENST00000446987 TCRBV4S1A1TA0A5B7 111 aa10.39□□□□□ -0.75
DDX56-206ENST00000446987 CA6P23280 308 aa10.39□□□□□ -0.75
DDX56-206ENST00000446987 TNFAIP6P98066 277 aaPredicted RBP10.39□□□□□ -0.75
DDX56-206ENST00000446987 KRTAP1-1Q07627 177 aa10.39□□□□□ -0.75
DDX56-206ENST00000446987 WDR86Q86TI4 376 aa10.39□□□□□ -0.75
DDX56-206ENST00000446987 CACNG8Q8WXS5 425 aa10.39□□□□□ -0.75
DDX56-206ENST00000446987 SLC25A33Q9BSK2 321 aa10.39□□□□□ -0.75
DDX56-206ENST00000446987 BPESC1Q9GZL8 116 aa10.39□□□□□ -0.75
DDX56-206ENST00000446987 KLF12Q9Y4X4 402 aa10.39□□□□□ -0.75
DDX56-206ENST00000446987 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
DDX56-206ENST00000446987 TEP1Q99973 2627 aaKnown RBP10.39□□□□□ -0.75
DDX56-206ENST00000446987 J3QT63 122 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 NCR2O95944 276 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 RPL32P62910 135 aaKnown RBP10.38□□□□□ -0.75
DDX56-206ENST00000446987 ZNF146Q15072 292 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 SPINK9Q5DT21 86 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 PIP4P2Q8N4L2 257 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 MAPK1IP1LQ8NDC0 245 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 ARPC1AQ92747 370 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 IGHV3-64DA0A0J9YX35 117 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 C19orf71A6NCJ1 209 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 C3orf80F5H4A9 247 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 WNT9BO14905 357 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 GATA3P23771 443 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 FXYD2P54710 66 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 HOXA4Q00056 320 aaPredicted RBP10.38□□□□□ -0.75
DDX56-206ENST00000446987 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 ACP7Q6ZNF0 438 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 SH2D6Q7Z4S9 175 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 CEND1Q8N111 149 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 OR10X1Q8NGY0 326 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 TMEM190Q8WZ59 177 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 MCRIP2Q9BUT9 160 aaKnown RBP10.38□□□□□ -0.75
DDX56-206ENST00000446987 MLST8Q9BVC4 326 aa10.38□□□□□ -0.75
DDX56-206ENST00000446987 IGHV4-61A0A0C4DH41 118 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 OOEPA6NGQ2 149 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 NPIPB6E9PJ23 425 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 APOMO95445 188 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 APOHP02749 345 aaPredicted RBP10.37□□□□□ -0.75
DDX56-206ENST00000446987 GCSHP23434 173 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 DSCR9P59020 149 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 ZNF329Q86UD4 541 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 SYT8Q8NBV8 401 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 HARBI1Q96MB7 349 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 C18orf15Q96N68 181 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 C20orf78Q9BR46 151 aa10.37□□□□□ -0.75
DDX56-206ENST00000446987 TMEM30CPA0ZSE6 113 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 OR2H2O95918 312 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 ARL3P36405 182 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 KIR2DS2P43631 304 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 GATA4P43694 442 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 ERVK-16P61578 105 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 ZFAND6Q6FIF0 208 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 ABHD12Q8N2K0 398 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 RITA1Q96K30 269 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 SMR3AQ99954 134 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 TCF19Q9Y242 345 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 MT-ATP8P03928 68 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 SLC25A16P16260 332 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 MYCNOSP40205 109 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 Q6AWC8 147 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 OR5AN1Q8NGI8 311 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 FAM167A-AS1Q96KT0 104 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 PIMREGQ9BSJ6 248 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 CHAC1Q9BUX1 264 aa10.36□□□□□ -0.75
DDX56-206ENST00000446987 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 A0A1B0GWB2 263 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 FBLL1A6NHQ2 334 aaKnown RBP10.35□□□□□ -0.75
DDX56-206ENST00000446987 TMEM262E9PQX1 116 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 LINC01619G3V211 115 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 ACTL6BO94805 426 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 P01737 135 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 SRD5A1P18405 259 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 UBE2L3P68036 154 aaKnown RBP10.35□□□□□ -0.75
DDX56-206ENST00000446987 C11orf53Q8IXP5 236 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 ZNF414Q96IQ9 312 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 ZNF714Q96N38 554 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 POLDIP2Q9Y2S7 368 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 TLN2Q9Y4G6 2542 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 ABCA1O95477 2261 aa10.35□□□□□ -0.75
DDX56-206ENST00000446987 LINC00473A8K010 186 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 XGP55808 180 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 TCTAP57738 103 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 LOXL1Q08397 574 aaPredicted RBP10.34□□□□□ -0.75
DDX56-206ENST00000446987 ZNF562Q6V9R5 426 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 SLC25A48Q6ZT89 311 aaKnown RBP10.34□□□□□ -0.75
DDX56-206ENST00000446987 MOGAT3Q86VF5 341 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 Q8TCH9 128 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 HIF1ANQ9NWT6 349 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 FOXA2Q9Y261 457 aaPredicted RBP10.34□□□□□ -0.75
DDX56-206ENST00000446987 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.34□□□□□ -0.752e-7■■■□□ 17.6
DDX56-206ENST00000446987 MALRD1Q5VYJ5 2156 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 A0A096LNJ9 63 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 BRI3O95415 125 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 RRN3P1Q2M238 152 aa10.34□□□□□ -0.75
DDX56-206ENST00000446987 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms