RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 CDPF1Q6NVV7 123 aa16.74■□□□□ 0.27
PMS1-214ENST00000446877 Q6ZRN7 208 aaPredicted RBP16.74■□□□□ 0.27
PMS1-214ENST00000446877 FRZBQ92765 325 aa16.74■□□□□ 0.27
PMS1-214ENST00000446877 SMIM8Q96KF7 97 aa16.74■□□□□ 0.27
PMS1-214ENST00000446877 PYGO2Q9BRQ0 406 aa16.74■□□□□ 0.27
PMS1-214ENST00000446877 FNDC10F2Z333 226 aa16.73■□□□□ 0.27
PMS1-214ENST00000446877 PYDC2Q56P42 97 aa16.73■□□□□ 0.27
PMS1-214ENST00000446877 ZNF546Q86UE3 836 aa16.73■□□□□ 0.27
PMS1-214ENST00000446877 OR10P1Q8NGE3 313 aa16.73■□□□□ 0.27
PMS1-214ENST00000446877 VSIG2Q96IQ7 327 aa16.73■□□□□ 0.27
PMS1-214ENST00000446877 PXMP4Q9Y6I8 212 aa16.73■□□□□ 0.27
PMS1-214ENST00000446877 H3BTX0 84 aa16.72■□□□□ 0.27
PMS1-214ENST00000446877 IFNA5P01569 189 aa16.72■□□□□ 0.27
PMS1-214ENST00000446877 METTL15P1P0C7V9 234 aa16.72■□□□□ 0.27
PMS1-214ENST00000446877 FUSP35637 526 aaKnown RBP eCLIP16.72■□□□□ 0.27
PMS1-214ENST00000446877 COX7A2P2O60397 106 aa16.71■□□□□ 0.27
PMS1-214ENST00000446877 CCNKO75909 580 aa16.71■□□□□ 0.27
PMS1-214ENST00000446877 CT45A10P0DMU9 189 aa16.71■□□□□ 0.27
PMS1-214ENST00000446877 XGP55808 180 aa16.71■□□□□ 0.27
PMS1-214ENST00000446877 ODF3Q96PU9 254 aa16.71■□□□□ 0.27
PMS1-214ENST00000446877 VPS13BQ7Z7G8 4022 aa16.71■□□□□ 0.26
PMS1-214ENST00000446877 Q5VSD8 79 aa16.7■□□□□ 0.26
PMS1-214ENST00000446877 TMEM14EPQ6UXP3 125 aa16.7■□□□□ 0.26
PMS1-214ENST00000446877 ZNF431Q8TF32 576 aaPredicted RBP16.7■□□□□ 0.26
PMS1-214ENST00000446877 TRIM63Q969Q1 353 aa16.7■□□□□ 0.26
PMS1-214ENST00000446877 SLC17A3O00476 420 aa16.69■□□□□ 0.26
PMS1-214ENST00000446877 NXPH4O95158 308 aa16.69■□□□□ 0.26
PMS1-214ENST00000446877 UBE2MP61081 183 aaKnown RBP16.69■□□□□ 0.26
PMS1-214ENST00000446877 NFE4Q86UQ8 179 aa16.69■□□□□ 0.26
PMS1-214ENST00000446877 ZBTB8BQ8NAP8 495 aaPredicted RBP16.69■□□□□ 0.26
PMS1-214ENST00000446877 ZNF680Q8NEM1 530 aa16.69■□□□□ 0.26
PMS1-214ENST00000446877 DEDD2Q8WXF8 326 aa16.69■□□□□ 0.26
PMS1-214ENST00000446877 C18orf15Q96N68 181 aa16.69■□□□□ 0.26
PMS1-214ENST00000446877 GSN-AS1Q9NRJ2 163 aa16.69■□□□□ 0.26
PMS1-214ENST00000446877 TRGV1A0A0A0MS02 117 aa16.68■□□□□ 0.26
PMS1-214ENST00000446877 A6NHS1 94 aa16.68■□□□□ 0.26
PMS1-214ENST00000446877 AGPAT2O15120 278 aa16.68■□□□□ 0.26
PMS1-214ENST00000446877 C4orf46Q504U0 113 aa16.68■□□□□ 0.26
PMS1-214ENST00000446877 FUT9Q9Y231 359 aa16.68■□□□□ 0.26
PMS1-214ENST00000446877 MYCBP2O75592 4640 aa16.68■□□□□ 0.26
PMS1-214ENST00000446877 LINC00854A0A1B0GVQ3 168 aa16.67■□□□□ 0.26
PMS1-214ENST00000446877 C9orf170A2RU37 121 aa16.67■□□□□ 0.26
PMS1-214ENST00000446877 NPIPB6E9PJ23 425 aa16.67■□□□□ 0.26
PMS1-214ENST00000446877 SLC25A5P05141 298 aaKnown RBP16.67■□□□□ 0.26
PMS1-214ENST00000446877 C10orf113Q5VZT2 155 aa16.67■□□□□ 0.26
PMS1-214ENST00000446877 ICOSQ9Y6W8 199 aa16.67■□□□□ 0.26
PMS1-214ENST00000446877 H3BQ15 152 aa16.66■□□□□ 0.26
PMS1-214ENST00000446877 PAX4O43316 350 aa16.66■□□□□ 0.26
PMS1-214ENST00000446877 IGLC2P0DOY2 106 aa16.66■□□□□ 0.26
PMS1-214ENST00000446877 OPCMLQ14982 345 aa16.66■□□□□ 0.26
PMS1-214ENST00000446877 GUK1Q16774 197 aa16.66■□□□□ 0.26
PMS1-214ENST00000446877 TMEM37Q8WXS4 190 aa16.66■□□□□ 0.26
PMS1-214ENST00000446877 BATF3Q9NR55 127 aa16.66■□□□□ 0.26
PMS1-214ENST00000446877 TRAV9-2A0A087WT02 112 aa16.65■□□□□ 0.26
PMS1-214ENST00000446877 SCGB1D2O95969 90 aa16.65■□□□□ 0.26
PMS1-214ENST00000446877 SAT2Q96F10 170 aaPredicted RBP16.65■□□□□ 0.26
PMS1-214ENST00000446877 GGACTQ9BVM4 153 aa16.65■□□□□ 0.26
PMS1-214ENST00000446877 TNFRSF18Q9Y5U5 241 aa16.65■□□□□ 0.26
PMS1-214ENST00000446877 TSC22D2O75157 780 aa16.64■□□□□ 0.25
PMS1-214ENST00000446877 ZNF324O75467 553 aaPredicted RBP16.64■□□□□ 0.25
PMS1-214ENST00000446877 TAS2R30P59541 319 aa16.64■□□□□ 0.25
PMS1-214ENST00000446877 DNAJC4Q9NNZ3 241 aa16.64■□□□□ 0.25
PMS1-214ENST00000446877 C7orf71A4D174 169 aa16.63■□□□□ 0.25
PMS1-214ENST00000446877 S100A5P33763 92 aa16.63■□□□□ 0.25
PMS1-214ENST00000446877 KRTAP10-1P60331 282 aa16.63■□□□□ 0.25
PMS1-214ENST00000446877 RAB31Q13636 194 aa16.63■□□□□ 0.25
PMS1-214ENST00000446877 MORN5Q5VZ52 161 aa16.63■□□□□ 0.25
PMS1-214ENST00000446877 Q6ZRG5 221 aa16.63■□□□□ 0.25
PMS1-214ENST00000446877 EIF4E3Q8N5X7 224 aaKnown RBP16.63■□□□□ 0.25
PMS1-214ENST00000446877 C11orf72Q8NBR9 251 aa16.63■□□□□ 0.25
PMS1-214ENST00000446877 A0A087WTM6 91 aa16.62■□□□□ 0.25
PMS1-214ENST00000446877 SLAQ13239 276 aa16.62■□□□□ 0.25
PMS1-214ENST00000446877 MGST2Q99735 147 aa16.62■□□□□ 0.25
PMS1-214ENST00000446877 ICAM4Q14773 271 aa16.61■□□□□ 0.25
PMS1-214ENST00000446877 IAH1Q2TAA2 248 aaPredicted RBP16.61■□□□□ 0.25
PMS1-214ENST00000446877 ANXA2RQ3ZCQ2 193 aa16.61■□□□□ 0.25
PMS1-214ENST00000446877 ST6GAL2Q96JF0 529 aa16.61■□□□□ 0.25
PMS1-214ENST00000446877 LINC00467Q9BRT7 94 aa16.61■□□□□ 0.25
PMS1-214ENST00000446877 GSKIPQ9P0R6 139 aa16.61■□□□□ 0.25
PMS1-214ENST00000446877 PRO0255Q9UI72 69 aa16.61■□□□□ 0.25
PMS1-214ENST00000446877 KLF12Q9Y4X4 402 aa16.61■□□□□ 0.25
PMS1-214ENST00000446877 SRRM2Q9UQ35 2752 aaKnown RBP16.61■□□□□ 0.25
PMS1-214ENST00000446877 SPINK4O60575 86 aa16.6■□□□□ 0.25
PMS1-214ENST00000446877 IGHV3-53P01767 116 aa16.6■□□□□ 0.25
PMS1-214ENST00000446877 DNAH10OSP0CZ25 163 aa16.6■□□□□ 0.25
PMS1-214ENST00000446877 RNASE4P34096 147 aaKnown RBP16.6■□□□□ 0.25
PMS1-214ENST00000446877 CAMLGP49069 296 aa16.6■□□□□ 0.25
PMS1-214ENST00000446877 ARL16Q0P5N6 197 aa16.6■□□□□ 0.25
PMS1-214ENST00000446877 LYPD5Q6UWN5 251 aa16.6■□□□□ 0.25
PMS1-214ENST00000446877 V9GYH0 126 aa16.6■□□□□ 0.25
PMS1-214ENST00000446877 TRAV5A0A0B4J249 113 aa16.59■□□□□ 0.25
PMS1-214ENST00000446877 FAM229AH3BQW9 127 aa16.59■□□□□ 0.25
PMS1-214ENST00000446877 SMR3BP02814 79 aaPredicted RBP16.59■□□□□ 0.25
PMS1-214ENST00000446877 OR4E1P0C645 316 aa16.59■□□□□ 0.25
PMS1-214ENST00000446877 ERCC8Q13216 396 aa16.59■□□□□ 0.25
PMS1-214ENST00000446877 MRPL23Q16540 153 aaKnown RBP16.59■□□□□ 0.25
PMS1-214ENST00000446877 OR1L4Q8NGR5 311 aa16.59■□□□□ 0.25
PMS1-214ENST00000446877 MRPL53Q96EL3 112 aaKnown RBP16.59■□□□□ 0.25
PMS1-214ENST00000446877 LINC00477Q96M19 166 aa16.59■□□□□ 0.25
PMS1-214ENST00000446877 HHLA3Q9XRX5 114 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms